Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 RNU6-811P-201ENST00000384069 107 ntBASIC0.17□□□□□ -2.38
PEPDP12955 RNU6-127P-201ENST00000390897 107 ntBASIC0.17□□□□□ -2.38
PEPDP12955 MIR876-201ENST00000401147 81 ntBASIC0.17□□□□□ -2.38
PEPDP12955 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.17□□□□□ -2.38
PEPDP12955 Y_RNA.81-201ENST00000362997 102 ntBASIC0.16□□□□□ -2.38
PEPDP12955 SNORD49B-201ENST00000365172 72 ntBASIC0.16□□□□□ -2.38
PEPDP12955 RNU6-132P-201ENST00000383863 107 ntBASIC0.16□□□□□ -2.38
PEPDP12955 RNU6V-201ENST00000384105 107 ntBASIC0.16□□□□□ -2.38
PEPDP12955 RNU6-1232P-201ENST00000516299 86 ntBASIC0.16□□□□□ -2.38
PEPDP12955 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.16□□□□□ -2.38
PEPDP12955 SNORA63.2-201ENST00000362603 126 ntBASIC0.15□□□□□ -2.39
PEPDP12955 RNU6-153P-201ENST00000364422 104 ntBASIC0.15□□□□□ -2.39
PEPDP12955 RNU6-640P-201ENST00000363693 105 ntBASIC0.14□□□□□ -2.39
PEPDP12955 Y_RNA.491-201ENST00000384417 107 ntBASIC0.14□□□□□ -2.39
PEPDP12955 RNU6-905P-201ENST00000384434 107 ntBASIC0.14□□□□□ -2.39
PEPDP12955 MIR451A-201ENST00000385059 72 ntBASIC0.14□□□□□ -2.39
PEPDP12955 MIR101-1-201ENST00000362265 75 ntBASIC0.13□□□□□ -2.39
PEPDP12955 MIR224-201ENST00000384889 81 ntBASIC0.13□□□□□ -2.39
PEPDP12955 SNORA75.1-201ENST00000391130 148 ntBASIC0.13□□□□□ -2.39
PEPDP12955 MALAT1.1-201ENST00000618249 95 ntBASIC0.13□□□□□ -2.39
PEPDP12955 MIRLET7F1-201ENST00000362202 87 ntBASIC0.12□□□□□ -2.39
PEPDP12955 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
PEPDP12955 MIR610-201ENST00000385139 96 ntBASIC0.12□□□□□ -2.39
PEPDP12955 MIR1236-201ENST00000408340 102 ntBASIC0.12□□□□□ -2.39
PEPDP12955 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
PEPDP12955 MIR548H2-201ENST00000408874 88 ntBASIC0.12□□□□□ -2.39
PEPDP12955 RNU7-129P-201ENST00000516128 62 ntBASIC0.12□□□□□ -2.39
PEPDP12955 AC026421.1-201ENST00000519101 163 ntBASIC0.12□□□□□ -2.39
PEPDP12955 YWHAEP2-201ENST00000580066 112 ntBASIC0.12□□□□□ -2.39
PEPDP12955 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.12□□□□□ -2.39
PEPDP12955 Y_RNA.190-201ENST00000363964 101 ntBASIC0.11□□□□□ -2.39
PEPDP12955 Y_RNA.407-201ENST00000383986 113 ntBASIC0.11□□□□□ -2.39
PEPDP12955 Y_RNA.468-201ENST00000384298 102 ntBASIC0.11□□□□□ -2.39
PEPDP12955 Y_RNA.514-201ENST00000384528 112 ntBASIC0.11□□□□□ -2.39
PEPDP12955 Y_RNA.609-201ENST00000410669 89 ntBASIC0.11□□□□□ -2.39
PEPDP12955 Y_RNA.660-201ENST00000516002 120 ntBASIC0.11□□□□□ -2.39
PEPDP12955 uc_338.10-201ENST00000621872 182 ntBASIC0.11□□□□□ -2.39
PEPDP12955 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
PEPDP12955 SNORA24B-201ENST00000384176 131 ntBASIC0.1□□□□□ -2.39
PEPDP12955 MIR601-201ENST00000385256 79 ntBASIC0.1□□□□□ -2.39
PEPDP12955 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
PEPDP12955 MIR1207-201ENST00000408249 87 ntBASIC0.1□□□□□ -2.39
PEPDP12955 RNU6-168P-201ENST00000516189 101 ntBASIC0.1□□□□□ -2.39
PEPDP12955 MIR3925-201ENST00000584674 77 ntBASIC0.1□□□□□ -2.39
PEPDP12955 MIR499B-201ENST00000636498 73 ntBASIC0.1□□□□□ -2.39
PEPDP12955 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.1□□□□□ -2.39
PEPDP12955 SNORD114-16-201ENST00000363044 70 ntBASIC0.09□□□□□ -2.4
PEPDP12955 RNU7-24P-201ENST00000458867 62 ntBASIC0.09□□□□□ -2.4
PEPDP12955 SNORA18.5-201ENST00000516616 101 ntBASIC0.09□□□□□ -2.4
PEPDP12955 MIR4645-201ENST00000583158 77 ntBASIC0.09□□□□□ -2.4
PEPDP12955 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.4
PEPDP12955 RNU6-633P-201ENST00000362612 103 ntBASIC0.08□□□□□ -2.4
PEPDP12955 RNU4-32P-201ENST00000363404 141 ntBASIC0.08□□□□□ -2.4
PEPDP12955 RNU6-497P-201ENST00000365316 104 ntBASIC0.08□□□□□ -2.4
PEPDP12955 RNU6-1051P-201ENST00000365471 102 ntBASIC0.08□□□□□ -2.4
PEPDP12955 MTATP6P29-201ENST00000415057 132 ntBASIC0.08□□□□□ -2.4
PEPDP12955 RNU6-180P-201ENST00000516697 61 ntBASIC0.08□□□□□ -2.4
PEPDP12955 SNORD114-4-201ENST00000363962 75 ntBASIC0.07□□□□□ -2.4
PEPDP12955 Y_RNA.437-201ENST00000384113 113 ntBASIC0.07□□□□□ -2.4
PEPDP12955 MIR106A-201ENST00000384870 81 ntBASIC0.07□□□□□ -2.4
PEPDP12955 RNA5SP292-201ENST00000390974 118 ntBASIC0.07□□□□□ -2.4
PEPDP12955 RNU6-162P-201ENST00000516228 103 ntBASIC0.07□□□□□ -2.4
PEPDP12955 Y_RNA.694-201ENST00000516677 117 ntBASIC0.07□□□□□ -2.4
PEPDP12955 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
PEPDP12955 Y_RNA.220-201ENST00000364244 109 ntBASIC0.06□□□□□ -2.4
PEPDP12955 SNORD116-22-201ENST00000384430 92 ntBASIC0.06□□□□□ -2.4
PEPDP12955 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
PEPDP12955 RNA5SP451-201ENST00000410588 110 ntBASIC0.06□□□□□ -2.4
PEPDP12955 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.06□□□□□ -2.4
PEPDP12955 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
PEPDP12955 MIR148A-201ENST00000362215 68 ntBASIC0.05□□□□□ -2.4
PEPDP12955 SNORD114-29-201ENST00000364819 70 ntBASIC0.05□□□□□ -2.4
PEPDP12955 MIR214-201ENST00000385214 110 ntBASIC0.05□□□□□ -2.4
PEPDP12955 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
PEPDP12955 RNA5SP89-201ENST00000410300 108 ntBASIC0.05□□□□□ -2.4
PEPDP12955 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
PEPDP12955 MIR8064-201ENST00000612863 90 ntBASIC0.05□□□□□ -2.4
PEPDP12955 AC084368.1-201ENST00000620935 65 ntBASIC0.05□□□□□ -2.4
PEPDP12955 MIR1295B-201ENST00000636144 60 ntBASIC0.05□□□□□ -2.4
PEPDP12955 SNORD114-28-201ENST00000363610 72 ntBASIC0.04□□□□□ -2.4
PEPDP12955 MIR516B1-201ENST00000385211 90 ntBASIC0.04□□□□□ -2.4
PEPDP12955 Y_RNA.620-201ENST00000411009 88 ntBASIC0.04□□□□□ -2.4
PEPDP12955 RNU4-63P-201ENST00000411313 118 ntBASIC0.04□□□□□ -2.4
PEPDP12955 AC244090.1-201ENST00000441884 93 ntBASIC0.04□□□□□ -2.4
PEPDP12955 CR383656.4-201ENST00000546909 122 ntBASIC0.04□□□□□ -2.4
PEPDP12955 MIR548AX-201ENST00000580117 73 ntBASIC0.04□□□□□ -2.4
PEPDP12955 MIR4668-201ENST00000582284 70 ntBASIC0.04□□□□□ -2.4
PEPDP12955 RNU6-495P-201ENST00000362995 107 ntBASIC0.03□□□□□ -2.4
PEPDP12955 MIR488-201ENST00000365739 83 ntBASIC0.03□□□□□ -2.4
PEPDP12955 MIR519C-201ENST00000385053 87 ntBASIC0.03□□□□□ -2.4
PEPDP12955 RNU5B-6P-201ENST00000516765 68 ntBASIC0.03□□□□□ -2.4
PEPDP12955 SCARNA11.2-201ENST00000517183 154 ntBASIC0.03□□□□□ -2.4
PEPDP12955 MIR4796-201ENST00000580742 81 ntBASIC0.03□□□□□ -2.4
PEPDP12955 MIR20A-201ENST00000362279 71 ntBASIC0.02□□□□□ -2.41
PEPDP12955 Y_RNA.413-201ENST00000384007 102 ntBASIC0.02□□□□□ -2.41
PEPDP12955 RNU6-675P-201ENST00000384236 104 ntBASIC0.02□□□□□ -2.41
PEPDP12955 Y_RNA.558-201ENST00000384685 113 ntBASIC0.02□□□□□ -2.41
PEPDP12955 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
PEPDP12955 SNORD2-201ENST00000459163 69 ntBASIC0.02□□□□□ -2.41
PEPDP12955 Y_RNA.754-201ENST00000476024 102 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms