Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.53□□□□□ -2.32
ZNF394Q53GI3 RNA5SP128-201ENST00000365305 116 ntBASIC0.53□□□□□ -2.32
ZNF394Q53GI3 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
ZNF394Q53GI3 RNU7-24P-201ENST00000458867 62 ntBASIC0.53□□□□□ -2.32
ZNF394Q53GI3 AC243829.3-201ENST00000622177 108 ntBASIC0.53□□□□□ -2.32
ZNF394Q53GI3 SNORA9.1-201ENST00000362412 131 ntBASIC0.52□□□□□ -2.33
ZNF394Q53GI3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.52□□□□□ -2.33
ZNF394Q53GI3 Y_RNA.437-201ENST00000384113 113 ntBASIC0.52□□□□□ -2.33
ZNF394Q53GI3 RNU6-380P-201ENST00000410207 107 ntBASIC0.52□□□□□ -2.33
ZNF394Q53GI3 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
ZNF394Q53GI3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.51□□□□□ -2.33
ZNF394Q53GI3 SNORA72.7-201ENST00000516349 94 ntBASIC0.51□□□□□ -2.33
ZNF394Q53GI3 MIR4666B-201ENST00000578142 81 ntBASIC0.51□□□□□ -2.33
ZNF394Q53GI3 AC010487.4-201ENST00000637027 61 ntBASIC0.51□□□□□ -2.33
ZNF394Q53GI3 RNU6-681P-201ENST00000364012 104 ntBASIC0.5□□□□□ -2.33
ZNF394Q53GI3 SNORD75.2-201ENST00000408784 58 ntBASIC0.5□□□□□ -2.33
ZNF394Q53GI3 HMGN2P22-201ENST00000427588 175 ntBASIC0.5□□□□□ -2.33
ZNF394Q53GI3 snoU13.17-201ENST00000458802 104 ntBASIC0.5□□□□□ -2.33
ZNF394Q53GI3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.5□□□□□ -2.33
ZNF394Q53GI3 RNU6-315P-201ENST00000362666 107 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 RNU6-495P-201ENST00000362995 107 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 RNU6-686P-201ENST00000364839 107 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 RNU6-54P-201ENST00000365563 107 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 Y_RNA.606-201ENST00000410579 103 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 MIR1273G-201ENST00000577677 100 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 U6.81-201ENST00000612550 106 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 uc_338.10-201ENST00000621872 182 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 MIR3202-2-201ENST00000635980 79 ntBASIC0.49□□□□□ -2.33
ZNF394Q53GI3 RNA5SP62-201ENST00000363457 110 ntBASIC0.48□□□□□ -2.33
ZNF394Q53GI3 Y_RNA.316-201ENST00000365118 111 ntBASIC0.48□□□□□ -2.33
ZNF394Q53GI3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.48□□□□□ -2.33
ZNF394Q53GI3 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
ZNF394Q53GI3 MIR548AD-201ENST00000584780 82 ntBASIC0.48□□□□□ -2.33
ZNF394Q53GI3 RNU6-161P-201ENST00000363051 106 ntBASIC0.47□□□□□ -2.33
ZNF394Q53GI3 Y_RNA.388-201ENST00000383919 113 ntBASIC0.47□□□□□ -2.33
ZNF394Q53GI3 AC073261.1-201ENST00000429409 121 ntBASIC0.47□□□□□ -2.33
ZNF394Q53GI3 YWHAEP3-201ENST00000582767 121 ntBASIC0.47□□□□□ -2.33
ZNF394Q53GI3 MIR4473-201ENST00000583731 91 ntBASIC0.47□□□□□ -2.33
ZNF394Q53GI3 MIR501-201ENST00000390204 84 ntBASIC0.46□□□□□ -2.34
ZNF394Q53GI3 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
ZNF394Q53GI3 RNU6-274P-201ENST00000459566 107 ntBASIC0.45□□□□□ -2.34
ZNF394Q53GI3 RNU7-129P-201ENST00000516128 62 ntBASIC0.45□□□□□ -2.34
ZNF394Q53GI3 AC069113.3-201ENST00000521019 150 ntBASIC0.45□□□□□ -2.34
ZNF394Q53GI3 MIR4677-201ENST00000584153 80 ntBASIC0.45□□□□□ -2.34
ZNF394Q53GI3 MIR1245B-201ENST00000636115 69 ntBASIC0.45□□□□□ -2.34
ZNF394Q53GI3 MIRLET7A1-201ENST00000362295 80 ntBASIC0.44□□□□□ -2.34
ZNF394Q53GI3 RNU6-824P-201ENST00000363724 104 ntBASIC0.44□□□□□ -2.34
ZNF394Q53GI3 Y_RNA.219-201ENST00000364232 113 ntBASIC0.44□□□□□ -2.34
ZNF394Q53GI3 RNA5SP173-201ENST00000364857 136 ntBASIC0.44□□□□□ -2.34
