Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.33□□□□□ -2.46
SSX4O60224 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.33□□□□□ -2.46
SSX4O60224 RNU2-51P-201ENST00000410708 197 ntBASIC-0.33□□□□□ -2.46
SSX4O60224 AC244250.2-201ENST00000418731 148 ntBASIC-0.33□□□□□ -2.46
SSX4O60224 RNU7-61P-201ENST00000515897 61 ntBASIC-0.33□□□□□ -2.46
SSX4O60224 RNU6-109P-201ENST00000516364 107 ntBASIC-0.33□□□□□ -2.46
SSX4O60224 RNU6-184P-201ENST00000516514 107 ntBASIC-0.33□□□□□ -2.46
SSX4O60224 SNORA63.2-201ENST00000362603 126 ntBASIC-0.34□□□□□ -2.46
SSX4O60224 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.34□□□□□ -2.46
SSX4O60224 SNORD114-28-201ENST00000363610 72 ntBASIC-0.34□□□□□ -2.46
SSX4O60224 SNORD113-1-201ENST00000365321 69 ntBASIC-0.34□□□□□ -2.46
SSX4O60224 RNU6-758P-201ENST00000516292 89 ntBASIC-0.34□□□□□ -2.46
SSX4O60224 MIR3140-201ENST00000583685 90 ntBASIC-0.34□□□□□ -2.46
SSX4O60224 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.34□□□□□ -2.46
SSX4O60224 SNORD116-10-201ENST00000363791 102 ntBASIC-0.35□□□□□ -2.47
SSX4O60224 RNA5SP292-201ENST00000390974 118 ntBASIC-0.35□□□□□ -2.47
SSX4O60224 Z95118.1-201ENST00000421372 247 ntBASIC-0.35□□□□□ -2.47
SSX4O60224 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.35□□□□□ -2.47
SSX4O60224 MIR101-1-201ENST00000362265 75 ntBASIC-0.36□□□□□ -2.47
SSX4O60224 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.36□□□□□ -2.47
SSX4O60224 SNORD114-4-201ENST00000363962 75 ntBASIC-0.36□□□□□ -2.47
SSX4O60224 MIR604-201ENST00000384880 94 ntBASIC-0.36□□□□□ -2.47
SSX4O60224 SNORD42B-201ENST00000458893 67 ntBASIC-0.36□□□□□ -2.47
SSX4O60224 RNA5SP368-201ENST00000364298 116 ntBASIC-0.37□□□□□ -2.47
SSX4O60224 AC026421.1-201ENST00000519101 163 ntBASIC-0.37□□□□□ -2.47
SSX4O60224 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
SSX4O60224 MIR655-201ENST00000362159 97 ntBASIC-0.38□□□□□ -2.47
SSX4O60224 RNU6-766P-201ENST00000362478 107 ntBASIC-0.38□□□□□ -2.47
SSX4O60224 RNU4-32P-201ENST00000363404 141 ntBASIC-0.38□□□□□ -2.47
SSX4O60224 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.38□□□□□ -2.47
SSX4O60224 RNY4P3-201ENST00000365254 95 ntBASIC-0.38□□□□□ -2.47
SSX4O60224 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.38□□□□□ -2.47
SSX4O60224 AL606753.1-201ENST00000427435 87 ntBASIC-0.38□□□□□ -2.47
SSX4O60224 SNORA18.5-201ENST00000516616 101 ntBASIC-0.38□□□□□ -2.47
SSX4O60224 RNA5SP25-201ENST00000410815 110 ntBASIC-0.39□□□□□ -2.47
SSX4O60224 SNORA24B-201ENST00000384176 131 ntBASIC-0.4□□□□□ -2.47
SSX4O60224 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.4□□□□□ -2.47
SSX4O60224 RNU6-162P-201ENST00000516228 103 ntBASIC-0.4□□□□□ -2.47
SSX4O60224 MIR582-201ENST00000365731 98 ntBASIC-0.41□□□□□ -2.48
SSX4O60224 MTATP6P29-201ENST00000415057 132 ntBASIC-0.41□□□□□ -2.48
SSX4O60224 AP000676.1-201ENST00000533307 52 ntBASIC-0.41□□□□□ -2.48
SSX4O60224 MIR4263-201ENST00000584745 83 ntBASIC-0.41□□□□□ -2.48
SSX4O60224 AC108676.2-201ENST00000605225 163 ntBASIC-0.41□□□□□ -2.48
SSX4O60224 U7.3-201ENST00000616123 62 ntBASIC-0.41□□□□□ -2.48
SSX4O60224 RNU6-495P-201ENST00000362995 107 ntBASIC-0.42□□□□□ -2.48
SSX4O60224 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.42□□□□□ -2.48
SSX4O60224 RNU6-455P-201ENST00000384681 107 ntBASIC-0.42□□□□□ -2.48
SSX4O60224 SNORA49-201ENST00000386157 136 ntBASIC-0.42□□□□□ -2.48
SSX4O60224 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.42□□□□□ -2.48
SSX4O60224 SNORD90-201ENST00000391145 111 ntBASIC-0.42□□□□□ -2.48
SSX4O60224 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
SSX4O60224 MIR548E-201ENST00000408287 88 ntBASIC-0.42□□□□□ -2.48
SSX4O60224 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.43□□□□□ -2.48
SSX4O60224 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.43□□□□□ -2.48
SSX4O60224 RNY4P18-201ENST00000391107 89 ntBASIC-0.43□□□□□ -2.48
SSX4O60224 AL031737.1-201ENST00000450125 223 ntBASIC-0.43□□□□□ -2.48
SSX4O60224 MIR8064-201ENST00000612863 90 ntBASIC-0.43□□□□□ -2.48
SSX4O60224 snoU13.19-201ENST00000459148 104 ntBASIC-0.44□□□□□ -2.48
SSX4O60224 SNORD2-201ENST00000459163 69 ntBASIC-0.44□□□□□ -2.48
SSX4O60224 RNU6-789P-201ENST00000517105 102 ntBASIC-0.44□□□□□ -2.48
SSX4O60224 MIR450A1-201ENST00000362262 91 ntBASIC-0.45□□□□□ -2.48
SSX4O60224 RNA5SP451-201ENST00000410588 110 ntBASIC-0.45□□□□□ -2.48
SSX4O60224 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.45□□□□□ -2.48
SSX4O60224 MTATP8P2-201ENST00000435212 202 ntBASIC-0.45□□□□□ -2.48
SSX4O60224 MIR4788-201ENST00000639104 80 ntBASIC-0.45□□□□□ -2.48
SSX4O60224 SNORD115-25-201ENST00000362619 82 ntBASIC-0.46□□□□□ -2.48
SSX4O60224 SNORD95.1-201ENST00000364099 68 ntBASIC-0.46□□□□□ -2.48
SSX4O60224 RNU6-30P-201ENST00000384561 107 ntBASIC-0.46□□□□□ -2.48
SSX4O60224 MIR9-2-201ENST00000384838 87 ntBASIC-0.46□□□□□ -2.48
SSX4O60224 RNU6-158P-201ENST00000517104 100 ntBASIC-0.46□□□□□ -2.48
SSX4O60224 AC097510.1-201ENST00000510945 133 ntBASIC-0.47□□□□□ -2.48
SSX4O60224 RNU6-320P-201ENST00000516511 106 ntBASIC-0.47□□□□□ -2.48
SSX4O60224 AC145423.2-201ENST00000610631 239 ntBASIC-0.47□□□□□ -2.48
SSX4O60224 AL590491.3-201ENST00000610731 82 ntBASIC-0.47□□□□□ -2.48
SSX4O60224 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.48□□□□□ -2.49
SSX4O60224 SNORD75.2-201ENST00000408784 58 ntBASIC-0.48□□□□□ -2.49
SSX4O60224 RNU7-24P-201ENST00000458867 62 ntBASIC-0.48□□□□□ -2.49
SSX4O60224 RNU5F-1-201ENST00000362507 117 ntBASIC-0.49□□□□□ -2.49
SSX4O60224 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.49□□□□□ -2.49
SSX4O60224 RNU6-900P-201ENST00000384498 102 ntBASIC-0.49□□□□□ -2.49
SSX4O60224 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.49□□□□□ -2.49
SSX4O60224 MIR1236-201ENST00000408340 102 ntBASIC-0.49□□□□□ -2.49
SSX4O60224 RNU4-61P-201ENST00000411243 107 ntBASIC-0.49□□□□□ -2.49
SSX4O60224 MIR4796-201ENST00000580742 81 ntBASIC-0.49□□□□□ -2.49
SSX4O60224 MIR2052-201ENST00000636055 55 ntBASIC-0.49□□□□□ -2.49
SSX4O60224 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.5□□□□□ -2.49
SSX4O60224 SNORD114-15-201ENST00000364687 72 ntBASIC-0.5□□□□□ -2.49
SSX4O60224 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.5□□□□□ -2.49
SSX4O60224 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
SSX4O60224 RNU6-406P-201ENST00000516470 107 ntBASIC-0.5□□□□□ -2.49
SSX4O60224 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.5□□□□□ -2.49
SSX4O60224 RNA5SP275-201ENST00000363936 118 ntBASIC-0.51□□□□□ -2.49
SSX4O60224 snoU13.17-201ENST00000458802 104 ntBASIC-0.51□□□□□ -2.49
SSX4O60224 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
SSX4O60224 RPS29P8-201ENST00000445109 171 ntBASIC-0.52□□□□□ -2.49
SSX4O60224 AC006254.2-201ENST00000603259 279 ntBASIC-0.52□□□□□ -2.49
SSX4O60224 RNU6-990P-201ENST00000364385 104 ntBASIC-0.53□□□□□ -2.49
SSX4O60224 RNU6-755P-201ENST00000364400 103 ntBASIC-0.53□□□□□ -2.49
SSX4O60224 SNORA63.6-201ENST00000364921 119 ntBASIC-0.53□□□□□ -2.49
SSX4O60224 RNU6-382P-201ENST00000365181 106 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 230.2 ms