Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR652-201ENST00000385278 98 ntBASIC1.69□□□□□ -2.14
ACTN4O43707 RNA5SP227-201ENST00000516184 113 ntBASIC1.69□□□□□ -2.14
ACTN4O43707 MIR4285-201ENST00000581001 85 ntBASIC1.69□□□□□ -2.14
ACTN4O43707 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.69□□□□□ -2.14
ACTN4O43707 SNORD13-201ENST00000459299 104 ntBASIC1.68□□□□□ -2.14
ACTN4O43707 RNA5SP190-201ENST00000365222 118 ntBASIC1.67□□□□□ -2.14
ACTN4O43707 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
ACTN4O43707 RNA5SP99-201ENST00000364020 114 ntBASIC1.66□□□□□ -2.14
ACTN4O43707 AC006210.1-201ENST00000424882 111 ntBASIC1.66□□□□□ -2.14
ACTN4O43707 MIR4473-201ENST00000583731 91 ntBASIC1.66□□□□□ -2.14
ACTN4O43707 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.66□□□□□ -2.14
ACTN4O43707 MIR6828-201ENST00000636181 60 ntBASIC1.66□□□□□ -2.14
ACTN4O43707 MIR517C-201ENST00000385103 95 ntBASIC1.65□□□□□ -2.15
ACTN4O43707 RNA5SP61-201ENST00000516453 100 ntBASIC1.65□□□□□ -2.15
ACTN4O43707 Y_RNA.246-201ENST00000364495 108 ntBASIC1.64□□□□□ -2.15
ACTN4O43707 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
ACTN4O43707 SNORA67.5-201ENST00000391036 107 ntBASIC1.64□□□□□ -2.15
ACTN4O43707 AL603825.1-201ENST00000438481 80 ntBASIC1.64□□□□□ -2.15
ACTN4O43707 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.64□□□□□ -2.15
ACTN4O43707 AC025627.3-201ENST00000582078 182 ntBASIC1.64□□□□□ -2.15
ACTN4O43707 MIR548AD-201ENST00000584780 82 ntBASIC1.64□□□□□ -2.15
ACTN4O43707 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
ACTN4O43707 RNU1-17P-201ENST00000363022 152 ntBASIC1.63□□□□□ -2.15
ACTN4O43707 MIR582-201ENST00000365731 98 ntBASIC1.63□□□□□ -2.15
ACTN4O43707 MIR19B1-201ENST00000384829 87 ntBASIC1.63□□□□□ -2.15
ACTN4O43707 SNORD110-201ENST00000408189 75 ntBASIC1.63□□□□□ -2.15
ACTN4O43707 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
ACTN4O43707 SNORD124-201ENST00000459577 104 ntBASIC1.63□□□□□ -2.15
ACTN4O43707 MIR548AE1-201ENST00000583292 70 ntBASIC1.63□□□□□ -2.15
ACTN4O43707 Y_RNA.379-201ENST00000365653 102 ntBASIC1.62□□□□□ -2.15
ACTN4O43707 MIR548E-201ENST00000408287 88 ntBASIC1.62□□□□□ -2.15
ACTN4O43707 RNU7-119P-201ENST00000459279 63 ntBASIC1.62□□□□□ -2.15
ACTN4O43707 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
ACTN4O43707 SNORA25.8-201ENST00000364831 128 ntBASIC1.61□□□□□ -2.15
ACTN4O43707 Y_RNA.338-201ENST00000365320 114 ntBASIC1.61□□□□□ -2.15
ACTN4O43707 Y_RNA.676-201ENST00000516393 96 ntBASIC1.61□□□□□ -2.15
ACTN4O43707 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
ACTN4O43707 RNU4-88P-201ENST00000411220 86 ntBASIC1.6□□□□□ -2.15
ACTN4O43707 RNA5SP268-201ENST00000516828 124 ntBASIC1.6□□□□□ -2.15
ACTN4O43707 U6.96-201ENST00000636425 70 ntBASIC1.6□□□□□ -2.15
ACTN4O43707 SNORA9.1-201ENST00000362412 131 ntBASIC1.59□□□□□ -2.15
ACTN4O43707 Y_RNA.325-201ENST00000365171 122 ntBASIC1.59□□□□□ -2.15
ACTN4O43707 SNORA41B-201ENST00000384785 128 ntBASIC1.59□□□□□ -2.15
ACTN4O43707 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
ACTN4O43707 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
ACTN4O43707 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
ACTN4O43707 MIR4303-201ENST00000581299 66 ntBASIC1.59□□□□□ -2.15
ACTN4O43707 MIR18A-201ENST00000362310 71 ntBASIC1.58□□□□□ -2.16
ACTN4O43707 CYP3A54P-201ENST00000566950 75 ntBASIC1.58□□□□□ -2.16
ACTN4O43707 AC011195.1-201ENST00000578177 177 ntBASIC1.57□□□□□ -2.16
ACTN4O43707 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
ACTN4O43707 SNORA36.1-201ENST00000363424 132 ntBASIC1.56□□□□□ -2.16
ACTN4O43707 SNORA17.3-201ENST00000391159 129 ntBASIC1.56□□□□□ -2.16
ACTN4O43707 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.56□□□□□ -2.16
ACTN4O43707 AC068338.1-201ENST00000565567 176 ntBASIC1.56□□□□□ -2.16
ACTN4O43707 MIR378A-201ENST00000362177 66 ntBASIC1.55□□□□□ -2.16
ACTN4O43707 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ACTN4O43707 AL021921.1-201ENST00000442774 93 ntBASIC1.55□□□□□ -2.16
ACTN4O43707 RNU6-1053P-201ENST00000515930 101 ntBASIC1.55□□□□□ -2.16
ACTN4O43707 RNU6-231P-201ENST00000517122 103 ntBASIC1.55□□□□□ -2.16
ACTN4O43707 MIR4498-201ENST00000577599 66 ntBASIC1.55□□□□□ -2.16
ACTN4O43707 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
ACTN4O43707 RNU6-753P-201ENST00000363926 107 ntBASIC1.54□□□□□ -2.16
ACTN4O43707 SNORD114-24-201ENST00000365029 72 ntBASIC1.54□□□□□ -2.16
ACTN4O43707 RNU6-1246P-201ENST00000391064 107 ntBASIC1.54□□□□□ -2.16
ACTN4O43707 snoU13.31-201ENST00000607291 104 ntBASIC1.54□□□□□ -2.16
ACTN4O43707 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
ACTN4O43707 RNU4-45P-201ENST00000365469 141 ntBASIC1.53□□□□□ -2.16
ACTN4O43707 MIR516B1-201ENST00000385211 90 ntBASIC1.53□□□□□ -2.16
ACTN4O43707 SNORD99-201ENST00000408612 74 ntBASIC1.53□□□□□ -2.16
ACTN4O43707 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
ACTN4O43707 RNA5SP255-201ENST00000516370 107 ntBASIC1.53□□□□□ -2.16
ACTN4O43707 MIR7107-201ENST00000611489 80 ntBASIC1.53□□□□□ -2.16
ACTN4O43707 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ACTN4O43707 RNU6-518P-201ENST00000516056 96 ntBASIC1.52□□□□□ -2.17
ACTN4O43707 RNA5SP94-201ENST00000516917 108 ntBASIC1.52□□□□□ -2.17
ACTN4O43707 AC243829.6-201ENST00000612652 106 ntBASIC1.51□□□□□ -2.17
ACTN4O43707 SNORA70.25-201ENST00000612741 95 ntBASIC1.51□□□□□ -2.17
ACTN4O43707 SNORD116.2-201ENST00000391251 93 ntBASIC1.5□□□□□ -2.17
ACTN4O43707 AC108667.1-201ENST00000428618 249 ntBASIC1.5□□□□□ -2.17
ACTN4O43707 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
ACTN4O43707 Y_RNA.74-201ENST00000362911 99 ntBASIC1.49□□□□□ -2.17
ACTN4O43707 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
ACTN4O43707 SNORD116-16-201ENST00000384533 92 ntBASIC1.48□□□□□ -2.17
ACTN4O43707 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
ACTN4O43707 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
ACTN4O43707 MIR4752-201ENST00000579672 72 ntBASIC1.48□□□□□ -2.17
ACTN4O43707 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.48□□□□□ -2.17
ACTN4O43707 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
ACTN4O43707 MIR20A-201ENST00000362279 71 ntBASIC1.47□□□□□ -2.17
ACTN4O43707 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
ACTN4O43707 MIR527-201ENST00000385244 85 ntBASIC1.47□□□□□ -2.17
ACTN4O43707 MIR1255B2-201ENST00000408618 67 ntBASIC1.47□□□□□ -2.17
ACTN4O43707 AC244090.1-201ENST00000441884 93 ntBASIC1.47□□□□□ -2.17
ACTN4O43707 AC090617.8-201ENST00000623339 167 ntBASIC1.47□□□□□ -2.17
ACTN4O43707 RNU4-62P-201ENST00000410125 130 ntBASIC1.46□□□□□ -2.18
ACTN4O43707 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.46□□□□□ -2.18
ACTN4O43707 RNA5SP404-201ENST00000517118 132 ntBASIC1.46□□□□□ -2.18
ACTN4O43707 RNA5SP222-201ENST00000411039 105 ntBASIC1.45□□□□□ -2.18
ACTN4O43707 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 331.3 ms