Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU7-24P-201ENST00000458867 62 ntBASIC-1.19□□□□□ -2.6
MBD3O95983 FGF7P7-201ENST00000514120 227 ntBASIC-1.19□□□□□ -2.6
MBD3O95983 RNA5SP461-201ENST00000516451 104 ntBASIC-1.19□□□□□ -2.6
MBD3O95983 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.19□□□□□ -2.6
MBD3O95983 AC068339.1-201ENST00000526965 141 ntBASIC-1.19□□□□□ -2.6
MBD3O95983 MIR378F-201ENST00000578143 78 ntBASIC-1.19□□□□□ -2.6
MBD3O95983 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.2□□□□□ -2.6
MBD3O95983 SNORA63.6-201ENST00000364921 119 ntBASIC-1.2□□□□□ -2.6
MBD3O95983 RNU6-721P-201ENST00000410155 105 ntBASIC-1.2□□□□□ -2.6
MBD3O95983 RNU6-274P-201ENST00000459566 107 ntBASIC-1.2□□□□□ -2.6
MBD3O95983 MIR3115-201ENST00000577915 68 ntBASIC-1.2□□□□□ -2.6
MBD3O95983 MIR6773-201ENST00000612812 74 ntBASIC-1.2□□□□□ -2.6
MBD3O95983 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.21□□□□□ -2.6
MBD3O95983 RNA5SP192-201ENST00000364404 120 ntBASIC-1.21□□□□□ -2.6
MBD3O95983 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
MBD3O95983 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.21□□□□□ -2.6
MBD3O95983 MTND4LP9-201ENST00000427694 174 ntBASIC-1.21□□□□□ -2.6
MBD3O95983 AC097510.1-201ENST00000510945 133 ntBASIC-1.21□□□□□ -2.6
MBD3O95983 RNU6-719P-201ENST00000516671 104 ntBASIC-1.21□□□□□ -2.6
MBD3O95983 MIR4499-201ENST00000584834 69 ntBASIC-1.21□□□□□ -2.6
MBD3O95983 uc_338.19-201ENST00000616808 99 ntBASIC-1.21□□□□□ -2.6
MBD3O95983 AL157777.2-201ENST00000258070 137 ntBASIC-1.22□□□□□ -2.6
MBD3O95983 RNU6-813P-201ENST00000384691 107 ntBASIC-1.22□□□□□ -2.6
MBD3O95983 RNU6-772P-201ENST00000516042 105 ntBASIC-1.22□□□□□ -2.6
MBD3O95983 snoR1.1-201ENST00000628177 80 ntBASIC-1.22□□□□□ -2.6
MBD3O95983 SNORD114-25-201ENST00000363742 72 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 SNORD115-23-201ENST00000364461 82 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 RNU6-132P-201ENST00000383863 107 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 RNU6-886P-201ENST00000384319 105 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 RNU6-592P-201ENST00000411333 103 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 SNORD22.1-201ENST00000516331 125 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 RNU6-426P-201ENST00000516464 97 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 MIR3064-201ENST00000581130 66 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 AL035470.1-201ENST00000622571 220 ntBASIC-1.23□□□□□ -2.61
MBD3O95983 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.24□□□□□ -2.61
MBD3O95983 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.24□□□□□ -2.61
MBD3O95983 SNORA24B-201ENST00000384176 131 ntBASIC-1.24□□□□□ -2.61
MBD3O95983 MIRLET7B-201ENST00000385140 83 ntBASIC-1.24□□□□□ -2.61
MBD3O95983 SNORA40-201ENST00000388090 126 ntBASIC-1.24□□□□□ -2.61
MBD3O95983 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
MBD3O95983 RNU6-62P-201ENST00000516526 102 ntBASIC-1.24□□□□□ -2.61
MBD3O95983 SNORD4B-201ENST00000459083 72 ntBASIC-1.25□□□□□ -2.61
MBD3O95983 MIR5009-201ENST00000578736 100 ntBASIC-1.25□□□□□ -2.61
MBD3O95983 MIR3613-201ENST00000579844 87 ntBASIC-1.25□□□□□ -2.61
MBD3O95983 MIR5704-201ENST00000584029 77 ntBASIC-1.25□□□□□ -2.61
MBD3O95983 AC104996.3-201ENST00000590718 94 ntBASIC-1.25□□□□□ -2.61
MBD3O95983 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.26□□□□□ -2.61
MBD3O95983 RNU6-337P-201ENST00000391243 106 ntBASIC-1.26□□□□□ -2.61
MBD3O95983 SNORD75.2-201ENST00000408784 58 ntBASIC-1.26□□□□□ -2.61
MBD3O95983 MTND5P41-201ENST00000517498 206 ntBASIC-1.26□□□□□ -2.61
MBD3O95983 MIR3165-201ENST00000579874 75 ntBASIC-1.27□□□□□ -2.61
MBD3O95983 MIR198-201ENST00000637333 62 ntBASIC-1.27□□□□□ -2.61
MBD3O95983 SNORA62.4-201ENST00000365504 151 ntBASIC-1.28□□□□□ -2.61
MBD3O95983 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.28□□□□□ -2.61
MBD3O95983 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.28□□□□□ -2.61
MBD3O95983 AC022137.1-201ENST00000483735 151 ntBASIC-1.28□□□□□ -2.61
MBD3O95983 RNA5SP272-201ENST00000516095 111 ntBASIC-1.28□□□□□ -2.61
MBD3O95983 YWHAEP3-201ENST00000582767 121 ntBASIC-1.28□□□□□ -2.61
MBD3O95983 AC103810.7-201ENST00000607821 91 ntBASIC-1.28□□□□□ -2.61
MBD3O95983 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.29□□□□□ -2.62
MBD3O95983 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.29□□□□□ -2.62
MBD3O95983 MIR3140-201ENST00000583685 90 ntBASIC-1.29□□□□□ -2.62
MBD3O95983 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.3□□□□□ -2.62
MBD3O95983 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.3□□□□□ -2.62
MBD3O95983 MIR548Z-201ENST00000584743 97 ntBASIC-1.3□□□□□ -2.62
MBD3O95983 MIR4723-201ENST00000585070 81 ntBASIC-1.3□□□□□ -2.62
MBD3O95983 MIR8068-201ENST00000618032 68 ntBASIC-1.3□□□□□ -2.62
MBD3O95983 MIR517B-201ENST00000385102 67 ntBASIC-1.31□□□□□ -2.62
MBD3O95983 AP000533.3-201ENST00000447704 118 ntBASIC-1.31□□□□□ -2.62
MBD3O95983 RNU7-200P-201ENST00000516105 62 ntBASIC-1.31□□□□□ -2.62
MBD3O95983 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.31□□□□□ -2.62
MBD3O95983 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.32□□□□□ -2.62
MBD3O95983 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.32□□□□□ -2.62
MBD3O95983 MIR548A1-201ENST00000385041 97 ntBASIC-1.32□□□□□ -2.62
MBD3O95983 RNU6-519P-201ENST00000410590 108 ntBASIC-1.32□□□□□ -2.62
MBD3O95983 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.32□□□□□ -2.62
MBD3O95983 U4.2-201ENST00000618561 85 ntBASIC-1.32□□□□□ -2.62
MBD3O95983 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.32□□□□□ -2.62
MBD3O95983 MIR3914-2-201ENST00000637339 95 ntBASIC-1.32□□□□□ -2.62
MBD3O95983 RNU6-257P-201ENST00000410238 98 ntBASIC-1.33□□□□□ -2.62
MBD3O95983 MTATP6P29-201ENST00000415057 132 ntBASIC-1.33□□□□□ -2.62
MBD3O95983 MIR4306-201ENST00000583390 91 ntBASIC-1.33□□□□□ -2.62
MBD3O95983 AC006254.2-201ENST00000603259 279 ntBASIC-1.33□□□□□ -2.62
MBD3O95983 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.34□□□□□ -2.62
MBD3O95983 U6.95-201ENST00000636931 70 ntBASIC-1.34□□□□□ -2.62
MBD3O95983 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.35□□□□□ -2.63
MBD3O95983 AC021146.9-201ENST00000512503 156 ntBASIC-1.35□□□□□ -2.63
MBD3O95983 AC140658.3-201ENST00000567603 271 ntBASIC-1.35□□□□□ -2.63
MBD3O95983 MIR4777-201ENST00000583710 86 ntBASIC-1.35□□□□□ -2.63
MBD3O95983 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.36□□□□□ -2.63
MBD3O95983 RNY1P5-201ENST00000383890 115 ntBASIC-1.36□□□□□ -2.63
MBD3O95983 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.36□□□□□ -2.63
MBD3O95983 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.36□□□□□ -2.63
MBD3O95983 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.36□□□□□ -2.63
MBD3O95983 SCARNA18B-201ENST00000458806 135 ntBASIC-1.36□□□□□ -2.63
MBD3O95983 U6.96-201ENST00000636425 70 ntBASIC-1.36□□□□□ -2.63
MBD3O95983 AC099654.10-201ENST00000640395 161 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms