Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNA5SP268-201ENST00000516828 124 ntBASIC0.49□□□□□ -2.33
KRT9P35527 RNA5SP94-201ENST00000516917 108 ntBASIC0.49□□□□□ -2.33
KRT9P35527 YWHAEP2-201ENST00000580066 112 ntBASIC0.49□□□□□ -2.33
KRT9P35527 YWHAEP3-201ENST00000582767 121 ntBASIC0.49□□□□□ -2.33
KRT9P35527 MIR4712-201ENST00000583750 82 ntBASIC0.49□□□□□ -2.33
KRT9P35527 SNORA25.18-201ENST00000607153 114 ntBASIC0.49□□□□□ -2.33
KRT9P35527 MIR2909-201ENST00000617113 69 ntBASIC0.49□□□□□ -2.33
KRT9P35527 MIRLET7A1-201ENST00000362295 80 ntBASIC0.48□□□□□ -2.33
KRT9P35527 Y_RNA.68-201ENST00000362881 102 ntBASIC0.48□□□□□ -2.33
KRT9P35527 RNA5SP257-201ENST00000363023 116 ntBASIC0.48□□□□□ -2.33
KRT9P35527 RNA5SP457-201ENST00000363657 124 ntBASIC0.48□□□□□ -2.33
KRT9P35527 RNU6-681P-201ENST00000364012 104 ntBASIC0.48□□□□□ -2.33
KRT9P35527 AC097510.1-201ENST00000510945 133 ntBASIC0.48□□□□□ -2.33
KRT9P35527 MIR4514-201ENST00000581410 57 ntBASIC0.48□□□□□ -2.33
KRT9P35527 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
KRT9P35527 MIR6828-201ENST00000636181 60 ntBASIC0.48□□□□□ -2.33
KRT9P35527 Y_RNA.12-201ENST00000362393 112 ntBASIC0.47□□□□□ -2.33
KRT9P35527 Y_RNA.244-201ENST00000364484 109 ntBASIC0.47□□□□□ -2.33
KRT9P35527 RNA5SP517-201ENST00000364724 117 ntBASIC0.47□□□□□ -2.33
KRT9P35527 Y_RNA.371-201ENST00000365591 113 ntBASIC0.47□□□□□ -2.33
KRT9P35527 SNORA8.2-201ENST00000384372 139 ntBASIC0.47□□□□□ -2.33
KRT9P35527 RNU2-59P-201ENST00000410482 191 ntBASIC0.47□□□□□ -2.33
KRT9P35527 RNA5SP395-201ENST00000516567 118 ntBASIC0.47□□□□□ -2.33
KRT9P35527 RNU6-807P-201ENST00000516805 107 ntBASIC0.47□□□□□ -2.33
KRT9P35527 MIR4460-201ENST00000577862 86 ntBASIC0.47□□□□□ -2.33
KRT9P35527 MIRLET7D-201ENST00000362263 87 ntBASIC0.46□□□□□ -2.34
KRT9P35527 SNORA36.1-201ENST00000363424 132 ntBASIC0.46□□□□□ -2.34
KRT9P35527 RNU6-1177P-201ENST00000391058 104 ntBASIC0.46□□□□□ -2.34
KRT9P35527 RNU6-269P-201ENST00000391077 97 ntBASIC0.46□□□□□ -2.34
KRT9P35527 MIR1297-201ENST00000637311 77 ntBASIC0.46□□□□□ -2.34
KRT9P35527 MIR4662A-201ENST00000637499 67 ntBASIC0.46□□□□□ -2.34
KRT9P35527 SNORA24B-201ENST00000384176 131 ntBASIC0.45□□□□□ -2.34
KRT9P35527 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
KRT9P35527 RNU6-303P-201ENST00000517091 106 ntBASIC0.45□□□□□ -2.34
KRT9P35527 U7.4-201ENST00000614961 63 ntBASIC0.45□□□□□ -2.34
KRT9P35527 MIR548O2-201ENST00000616090 70 ntBASIC0.45□□□□□ -2.34
KRT9P35527 RNU6-340P-201ENST00000364005 107 ntBASIC0.44□□□□□ -2.34
KRT9P35527 RNU1-141P-201ENST00000364623 158 ntBASIC0.44□□□□□ -2.34
KRT9P35527 SNORA40.8-201ENST00000411034 126 ntBASIC0.44□□□□□ -2.34
KRT9P35527 MIR7107-201ENST00000611489 80 ntBASIC0.44□□□□□ -2.34
KRT9P35527 AL162376.1-201ENST00000624117 175 ntBASIC0.44□□□□□ -2.34
KRT9P35527 MIR4773-1-201ENST00000637203 78 ntBASIC0.44□□□□□ -2.34
KRT9P35527 MIR518A1-201ENST00000385068 85 ntBASIC0.43□□□□□ -2.34
KRT9P35527 MT-TY-201ENST00000387409 66 ntBASIC0.43□□□□□ -2.34
KRT9P35527 Y_RNA.606-201ENST00000410579 103 ntBASIC0.43□□□□□ -2.34
KRT9P35527 SNORD71-201ENST00000411292 86 ntBASIC0.43□□□□□ -2.34
KRT9P35527 AC093423.1-201ENST00000440817 142 ntBASIC0.43□□□□□ -2.34
KRT9P35527 NAMPTP3-201ENST00000569273 224 ntBASIC0.43□□□□□ -2.34
KRT9P35527 MIR4484-201ENST00000582855 83 ntBASIC0.43□□□□□ -2.34
KRT9P35527 AC073869.9-201ENST00000641610 120 ntBASIC0.43□□□□□ -2.34
KRT9P35527 RNU6-824P-201ENST00000363724 104 ntBASIC0.42□□□□□ -2.34
KRT9P35527 RNU6V-201ENST00000384105 107 ntBASIC0.42□□□□□ -2.34
KRT9P35527 RNA5SP484-201ENST00000458857 111 ntBASIC0.42□□□□□ -2.34
KRT9P35527 RNU6-274P-201ENST00000459566 107 ntBASIC0.42□□□□□ -2.34
KRT9P35527 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.42□□□□□ -2.34
KRT9P35527 Y_RNA.681-201ENST00000516445 113 ntBASIC0.42□□□□□ -2.34
KRT9P35527 AC145423.2-201ENST00000610631 239 ntBASIC0.42□□□□□ -2.34
KRT9P35527 U6.81-201ENST00000612550 106 ntBASIC0.42□□□□□ -2.34
KRT9P35527 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
KRT9P35527 MIR330-201ENST00000362196 94 ntBASIC0.41□□□□□ -2.34
KRT9P35527 RNU6-382P-201ENST00000365181 106 ntBASIC0.41□□□□□ -2.34
KRT9P35527 SNORA8.1-201ENST00000384250 140 ntBASIC0.41□□□□□ -2.34
KRT9P35527 SNORD110-201ENST00000408189 75 ntBASIC0.41□□□□□ -2.34
KRT9P35527 AC006210.1-201ENST00000424882 111 ntBASIC0.41□□□□□ -2.34
KRT9P35527 AC069503.3-201ENST00000618674 145 ntBASIC0.41□□□□□ -2.34
KRT9P35527 RNU6-495P-201ENST00000362995 107 ntBASIC0.4□□□□□ -2.35
KRT9P35527 SNORD118-201ENST00000363593 134 ntBASIC0.4□□□□□ -2.35
KRT9P35527 RNU6-776P-201ENST00000364403 104 ntBASIC0.4□□□□□ -2.35
KRT9P35527 RNU6-1022P-201ENST00000365049 104 ntBASIC0.4□□□□□ -2.35
KRT9P35527 RNU6-54P-201ENST00000365563 107 ntBASIC0.4□□□□□ -2.35
KRT9P35527 SNORD75.2-201ENST00000408784 58 ntBASIC0.4□□□□□ -2.35
KRT9P35527 AC074348.1-201ENST00000426503 132 ntBASIC0.4□□□□□ -2.35
KRT9P35527 AC069271.1-201ENST00000445577 156 ntBASIC0.4□□□□□ -2.35
KRT9P35527 AL691482.2-201ENST00000457453 84 ntBASIC0.4□□□□□ -2.35
KRT9P35527 RNU7-24P-201ENST00000458867 62 ntBASIC0.4□□□□□ -2.35
KRT9P35527 RNU5B-6P-201ENST00000516765 68 ntBASIC0.4□□□□□ -2.35
KRT9P35527 MIR4752-201ENST00000579672 72 ntBASIC0.4□□□□□ -2.35
KRT9P35527 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
KRT9P35527 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.4□□□□□ -2.35
KRT9P35527 SNORD114-4-201ENST00000363962 75 ntBASIC0.39□□□□□ -2.35
KRT9P35527 RNU6-154P-201ENST00000384306 106 ntBASIC0.39□□□□□ -2.35
KRT9P35527 SCARNA18B-201ENST00000458806 135 ntBASIC0.39□□□□□ -2.35
KRT9P35527 MIR3675-201ENST00000583661 73 ntBASIC0.39□□□□□ -2.35
KRT9P35527 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
KRT9P35527 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.39□□□□□ -2.35
KRT9P35527 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
KRT9P35527 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
KRT9P35527 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
KRT9P35527 Y_RNA.532-201ENST00000384590 113 ntBASIC0.38□□□□□ -2.35
KRT9P35527 MIR889-201ENST00000401280 79 ntBASIC0.38□□□□□ -2.35
KRT9P35527 RNU6-752P-201ENST00000516376 102 ntBASIC0.38□□□□□ -2.35
KRT9P35527 RNU6-70P-201ENST00000516438 60 ntBASIC0.38□□□□□ -2.35
KRT9P35527 RNA5SP476-201ENST00000516613 103 ntBASIC0.38□□□□□ -2.35
KRT9P35527 MIR5706-201ENST00000579841 80 ntBASIC0.38□□□□□ -2.35
KRT9P35527 U7.6-201ENST00000610841 64 ntBASIC0.38□□□□□ -2.35
KRT9P35527 RNU6-330P-201ENST00000363015 107 ntBASIC0.37□□□□□ -2.35
KRT9P35527 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
KRT9P35527 SNORA2A-201ENST00000383885 135 ntBASIC0.37□□□□□ -2.35
KRT9P35527 RNU6-1039P-201ENST00000383931 107 ntBASIC0.37□□□□□ -2.35
KRT9P35527 Y_RNA.423-201ENST00000384057 113 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 472.3 ms