Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 MIR4315-2-201ENST00000640925 73 ntBASIC0.38□□□□□ -2.35
KLF4O43474 MIR330-201ENST00000362196 94 ntBASIC0.37□□□□□ -2.35
KLF4O43474 Y_RNA.264-201ENST00000364665 102 ntBASIC0.37□□□□□ -2.35
KLF4O43474 RNU6-497P-201ENST00000365316 104 ntBASIC0.37□□□□□ -2.35
KLF4O43474 HMGN2P22-201ENST00000427588 175 ntBASIC0.37□□□□□ -2.35
KLF4O43474 AC097510.1-201ENST00000510945 133 ntBASIC0.37□□□□□ -2.35
KLF4O43474 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
KLF4O43474 Y_RNA.437-201ENST00000384113 113 ntBASIC0.36□□□□□ -2.35
KLF4O43474 Y_RNA.660-201ENST00000516002 120 ntBASIC0.36□□□□□ -2.35
KLF4O43474 MIR548AD-201ENST00000584780 82 ntBASIC0.36□□□□□ -2.35
KLF4O43474 MIR8087-201ENST00000612745 78 ntBASIC0.36□□□□□ -2.35
KLF4O43474 MIR499B-201ENST00000636498 73 ntBASIC0.36□□□□□ -2.35
KLF4O43474 Y_RNA.115-201ENST00000363272 98 ntBASIC0.35□□□□□ -2.35
KLF4O43474 SNORD77.2-201ENST00000391045 68 ntBASIC0.35□□□□□ -2.35
KLF4O43474 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
KLF4O43474 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.35□□□□□ -2.35
KLF4O43474 MIR494-201ENST00000349529 81 ntBASIC0.34□□□□□ -2.36
KLF4O43474 RNU6-208P-201ENST00000362431 107 ntBASIC0.34□□□□□ -2.36
KLF4O43474 MIR501-201ENST00000390204 84 ntBASIC0.34□□□□□ -2.36
KLF4O43474 RNU6-1232P-201ENST00000516299 86 ntBASIC0.34□□□□□ -2.36
KLF4O43474 AC140658.3-201ENST00000567603 271 ntBASIC0.34□□□□□ -2.36
KLF4O43474 MIR4677-201ENST00000584153 80 ntBASIC0.34□□□□□ -2.36
KLF4O43474 AC084368.1-201ENST00000620935 65 ntBASIC0.34□□□□□ -2.36
KLF4O43474 SNORA24B-201ENST00000384176 131 ntBASIC0.33□□□□□ -2.36
KLF4O43474 MIR516B1-201ENST00000385211 90 ntBASIC0.33□□□□□ -2.36
KLF4O43474 SNORD90-201ENST00000391145 111 ntBASIC0.33□□□□□ -2.36
KLF4O43474 Y_RNA.607-201ENST00000410597 98 ntBASIC0.33□□□□□ -2.36
KLF4O43474 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.33□□□□□ -2.36
KLF4O43474 MIR5588-201ENST00000581890 63 ntBASIC0.33□□□□□ -2.36
KLF4O43474 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
KLF4O43474 RNU6-54P-201ENST00000365563 107 ntBASIC0.32□□□□□ -2.36
KLF4O43474 Y_RNA.374-201ENST00000365606 101 ntBASIC0.32□□□□□ -2.36
KLF4O43474 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
KLF4O43474 MIR892B-201ENST00000401279 77 ntBASIC0.32□□□□□ -2.36
KLF4O43474 AL109933.3-201ENST00000619095 188 ntBASIC0.32□□□□□ -2.36
KLF4O43474 Y_RNA.30-201ENST00000362572 97 ntBASIC0.31□□□□□ -2.36
KLF4O43474 RNU6-681P-201ENST00000364012 104 ntBASIC0.31□□□□□ -2.36
KLF4O43474 RNU6-380P-201ENST00000410207 107 ntBASIC0.31□□□□□ -2.36
KLF4O43474 AC022137.1-201ENST00000483735 151 ntBASIC0.31□□□□□ -2.36
KLF4O43474 Y_RNA.73-201ENST00000362910 113 ntBASIC0.3□□□□□ -2.36
KLF4O43474 RNU6-624P-201ENST00000363411 107 ntBASIC0.3□□□□□ -2.36
KLF4O43474 SNORD114-29-201ENST00000364819 70 ntBASIC0.3□□□□□ -2.36
KLF4O43474 MIR610-201ENST00000385139 96 ntBASIC0.3□□□□□ -2.36
KLF4O43474 RNU6-127P-201ENST00000390897 107 ntBASIC0.3□□□□□ -2.36
KLF4O43474 SNORA75.1-201ENST00000391130 148 ntBASIC0.3□□□□□ -2.36
KLF4O43474 RNU6-782P-201ENST00000516852 104 ntBASIC0.3□□□□□ -2.36
KLF4O43474 RNU6-154P-201ENST00000384306 106 ntBASIC0.29□□□□□ -2.36
KLF4O43474 SNORD75.2-201ENST00000408784 58 ntBASIC0.29□□□□□ -2.36
KLF4O43474 MIR1197-201ENST00000408818 88 ntBASIC0.29□□□□□ -2.36
KLF4O43474 RNU6-592P-201ENST00000411333 103 ntBASIC0.29□□□□□ -2.36
KLF4O43474 RNU7-24P-201ENST00000458867 62 ntBASIC0.29□□□□□ -2.36
KLF4O43474 RNU6-495P-201ENST00000362995 107 ntBASIC0.28□□□□□ -2.36
KLF4O43474 RNU6-979P-201ENST00000383896 107 ntBASIC0.28□□□□□ -2.36
KLF4O43474 snoU13.17-201ENST00000458802 104 ntBASIC0.28□□□□□ -2.36
KLF4O43474 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
KLF4O43474 SNORD73B-201ENST00000364394 72 ntBASIC0.27□□□□□ -2.37
KLF4O43474 RNU6-129P-201ENST00000391022 107 ntBASIC0.27□□□□□ -2.37
KLF4O43474 RNU6-274P-201ENST00000459566 107 ntBASIC0.27□□□□□ -2.37
KLF4O43474 RNU6-557P-201ENST00000516842 110 ntBASIC0.27□□□□□ -2.37
KLF4O43474 MIR20A-201ENST00000362279 71 ntBASIC0.26□□□□□ -2.37
KLF4O43474 RNU6-161P-201ENST00000363051 106 ntBASIC0.26□□□□□ -2.37
KLF4O43474 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.26□□□□□ -2.37
KLF4O43474 RNU7-171P-201ENST00000459581 62 ntBASIC0.26□□□□□ -2.37
KLF4O43474 RNU6-1108P-201ENST00000516308 104 ntBASIC0.26□□□□□ -2.37
KLF4O43474 SCARNA17.3-201ENST00000516381 125 ntBASIC0.26□□□□□ -2.37
KLF4O43474 SNORA62.5-201ENST00000516634 120 ntBASIC0.26□□□□□ -2.37
KLF4O43474 RNU6-762P-201ENST00000517107 102 ntBASIC0.26□□□□□ -2.37
KLF4O43474 MIR4514-201ENST00000581410 57 ntBASIC0.26□□□□□ -2.37
KLF4O43474 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
KLF4O43474 MIR4773-1-201ENST00000637203 78 ntBASIC0.26□□□□□ -2.37
KLF4O43474 RNA5SP257-201ENST00000363023 116 ntBASIC0.25□□□□□ -2.37
KLF4O43474 MIR643-201ENST00000385267 97 ntBASIC0.25□□□□□ -2.37
KLF4O43474 SNORA26.2-201ENST00000390922 122 ntBASIC0.25□□□□□ -2.37
KLF4O43474 YWHAEP3-201ENST00000582767 121 ntBASIC0.25□□□□□ -2.37
KLF4O43474 MIR2909-201ENST00000617113 69 ntBASIC0.25□□□□□ -2.37
KLF4O43474 RNU6-1276P-201ENST00000365372 104 ntBASIC0.24□□□□□ -2.37
KLF4O43474 Y_RNA.371-201ENST00000365591 113 ntBASIC0.24□□□□□ -2.37
KLF4O43474 MIR652-201ENST00000385278 98 ntBASIC0.24□□□□□ -2.37
KLF4O43474 MIR1302-4-201ENST00000408701 150 ntBASIC0.24□□□□□ -2.37
KLF4O43474 SCARNA11.2-201ENST00000517183 154 ntBASIC0.24□□□□□ -2.37
KLF4O43474 MIR548AE1-201ENST00000583292 70 ntBASIC0.24□□□□□ -2.37
KLF4O43474 RNU6-686P-201ENST00000364839 107 ntBASIC0.23□□□□□ -2.37
KLF4O43474 Y_RNA.606-201ENST00000410579 103 ntBASIC0.23□□□□□ -2.37
KLF4O43474 AC062037.1-201ENST00000605302 128 ntBASIC0.23□□□□□ -2.37
KLF4O43474 U6.81-201ENST00000612550 106 ntBASIC0.23□□□□□ -2.37
KLF4O43474 Y_RNA.12-201ENST00000362393 112 ntBASIC0.22□□□□□ -2.37
KLF4O43474 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
KLF4O43474 RNU6-382P-201ENST00000365181 106 ntBASIC0.22□□□□□ -2.37
KLF4O43474 AC244090.1-201ENST00000441884 93 ntBASIC0.22□□□□□ -2.37
KLF4O43474 MIR4743-201ENST00000584576 69 ntBASIC0.22□□□□□ -2.37
KLF4O43474 RNU6-824P-201ENST00000363724 104 ntBASIC0.21□□□□□ -2.38
KLF4O43474 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
KLF4O43474 SNORD2-201ENST00000459163 69 ntBASIC0.21□□□□□ -2.38
KLF4O43474 Y_RNA.681-201ENST00000516445 113 ntBASIC0.21□□□□□ -2.38
KLF4O43474 MIR3925-201ENST00000584674 77 ntBASIC0.21□□□□□ -2.38
KLF4O43474 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
KLF4O43474 AL691482.2-201ENST00000457453 84 ntBASIC0.2□□□□□ -2.38
KLF4O43474 SNORD42B-201ENST00000458893 67 ntBASIC0.2□□□□□ -2.38
KLF4O43474 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.2□□□□□ -2.38
KLF4O43474 RNU7-188P-201ENST00000517063 64 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 248.7 ms