ZNF394Q53GI3 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
ZNF394Q53GI3 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
ZNF394Q53GI3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.43□□□□□ -2.34
ZNF394Q53GI3 RNU6-340P-201ENST00000364005 107 ntBASIC0.43□□□□□ -2.34
ZNF394Q53GI3 RNU6-652P-201ENST00000365488 107 ntBASIC0.43□□□□□ -2.34
ZNF394Q53GI3 AC108740.1-201ENST00000498629 225 ntBASIC0.43□□□□□ -2.34
ZNF394Q53GI3 RNU6-752P-201ENST00000516376 102 ntBASIC0.43□□□□□ -2.34
ZNF394Q53GI3 MIR924-201ENST00000638017 53 ntBASIC0.43□□□□□ -2.34
ZNF394Q53GI3 RNU6-478P-201ENST00000363904 110 ntBASIC0.42□□□□□ -2.34
ZNF394Q53GI3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.42□□□□□ -2.34
ZNF394Q53GI3 MIR4315-1-201ENST00000636800 73 ntBASIC0.42□□□□□ -2.34
ZNF394Q53GI3 MIR4315-2-201ENST00000640925 73 ntBASIC0.42□□□□□ -2.34
ZNF394Q53GI3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
ZNF394Q53GI3 RNA5SP325-201ENST00000363756 130 ntBASIC0.41□□□□□ -2.34
ZNF394Q53GI3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.41□□□□□ -2.34
ZNF394Q53GI3 RNU6-382P-201ENST00000365181 106 ntBASIC0.41□□□□□ -2.34
ZNF394Q53GI3 RNU6-815P-201ENST00000384080 113 ntBASIC0.41□□□□□ -2.34
ZNF394Q53GI3 RNA5SP134-201ENST00000516492 96 ntBASIC0.41□□□□□ -2.34
ZNF394Q53GI3 RNU6-303P-201ENST00000517091 106 ntBASIC0.41□□□□□ -2.34
ZNF394Q53GI3 MIR4773-1-201ENST00000637203 78 ntBASIC0.41□□□□□ -2.34
ZNF394Q53GI3 MIR1297-201ENST00000637311 77 ntBASIC0.41□□□□□ -2.34
ZNF394Q53GI3 Y_RNA.371-201ENST00000365591 113 ntBASIC0.4□□□□□ -2.35
ZNF394Q53GI3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
ZNF394Q53GI3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.4□□□□□ -2.35
ZNF394Q53GI3 SNORD114-29-201ENST00000364819 70 ntBASIC0.39□□□□□ -2.35
ZNF394Q53GI3 RNU6-154P-201ENST00000384306 106 ntBASIC0.39□□□□□ -2.35
ZNF394Q53GI3 SNORD42B-201ENST00000458893 67 ntBASIC0.39□□□□□ -2.35
ZNF394Q53GI3 RNU6-782P-201ENST00000516852 104 ntBASIC0.39□□□□□ -2.35
ZNF394Q53GI3 MIR548AE1-201ENST00000583292 70 ntBASIC0.39□□□□□ -2.35
ZNF394Q53GI3 RNU6-1094P-201ENST00000362416 104 ntBASIC0.38□□□□□ -2.35
ZNF394Q53GI3 MIR516B1-201ENST00000385211 90 ntBASIC0.38□□□□□ -2.35
ZNF394Q53GI3 SNORA75.1-201ENST00000391130 148 ntBASIC0.38□□□□□ -2.35
ZNF394Q53GI3 RNU6-807P-201ENST00000516805 107 ntBASIC0.38□□□□□ -2.35
ZNF394Q53GI3 MIR4712-201ENST00000583750 82 ntBASIC0.38□□□□□ -2.35
ZNF394Q53GI3 AC084368.1-201ENST00000620935 65 ntBASIC0.38□□□□□ -2.35
ZNF394Q53GI3 MIR499B-201ENST00000636498 73 ntBASIC0.38□□□□□ -2.35
ZNF394Q53GI3 MIR20A-201ENST00000362279 71 ntBASIC0.36□□□□□ -2.35
ZNF394Q53GI3 Y_RNA.313-201ENST00000365095 103 ntBASIC0.36□□□□□ -2.35
ZNF394Q53GI3 RNU6-573P-201ENST00000383938 106 ntBASIC0.36□□□□□ -2.35
ZNF394Q53GI3 MIR652-201ENST00000385278 98 ntBASIC0.36□□□□□ -2.35
ZNF394Q53GI3 RNU6-127P-201ENST00000390897 107 ntBASIC0.36□□□□□ -2.35
ZNF394Q53GI3 MIR892B-201ENST00000401279 77 ntBASIC0.36□□□□□ -2.35
ZNF394Q53GI3 MIR8087-201ENST00000612745 78 ntBASIC0.36□□□□□ -2.35
ZNF394Q53GI3 RNU6-787P-201ENST00000384032 107 ntBASIC0.35□□□□□ -2.35
ZNF394Q53GI3 MIR876-201ENST00000401147 81 ntBASIC0.35□□□□□ -2.35
ZNF394Q53GI3 AC244090.1-201ENST00000441884 93 ntBASIC0.35□□□□□ -2.35
ZNF394Q53GI3 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
ZNF394Q53GI3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
ZNF394Q53GI3 MIR330-201ENST00000362196 94 ntBASIC0.34□□□□□ -2.36
ZNF394Q53GI3 AL691482.2-201ENST00000457453 84 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms