Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 SNORD116-15-201ENST00000384445 92 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 RNU6-880P-201ENST00000384526 107 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 SNORD116-19-201ENST00000384729 92 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
HCN1O60741 MIR548E-201ENST00000408287 88 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 MIR548I1-201ENST00000408810 149 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 SNORD42B-201ENST00000458893 67 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 SNORD4B-201ENST00000459083 72 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 MIR4777-201ENST00000583710 86 ntBASIC-0.57□□□□□ -2.5
HCN1O60741 RNU6-901P-201ENST00000384593 106 ntBASIC-0.58□□□□□ -2.5
HCN1O60741 MIR196A1-201ENST00000388006 70 ntBASIC-0.58□□□□□ -2.5
HCN1O60741 RNU7-55P-201ENST00000459426 62 ntBASIC-0.58□□□□□ -2.5
HCN1O60741 RNU6-412P-201ENST00000516434 106 ntBASIC-0.58□□□□□ -2.5
HCN1O60741 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.58□□□□□ -2.5
HCN1O60741 SNORA40.17-201ENST00000517256 115 ntBASIC-0.58□□□□□ -2.5
HCN1O60741 MIR3671-201ENST00000580455 88 ntBASIC-0.58□□□□□ -2.5
HCN1O60741 AC104996.3-201ENST00000590718 94 ntBASIC-0.58□□□□□ -2.5
HCN1O60741 MIR409-201ENST00000362237 79 ntBASIC-0.59□□□□□ -2.5
HCN1O60741 SNORD56B-201ENST00000384713 71 ntBASIC-0.59□□□□□ -2.5
HCN1O60741 RNU6-519P-201ENST00000410590 108 ntBASIC-0.59□□□□□ -2.5
HCN1O60741 RNU6-795P-201ENST00000516323 103 ntBASIC-0.59□□□□□ -2.5
HCN1O60741 MIR548AX-201ENST00000580117 73 ntBASIC-0.59□□□□□ -2.5
HCN1O60741 MIR548Z-201ENST00000584743 97 ntBASIC-0.59□□□□□ -2.5
HCN1O60741 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.6□□□□□ -2.51
HCN1O60741 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.6□□□□□ -2.51
HCN1O60741 SNORD116-21-201ENST00000384507 92 ntBASIC-0.6□□□□□ -2.51
HCN1O60741 MT-TQ-201ENST00000387372 72 ntBASIC-0.6□□□□□ -2.51
HCN1O60741 AL445193.1-201ENST00000441183 141 ntBASIC-0.6□□□□□ -2.51
HCN1O60741 MIR3133-201ENST00000583157 78 ntBASIC-0.6□□□□□ -2.51
HCN1O60741 AC012531.4-201ENST00000616509 177 ntBASIC-0.6□□□□□ -2.51
HCN1O60741 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
HCN1O60741 RNU4-63P-201ENST00000411313 118 ntBASIC-0.61□□□□□ -2.51
HCN1O60741 AL500527.2-201ENST00000454105 95 ntBASIC-0.61□□□□□ -2.51
HCN1O60741 snoU13.13-201ENST00000458842 104 ntBASIC-0.61□□□□□ -2.51
HCN1O60741 MIR3668-201ENST00000582138 75 ntBASIC-0.61□□□□□ -2.51
HCN1O60741 MIR3140-201ENST00000583685 90 ntBASIC-0.61□□□□□ -2.51
HCN1O60741 RNU6-495P-201ENST00000362995 107 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 SNORD114-25-201ENST00000363742 72 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 RNU6-704P-201ENST00000364162 103 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 AC097510.1-201ENST00000510945 133 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 SCARNA23-201ENST00000516060 130 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 RNU6-904P-201ENST00000516206 101 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 MIR4280-201ENST00000582178 76 ntBASIC-0.62□□□□□ -2.51
HCN1O60741 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.63□□□□□ -2.51
HCN1O60741 SNORA24B-201ENST00000384176 131 ntBASIC-0.63□□□□□ -2.51
HCN1O60741 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.63□□□□□ -2.51
HCN1O60741 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.63□□□□□ -2.51
HCN1O60741 RNU6-62P-201ENST00000516526 102 ntBASIC-0.63□□□□□ -2.51
HCN1O60741 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.63□□□□□ -2.51
HCN1O60741 RNU6-502P-201ENST00000362419 108 ntBASIC-0.64□□□□□ -2.51
HCN1O60741 RNA5SP331-201ENST00000364986 107 ntBASIC-0.64□□□□□ -2.51
HCN1O60741 RNU6-972P-201ENST00000391208 107 ntBASIC-0.64□□□□□ -2.51
HCN1O60741 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.64□□□□□ -2.51
HCN1O60741 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 RNU6-973P-201ENST00000364690 107 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 RNU6-746P-201ENST00000384112 109 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 MIR204-201ENST00000385200 110 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 RNA5SP292-201ENST00000390974 118 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 SNORA19.1-201ENST00000410656 129 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 MIR6851-201ENST00000617060 67 ntBASIC-0.65□□□□□ -2.51
HCN1O60741 RNU6-774P-201ENST00000363238 107 ntBASIC-0.66□□□□□ -2.52
HCN1O60741 SNORA63.6-201ENST00000364921 119 ntBASIC-0.66□□□□□ -2.52
HCN1O60741 SNORD58A-201ENST00000383875 65 ntBASIC-0.66□□□□□ -2.52
HCN1O60741 RNU6-476P-201ENST00000384726 107 ntBASIC-0.66□□□□□ -2.52
HCN1O60741 RNU6-721P-201ENST00000410155 105 ntBASIC-0.66□□□□□ -2.52
HCN1O60741 RNU6-887P-201ENST00000410660 100 ntBASIC-0.66□□□□□ -2.52
HCN1O60741 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.66□□□□□ -2.52
HCN1O60741 RNU7-24P-201ENST00000458867 62 ntBASIC-0.66□□□□□ -2.52
HCN1O60741 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.66□□□□□ -2.52
HCN1O60741 SNORD38.3-201ENST00000516599 73 ntBASIC-0.66□□□□□ -2.52
HCN1O60741 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.66□□□□□ -2.52
HCN1O60741 SNORD75.2-201ENST00000408784 58 ntBASIC-0.67□□□□□ -2.52
HCN1O60741 MTATP6P29-201ENST00000415057 132 ntBASIC-0.67□□□□□ -2.52
HCN1O60741 SNORA18.5-201ENST00000516616 101 ntBASIC-0.67□□□□□ -2.52
HCN1O60741 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.67□□□□□ -2.52
HCN1O60741 RNU6-959P-201ENST00000384671 107 ntBASIC-0.68□□□□□ -2.52
HCN1O60741 RNY1P7-201ENST00000384743 110 ntBASIC-0.68□□□□□ -2.52
HCN1O60741 SNORD83B-201ENST00000386745 93 ntBASIC-0.68□□□□□ -2.52
HCN1O60741 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.68□□□□□ -2.52
HCN1O60741 MIR1302-5-201ENST00000408164 150 ntBASIC-0.69□□□□□ -2.52
HCN1O60741 RNA5SP266-201ENST00000410273 108 ntBASIC-0.69□□□□□ -2.52
HCN1O60741 AC008267.6-201ENST00000441664 139 ntBASIC-0.69□□□□□ -2.52
HCN1O60741 SNORA13-201ENST00000458790 133 ntBASIC-0.69□□□□□ -2.52
HCN1O60741 AC021146.6-201ENST00000514659 117 ntBASIC-0.69□□□□□ -2.52
HCN1O60741 MIR6773-201ENST00000612812 74 ntBASIC-0.69□□□□□ -2.52
HCN1O60741 SNORD116-10-201ENST00000363791 102 ntBASIC-0.7□□□□□ -2.52
HCN1O60741 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.7□□□□□ -2.52
HCN1O60741 SNORD90-201ENST00000391145 111 ntBASIC-0.7□□□□□ -2.52
HCN1O60741 RNU6-881P-201ENST00000516813 102 ntBASIC-0.7□□□□□ -2.52
HCN1O60741 RNU4-32P-201ENST00000363404 141 ntBASIC-0.71□□□□□ -2.52
HCN1O60741 RNU6-990P-201ENST00000364385 104 ntBASIC-0.71□□□□□ -2.52
HCN1O60741 MIR4499-201ENST00000584834 69 ntBASIC-0.71□□□□□ -2.52
HCN1O60741 AC006254.2-201ENST00000603259 279 ntBASIC-0.71□□□□□ -2.52
HCN1O60741 RNU5F-1-201ENST00000362507 117 ntBASIC-0.72□□□□□ -2.52
HCN1O60741 MIR590-201ENST00000385008 97 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms