Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 RNU6-184P-201ENST00000516514 107 ntBASIC-0.2□□□□□ -2.44
TNFRSF4P43489 MIR101-1-201ENST00000362265 75 ntBASIC-0.21□□□□□ -2.44
TNFRSF4P43489 SNORD58A-201ENST00000383875 65 ntBASIC-0.21□□□□□ -2.44
TNFRSF4P43489 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.21□□□□□ -2.44
TNFRSF4P43489 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.21□□□□□ -2.44
TNFRSF4P43489 MIR604-201ENST00000384880 94 ntBASIC-0.21□□□□□ -2.44
TNFRSF4P43489 AL606753.1-201ENST00000427435 87 ntBASIC-0.21□□□□□ -2.44
TNFRSF4P43489 RNU4-32P-201ENST00000363404 141 ntBASIC-0.22□□□□□ -2.44
TNFRSF4P43489 SNORD116-10-201ENST00000363791 102 ntBASIC-0.22□□□□□ -2.44
TNFRSF4P43489 RNA5SP368-201ENST00000364298 116 ntBASIC-0.22□□□□□ -2.44
TNFRSF4P43489 SNORD49B-201ENST00000365172 72 ntBASIC-0.22□□□□□ -2.44
TNFRSF4P43489 RNU6-162P-201ENST00000516228 103 ntBASIC-0.22□□□□□ -2.44
TNFRSF4P43489 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.22□□□□□ -2.44
TNFRSF4P43489 RNU6-537P-201ENST00000517277 103 ntBASIC-0.22□□□□□ -2.44
TNFRSF4P43489 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.22□□□□□ -2.44
TNFRSF4P43489 RNU6-766P-201ENST00000362478 107 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 SNORA63.2-201ENST00000362603 126 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 SNORA18.1-201ENST00000363418 128 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 AC244090.1-201ENST00000441884 93 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 RNU6-175P-201ENST00000516896 107 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 AC108676.2-201ENST00000605225 163 ntBASIC-0.23□□□□□ -2.45
TNFRSF4P43489 RNA5SP292-201ENST00000390974 118 ntBASIC-0.24□□□□□ -2.45
TNFRSF4P43489 AL031737.1-201ENST00000450125 223 ntBASIC-0.24□□□□□ -2.45
TNFRSF4P43489 MIR3140-201ENST00000583685 90 ntBASIC-0.24□□□□□ -2.45
TNFRSF4P43489 SNORD114-4-201ENST00000363962 75 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 SNORD114-15-201ENST00000364687 72 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 RNY4P3-201ENST00000365254 95 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 SNORD113-1-201ENST00000365321 69 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 RNU4-61P-201ENST00000411243 107 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 AC244250.2-201ENST00000418731 148 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 RNU6-320P-201ENST00000516511 106 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 SNORA18.5-201ENST00000516616 101 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 RNU6-789P-201ENST00000517105 102 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 U7.3-201ENST00000616123 62 ntBASIC-0.25□□□□□ -2.45
TNFRSF4P43489 MIR450A1-201ENST00000362262 91 ntBASIC-0.26□□□□□ -2.45
TNFRSF4P43489 SNORD95.1-201ENST00000364099 68 ntBASIC-0.26□□□□□ -2.45
TNFRSF4P43489 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.26□□□□□ -2.45
TNFRSF4P43489 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.26□□□□□ -2.45
TNFRSF4P43489 MTATP6P29-201ENST00000415057 132 ntBASIC-0.26□□□□□ -2.45
TNFRSF4P43489 AC026421.1-201ENST00000519101 163 ntBASIC-0.26□□□□□ -2.45
TNFRSF4P43489 MIR8064-201ENST00000612863 90 ntBASIC-0.26□□□□□ -2.45
TNFRSF4P43489 MIR6507-201ENST00000613630 70 ntBASIC-0.26□□□□□ -2.45
TNFRSF4P43489 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.27□□□□□ -2.45
TNFRSF4P43489 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.27□□□□□ -2.45
TNFRSF4P43489 RNA5SP451-201ENST00000410588 110 ntBASIC-0.27□□□□□ -2.45
TNFRSF4P43489 RPS29P8-201ENST00000445109 171 ntBASIC-0.27□□□□□ -2.45
TNFRSF4P43489 snoU13.19-201ENST00000459148 104 ntBASIC-0.27□□□□□ -2.45
TNFRSF4P43489 AP000676.1-201ENST00000533307 52 ntBASIC-0.27□□□□□ -2.45
TNFRSF4P43489 SNORD42B-201ENST00000458893 67 ntBASIC-0.28□□□□□ -2.45
TNFRSF4P43489 MIR3666-201ENST00000607845 111 ntBASIC-0.28□□□□□ -2.45
TNFRSF4P43489 RNA5SP275-201ENST00000363936 118 ntBASIC-0.29□□□□□ -2.46
TNFRSF4P43489 RNY4P18-201ENST00000391107 89 ntBASIC-0.29□□□□□ -2.46
TNFRSF4P43489 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.29□□□□□ -2.46
TNFRSF4P43489 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.29□□□□□ -2.46
TNFRSF4P43489 MIR4263-201ENST00000584745 83 ntBASIC-0.29□□□□□ -2.46
TNFRSF4P43489 RNU5F-1-201ENST00000362507 117 ntBASIC-0.3□□□□□ -2.46
TNFRSF4P43489 RNU6-455P-201ENST00000384681 107 ntBASIC-0.3□□□□□ -2.46
TNFRSF4P43489 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.3□□□□□ -2.46
TNFRSF4P43489 MIR548E-201ENST00000408287 88 ntBASIC-0.3□□□□□ -2.46
TNFRSF4P43489 AC096531.1-201ENST00000419107 107 ntBASIC-0.3□□□□□ -2.46
TNFRSF4P43489 MIR582-201ENST00000365731 98 ntBASIC-0.31□□□□□ -2.46
TNFRSF4P43489 SNORA32.3-201ENST00000384772 121 ntBASIC-0.31□□□□□ -2.46
TNFRSF4P43489 SNORD90-201ENST00000391145 111 ntBASIC-0.31□□□□□ -2.46
TNFRSF4P43489 MTATP8P2-201ENST00000435212 202 ntBASIC-0.31□□□□□ -2.46
TNFRSF4P43489 SNORD2-201ENST00000459163 69 ntBASIC-0.31□□□□□ -2.46
TNFRSF4P43489 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.32□□□□□ -2.46
TNFRSF4P43489 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.32□□□□□ -2.46
TNFRSF4P43489 RNU6-30P-201ENST00000384561 107 ntBASIC-0.32□□□□□ -2.46
TNFRSF4P43489 MIR224-201ENST00000384889 81 ntBASIC-0.32□□□□□ -2.46
TNFRSF4P43489 MIR4796-201ENST00000580742 81 ntBASIC-0.32□□□□□ -2.46
TNFRSF4P43489 MIR2052-201ENST00000636055 55 ntBASIC-0.32□□□□□ -2.46
TNFRSF4P43489 MIR4788-201ENST00000639104 80 ntBASIC-0.32□□□□□ -2.46
TNFRSF4P43489 SNORD115-25-201ENST00000362619 82 ntBASIC-0.33□□□□□ -2.46
TNFRSF4P43489 RNU6-495P-201ENST00000362995 107 ntBASIC-0.33□□□□□ -2.46
TNFRSF4P43489 SNORA24B-201ENST00000384176 131 ntBASIC-0.33□□□□□ -2.46
TNFRSF4P43489 MIR1236-201ENST00000408340 102 ntBASIC-0.33□□□□□ -2.46
TNFRSF4P43489 RNU6-158P-201ENST00000517104 100 ntBASIC-0.33□□□□□ -2.46
TNFRSF4P43489 MIR655-201ENST00000362159 97 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 SNORA63.4-201ENST00000362763 126 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 SNORA49-201ENST00000386157 136 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 RNA5SP300-201ENST00000391197 107 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 SNORD75.2-201ENST00000408784 58 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 AC097510.1-201ENST00000510945 133 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 RNU6-406P-201ENST00000516470 107 ntBASIC-0.34□□□□□ -2.46
TNFRSF4P43489 RNU6-901P-201ENST00000384593 106 ntBASIC-0.35□□□□□ -2.47
TNFRSF4P43489 MIR548AI-201ENST00000579940 88 ntBASIC-0.35□□□□□ -2.47
TNFRSF4P43489 MIR548AZ-201ENST00000616567 95 ntBASIC-0.35□□□□□ -2.47
TNFRSF4P43489 SNORA63.6-201ENST00000364921 119 ntBASIC-0.36□□□□□ -2.47
TNFRSF4P43489 MT-TQ-201ENST00000387372 72 ntBASIC-0.36□□□□□ -2.47
TNFRSF4P43489 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
TNFRSF4P43489 SNORA40.13-201ENST00000516379 120 ntBASIC-0.36□□□□□ -2.47
TNFRSF4P43489 AC006254.2-201ENST00000603259 279 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 229 ms