Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC093423.1-201ENST00000440817 142 ntBASIC0.28□□□□□ -2.36
COL15A1P39059 RNU6-1232P-201ENST00000516299 86 ntBASIC0.28□□□□□ -2.36
COL15A1P39059 RNU6-719P-201ENST00000516671 104 ntBASIC0.28□□□□□ -2.36
COL15A1P39059 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
COL15A1P39059 MIR499B-201ENST00000636498 73 ntBASIC0.28□□□□□ -2.36
COL15A1P39059 SNORD114-31-201ENST00000363219 75 ntBASIC0.27□□□□□ -2.37
COL15A1P39059 RNA5SP292-201ENST00000390974 118 ntBASIC0.27□□□□□ -2.37
COL15A1P39059 SNORA18.5-201ENST00000516616 101 ntBASIC0.27□□□□□ -2.37
COL15A1P39059 RNY1P7-201ENST00000384743 110 ntBASIC0.26□□□□□ -2.37
COL15A1P39059 MT-TY-201ENST00000387409 66 ntBASIC0.26□□□□□ -2.37
COL15A1P39059 MTATP6P29-201ENST00000415057 132 ntBASIC0.26□□□□□ -2.37
COL15A1P39059 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
COL15A1P39059 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.26□□□□□ -2.37
COL15A1P39059 RNU5B-6P-201ENST00000516765 68 ntBASIC0.26□□□□□ -2.37
COL15A1P39059 MIR4668-201ENST00000582284 70 ntBASIC0.26□□□□□ -2.37
COL15A1P39059 MIR4473-201ENST00000583731 91 ntBASIC0.26□□□□□ -2.37
COL15A1P39059 RNU6-1131P-201ENST00000364955 107 ntBASIC0.25□□□□□ -2.37
COL15A1P39059 MIR4315-1-201ENST00000636800 73 ntBASIC0.25□□□□□ -2.37
COL15A1P39059 MIR4315-2-201ENST00000640925 73 ntBASIC0.25□□□□□ -2.37
COL15A1P39059 Y_RNA.125-201ENST00000363371 111 ntBASIC0.24□□□□□ -2.37
COL15A1P39059 Y_RNA.694-201ENST00000516677 117 ntBASIC0.24□□□□□ -2.37
COL15A1P39059 RNU6-652P-201ENST00000365488 107 ntBASIC0.23□□□□□ -2.37
COL15A1P39059 MIR519C-201ENST00000385053 87 ntBASIC0.23□□□□□ -2.37
COL15A1P39059 MIR501-201ENST00000390204 84 ntBASIC0.23□□□□□ -2.37
COL15A1P39059 HMGN2P22-201ENST00000427588 175 ntBASIC0.23□□□□□ -2.37
COL15A1P39059 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
COL15A1P39059 MIR101-1-201ENST00000362265 75 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 SNORA63.2-201ENST00000362603 126 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 SNORD115-37-201ENST00000363768 82 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 RNU6-1134P-201ENST00000365156 101 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 RNU6-1051P-201ENST00000365471 102 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 RNU6V-201ENST00000384105 107 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 SNORA25.13-201ENST00000516395 103 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 MIR548O2-201ENST00000616090 70 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 uc_338.10-201ENST00000621872 182 ntBASIC0.22□□□□□ -2.37
COL15A1P39059 MIR643-201ENST00000385267 97 ntBASIC0.21□□□□□ -2.38
COL15A1P39059 RNU6-127P-201ENST00000390897 107 ntBASIC0.21□□□□□ -2.38
COL15A1P39059 MIR4796-201ENST00000580742 81 ntBASIC0.21□□□□□ -2.38
COL15A1P39059 MIR4677-201ENST00000584153 80 ntBASIC0.21□□□□□ -2.38
COL15A1P39059 MIR548AD-201ENST00000584780 82 ntBASIC0.21□□□□□ -2.38
COL15A1P39059 MIR4768-201ENST00000585270 74 ntBASIC0.21□□□□□ -2.38
COL15A1P39059 RNU6-402P-201ENST00000410678 103 ntBASIC0.2□□□□□ -2.38
COL15A1P39059 RPS29P8-201ENST00000445109 171 ntBASIC0.2□□□□□ -2.38
COL15A1P39059 RNU6-844P-201ENST00000517175 102 ntBASIC0.2□□□□□ -2.38
COL15A1P39059 MIR3140-201ENST00000583685 90 ntBASIC0.2□□□□□ -2.38
COL15A1P39059 RNU5F-1-201ENST00000362507 117 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 RNU6-633P-201ENST00000362612 103 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 Y_RNA.407-201ENST00000383986 113 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 MIR516B1-201ENST00000385211 90 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 Y_RNA.620-201ENST00000411009 88 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 SNORD57-201ENST00000448188 72 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 AC084368.1-201ENST00000620935 65 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 SNORD115-27-201ENST00000364430 82 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 RNU6-49P-201ENST00000384256 107 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 Y_RNA.558-201ENST00000384685 113 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 RNU7-153P-201ENST00000516455 62 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 MIR548AX-201ENST00000580117 73 ntBASIC0.19□□□□□ -2.38
COL15A1P39059 MIR610-201ENST00000385139 96 ntBASIC0.18□□□□□ -2.38
COL15A1P39059 SNORD49B-201ENST00000365172 72 ntBASIC0.16□□□□□ -2.38
COL15A1P39059 RNU6-54P-201ENST00000365563 107 ntBASIC0.16□□□□□ -2.38
COL15A1P39059 Y_RNA.437-201ENST00000384113 113 ntBASIC0.16□□□□□ -2.38
COL15A1P39059 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
COL15A1P39059 RNU6-782P-201ENST00000516852 104 ntBASIC0.16□□□□□ -2.38
COL15A1P39059 RNY1P9-201ENST00000532431 109 ntBASIC0.16□□□□□ -2.38
COL15A1P39059 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
COL15A1P39059 RNU6-154P-201ENST00000384306 106 ntBASIC0.15□□□□□ -2.39
COL15A1P39059 SNORA75.1-201ENST00000391130 148 ntBASIC0.15□□□□□ -2.39
COL15A1P39059 SNORD90-201ENST00000391145 111 ntBASIC0.15□□□□□ -2.39
COL15A1P39059 MIR892B-201ENST00000401279 77 ntBASIC0.15□□□□□ -2.39
COL15A1P39059 RNU6-267P-201ENST00000516714 103 ntBASIC0.15□□□□□ -2.39
COL15A1P39059 RNU6-762P-201ENST00000517107 102 ntBASIC0.15□□□□□ -2.39
COL15A1P39059 AC104408.1-201ENST00000605241 170 ntBASIC0.15□□□□□ -2.39
COL15A1P39059 SNORD114-4-201ENST00000363962 75 ntBASIC0.14□□□□□ -2.39
COL15A1P39059 RNU6-219P-201ENST00000364728 107 ntBASIC0.14□□□□□ -2.39
COL15A1P39059 RNU6-1177P-201ENST00000391058 104 ntBASIC0.14□□□□□ -2.39
COL15A1P39059 SCARNA11.2-201ENST00000517183 154 ntBASIC0.14□□□□□ -2.39
COL15A1P39059 MIR548AE1-201ENST00000583292 70 ntBASIC0.14□□□□□ -2.39
COL15A1P39059 IGLL4P-201ENST00000614590 133 ntBASIC0.14□□□□□ -2.39
COL15A1P39059 Y_RNA.17-201ENST00000362433 111 ntBASIC0.13□□□□□ -2.39
COL15A1P39059 AC093729.1-201ENST00000513074 128 ntBASIC0.13□□□□□ -2.39
COL15A1P39059 MIR3925-201ENST00000584674 77 ntBASIC0.13□□□□□ -2.39
COL15A1P39059 SNORA42.1-201ENST00000363515 137 ntBASIC0.12□□□□□ -2.39
COL15A1P39059 SNORD114-29-201ENST00000364819 70 ntBASIC0.12□□□□□ -2.39
COL15A1P39059 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
COL15A1P39059 Y_RNA.611-201ENST00000410682 108 ntBASIC0.12□□□□□ -2.39
COL15A1P39059 Y_RNA.660-201ENST00000516002 120 ntBASIC0.12□□□□□ -2.39
COL15A1P39059 MIR5582-201ENST00000579697 68 ntBASIC0.12□□□□□ -2.39
COL15A1P39059 MIR4645-201ENST00000583158 77 ntBASIC0.12□□□□□ -2.39
COL15A1P39059 MIR371B-201ENST00000638082 66 ntBASIC0.12□□□□□ -2.39
COL15A1P39059 RNY1P1-201ENST00000364372 112 ntBASIC0.11□□□□□ -2.39
COL15A1P39059 RNU6-294P-201ENST00000364999 102 ntBASIC0.11□□□□□ -2.39
COL15A1P39059 MIR593-201ENST00000384856 100 ntBASIC0.11□□□□□ -2.39
COL15A1P39059 RNA5SP170-201ENST00000517150 101 ntBASIC0.11□□□□□ -2.39
COL15A1P39059 MIR652-201ENST00000385278 98 ntBASIC0.1□□□□□ -2.39
COL15A1P39059 AL450471.1-201ENST00000447509 127 ntBASIC0.1□□□□□ -2.39
COL15A1P39059 RNU7-188P-201ENST00000517063 64 ntBASIC0.1□□□□□ -2.39
COL15A1P39059 MIR548BB-201ENST00000626714 66 ntBASIC0.1□□□□□ -2.39
COL15A1P39059 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.39
COL15A1P39059 SNORA24B-201ENST00000384176 131 ntBASIC0.09□□□□□ -2.39
COL15A1P39059 MIR4667-201ENST00000578933 66 ntBASIC0.09□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms