Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 SNORD79.1-201ENST00000516069 84 ntBASIC2.09□□□□□ -2.07
EMP3P54852 RNU6-910P-201ENST00000390844 107 ntBASIC2.08□□□□□ -2.08
EMP3P54852 MIR3678-201ENST00000578455 94 ntBASIC2.08□□□□□ -2.08
EMP3P54852 MIR4648-201ENST00000580107 72 ntBASIC2.08□□□□□ -2.08
EMP3P54852 MIR4781-201ENST00000585250 76 ntBASIC2.08□□□□□ -2.08
EMP3P54852 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC2.08□□□□□ -2.08
EMP3P54852 MIR6873-201ENST00000622788 63 ntBASIC2.08□□□□□ -2.08
EMP3P54852 MIR219B-201ENST00000637023 88 ntBASIC2.08□□□□□ -2.08
EMP3P54852 RNA5SP432-201ENST00000362480 116 ntBASIC2.07□□□□□ -2.08
EMP3P54852 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
EMP3P54852 AC244090.1-201ENST00000441884 93 ntBASIC2.07□□□□□ -2.08
EMP3P54852 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.07□□□□□ -2.08
EMP3P54852 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.07□□□□□ -2.08
EMP3P54852 MIR6828-201ENST00000636181 60 ntBASIC2.07□□□□□ -2.08
EMP3P54852 MIRLET7B-201ENST00000385140 83 ntBASIC2.06□□□□□ -2.08
EMP3P54852 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.06□□□□□ -2.08
EMP3P54852 SNORA49-201ENST00000386157 136 ntBASIC2.05□□□□□ -2.08
EMP3P54852 RNU6-530P-201ENST00000391180 107 ntBASIC2.05□□□□□ -2.08
EMP3P54852 MIR1261-201ENST00000408659 82 ntBASIC2.05□□□□□ -2.08
EMP3P54852 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
EMP3P54852 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.04□□□□□ -2.08
EMP3P54852 SNORD23.1-201ENST00000408212 104 ntBASIC2.04□□□□□ -2.08
EMP3P54852 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC2.04□□□□□ -2.08
EMP3P54852 RNU6-1223P-201ENST00000517124 104 ntBASIC2.04□□□□□ -2.08
EMP3P54852 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.03□□□□□ -2.08
EMP3P54852 MIR20A-201ENST00000362279 71 ntBASIC2.03□□□□□ -2.08
EMP3P54852 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
EMP3P54852 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
EMP3P54852 AC245884.12-201ENST00000615364 59 ntBASIC2.03□□□□□ -2.08
EMP3P54852 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
EMP3P54852 SNORD57-201ENST00000448188 72 ntBASIC2.02□□□□□ -2.09
EMP3P54852 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EMP3P54852 AL354695.1-201ENST00000427935 228 ntBASIC2.01□□□□□ -2.09
EMP3P54852 MIR6507-201ENST00000613630 70 ntBASIC2.01□□□□□ -2.09
EMP3P54852 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
EMP3P54852 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
EMP3P54852 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
EMP3P54852 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
EMP3P54852 RNY1P8-201ENST00000383970 114 ntBASIC2□□□□□ -2.09
EMP3P54852 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
EMP3P54852 MIR30A-201ENST00000385092 71 ntBASIC2□□□□□ -2.09
EMP3P54852 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2□□□□□ -2.09
EMP3P54852 SNORD63.2-201ENST00000516303 64 ntBASIC2□□□□□ -2.09
EMP3P54852 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
EMP3P54852 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
EMP3P54852 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2□□□□□ -2.09
EMP3P54852 MIR6715A-201ENST00000615929 79 ntBASIC2□□□□□ -2.09
EMP3P54852 MIR4317-201ENST00000637586 65 ntBASIC2□□□□□ -2.09
EMP3P54852 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
EMP3P54852 RNU6-1047P-201ENST00000364418 107 ntBASIC1.99□□□□□ -2.09
EMP3P54852 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
EMP3P54852 SNORD2-201ENST00000459163 69 ntBASIC1.99□□□□□ -2.09
EMP3P54852 RNA5SP227-201ENST00000516184 113 ntBASIC1.99□□□□□ -2.09
EMP3P54852 MIR3124-201ENST00000582636 67 ntBASIC1.99□□□□□ -2.09
EMP3P54852 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
EMP3P54852 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
EMP3P54852 HMGN2P22-201ENST00000427588 175 ntBASIC1.98□□□□□ -2.09
EMP3P54852 SNORA70.25-201ENST00000612741 95 ntBASIC1.98□□□□□ -2.09
EMP3P54852 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
EMP3P54852 SNORD114-1-201ENST00000362705 72 ntBASIC1.97□□□□□ -2.09
EMP3P54852 snoU13.15-201ENST00000459407 104 ntBASIC1.97□□□□□ -2.09
EMP3P54852 RNU6-1110P-201ENST00000516462 101 ntBASIC1.97□□□□□ -2.09
EMP3P54852 AC104984.5-201ENST00000586878 94 ntBASIC1.97□□□□□ -2.09
EMP3P54852 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
EMP3P54852 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
EMP3P54852 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
EMP3P54852 SNORD105-201ENST00000386910 85 ntBASIC1.96□□□□□ -2.1
EMP3P54852 RNU6-782P-201ENST00000516852 104 ntBASIC1.96□□□□□ -2.1
EMP3P54852 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
EMP3P54852 AL353803.5-201ENST00000599815 141 ntBASIC1.96□□□□□ -2.1
EMP3P54852 Y_RNA.698-201ENST00000516798 118 ntBASIC1.95□□□□□ -2.1
EMP3P54852 MIR3612-201ENST00000579753 87 ntBASIC1.95□□□□□ -2.1
EMP3P54852 RNU6-502P-201ENST00000362419 108 ntBASIC1.94□□□□□ -2.1
EMP3P54852 SNORA36.1-201ENST00000363424 132 ntBASIC1.94□□□□□ -2.1
EMP3P54852 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
EMP3P54852 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
EMP3P54852 MIR573-201ENST00000384964 99 ntBASIC1.93□□□□□ -2.1
EMP3P54852 SNORD89-201ENST00000390981 114 ntBASIC1.93□□□□□ -2.1
EMP3P54852 snoU13.26-201ENST00000459452 105 ntBASIC1.93□□□□□ -2.1
EMP3P54852 U7.5-201ENST00000517224 61 ntBASIC1.93□□□□□ -2.1
EMP3P54852 MIR4432-201ENST00000581823 84 ntBASIC1.93□□□□□ -2.1
EMP3P54852 AC108676.2-201ENST00000605225 163 ntBASIC1.93□□□□□ -2.1
EMP3P54852 MIR3170-201ENST00000582699 77 ntBASIC1.92□□□□□ -2.1
EMP3P54852 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
EMP3P54852 RNA5SP182-201ENST00000516064 82 ntBASIC1.91□□□□□ -2.1
EMP3P54852 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
EMP3P54852 Y_RNA.321-201ENST00000365149 102 ntBASIC1.9□□□□□ -2.11
EMP3P54852 SNORD12-201ENST00000391002 90 ntBASIC1.9□□□□□ -2.11
EMP3P54852 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
EMP3P54852 RNU7-88P-201ENST00000458752 63 ntBASIC1.9□□□□□ -2.11
EMP3P54852 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
EMP3P54852 SNORD63.1-201ENST00000516178 80 ntBASIC1.9□□□□□ -2.11
EMP3P54852 RNU6-1174P-201ENST00000517278 101 ntBASIC1.9□□□□□ -2.11
EMP3P54852 MIR7107-201ENST00000611489 80 ntBASIC1.9□□□□□ -2.11
EMP3P54852 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
EMP3P54852 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
EMP3P54852 RNU4-62P-201ENST00000410125 130 ntBASIC1.89□□□□□ -2.11
EMP3P54852 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
EMP3P54852 SNORA70.22-201ENST00000517160 124 ntBASIC1.89□□□□□ -2.11
EMP3P54852 MIR4752-201ENST00000579672 72 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 268.9 ms