Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SNORA63.2-201ENST00000362603 126 ntBASIC0.14□□□□□ -2.39
CDX4O14627 MIR643-201ENST00000385267 97 ntBASIC0.14□□□□□ -2.39
CDX4O14627 U3.27-201ENST00000391237 200 ntBASIC0.14□□□□□ -2.39
CDX4O14627 MIR1236-201ENST00000408340 102 ntBASIC0.14□□□□□ -2.39
CDX4O14627 Y_RNA.620-201ENST00000411009 88 ntBASIC0.14□□□□□ -2.39
CDX4O14627 MIR4796-201ENST00000580742 81 ntBASIC0.14□□□□□ -2.39
CDX4O14627 MIR4802-201ENST00000581881 80 ntBASIC0.14□□□□□ -2.39
CDX4O14627 MIR548AE1-201ENST00000583292 70 ntBASIC0.14□□□□□ -2.39
CDX4O14627 MIR4677-201ENST00000584153 80 ntBASIC0.14□□□□□ -2.39
CDX4O14627 MIR548AD-201ENST00000584780 82 ntBASIC0.14□□□□□ -2.39
CDX4O14627 U7.6-201ENST00000610841 64 ntBASIC0.14□□□□□ -2.39
CDX4O14627 RNU6-633P-201ENST00000362612 103 ntBASIC0.13□□□□□ -2.39
CDX4O14627 RNU6-219P-201ENST00000364728 107 ntBASIC0.13□□□□□ -2.39
CDX4O14627 RNU6-54P-201ENST00000365563 107 ntBASIC0.13□□□□□ -2.39
CDX4O14627 SNORA25.13-201ENST00000516395 103 ntBASIC0.13□□□□□ -2.39
CDX4O14627 MIR3925-201ENST00000584674 77 ntBASIC0.13□□□□□ -2.39
CDX4O14627 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
CDX4O14627 Y_RNA.17-201ENST00000362433 111 ntBASIC0.12□□□□□ -2.39
CDX4O14627 RNU6-1134P-201ENST00000365156 101 ntBASIC0.12□□□□□ -2.39
CDX4O14627 Y_RNA.558-201ENST00000384685 113 ntBASIC0.12□□□□□ -2.39
CDX4O14627 MIR519C-201ENST00000385053 87 ntBASIC0.12□□□□□ -2.39
CDX4O14627 MIR516B1-201ENST00000385211 90 ntBASIC0.12□□□□□ -2.39
CDX4O14627 MIR216B-201ENST00000390186 82 ntBASIC0.12□□□□□ -2.39
CDX4O14627 MTATP6P29-201ENST00000415057 132 ntBASIC0.12□□□□□ -2.39
CDX4O14627 snoU13.17-201ENST00000458802 104 ntBASIC0.12□□□□□ -2.39
CDX4O14627 Y_RNA.694-201ENST00000516677 117 ntBASIC0.12□□□□□ -2.39
CDX4O14627 RNU6-762P-201ENST00000517107 102 ntBASIC0.12□□□□□ -2.39
CDX4O14627 MIR5582-201ENST00000579697 68 ntBASIC0.12□□□□□ -2.39
CDX4O14627 MIR4768-201ENST00000585270 74 ntBASIC0.12□□□□□ -2.39
CDX4O14627 uc_338.10-201ENST00000621872 182 ntBASIC0.12□□□□□ -2.39
CDX4O14627 RNY4P3-201ENST00000365254 95 ntBASIC0.11□□□□□ -2.39
CDX4O14627 Y_RNA.437-201ENST00000384113 113 ntBASIC0.11□□□□□ -2.39
CDX4O14627 SNORA24B-201ENST00000384176 131 ntBASIC0.11□□□□□ -2.39
CDX4O14627 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
CDX4O14627 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CDX4O14627 RNU6-1298P-201ENST00000362456 101 ntBASIC0.1□□□□□ -2.39
CDX4O14627 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
CDX4O14627 RNU6-652P-201ENST00000365488 107 ntBASIC0.1□□□□□ -2.39
CDX4O14627 Y_RNA.407-201ENST00000383986 113 ntBASIC0.1□□□□□ -2.39
CDX4O14627 MIR652-201ENST00000385278 98 ntBASIC0.1□□□□□ -2.39
CDX4O14627 Y_RNA.593-201ENST00000410292 98 ntBASIC0.1□□□□□ -2.39
CDX4O14627 RNU6-782P-201ENST00000516852 104 ntBASIC0.1□□□□□ -2.39
CDX4O14627 SCARNA11.2-201ENST00000517183 154 ntBASIC0.1□□□□□ -2.39
CDX4O14627 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
CDX4O14627 AC084368.1-201ENST00000620935 65 ntBASIC0.1□□□□□ -2.39
CDX4O14627 MIR548BB-201ENST00000626714 66 ntBASIC0.1□□□□□ -2.39
CDX4O14627 RNU6-154P-201ENST00000384306 106 ntBASIC0.09□□□□□ -2.4
CDX4O14627 MIR593-201ENST00000384856 100 ntBASIC0.09□□□□□ -2.4
CDX4O14627 MIR548H2-201ENST00000408874 88 ntBASIC0.09□□□□□ -2.4
CDX4O14627 Y_RNA.611-201ENST00000410682 108 ntBASIC0.09□□□□□ -2.4
CDX4O14627 SNORD42B-201ENST00000458893 67 ntBASIC0.09□□□□□ -2.4
CDX4O14627 SNORA42.1-201ENST00000363515 137 ntBASIC0.08□□□□□ -2.4
CDX4O14627 SNORD115-37-201ENST00000363768 82 ntBASIC0.08□□□□□ -2.4
CDX4O14627 RNU6-294P-201ENST00000364999 102 ntBASIC0.08□□□□□ -2.4
CDX4O14627 RNU6-497P-201ENST00000365316 104 ntBASIC0.08□□□□□ -2.4
CDX4O14627 RNU6-675P-201ENST00000384236 104 ntBASIC0.08□□□□□ -2.4
CDX4O14627 RNU6-1177P-201ENST00000391058 104 ntBASIC0.08□□□□□ -2.4
CDX4O14627 AC093729.1-201ENST00000513074 128 ntBASIC0.08□□□□□ -2.4
CDX4O14627 RNU7-188P-201ENST00000517063 64 ntBASIC0.08□□□□□ -2.4
CDX4O14627 RNA5SP170-201ENST00000517150 101 ntBASIC0.08□□□□□ -2.4
CDX4O14627 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.08□□□□□ -2.4
CDX4O14627 RNU5F-1-201ENST00000362507 117 ntBASIC0.07□□□□□ -2.4
CDX4O14627 Y_RNA.73-201ENST00000362910 113 ntBASIC0.07□□□□□ -2.4
CDX4O14627 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
CDX4O14627 Y_RNA.369-201ENST00000365568 117 ntBASIC0.07□□□□□ -2.4
CDX4O14627 MIR610-201ENST00000385139 96 ntBASIC0.07□□□□□ -2.4
CDX4O14627 Y_RNA.660-201ENST00000516002 120 ntBASIC0.07□□□□□ -2.4
CDX4O14627 IGLL4P-201ENST00000614590 133 ntBASIC0.07□□□□□ -2.4
CDX4O14627 AL627230.5-201ENST00000619807 58 ntBASIC0.07□□□□□ -2.4
CDX4O14627 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
CDX4O14627 RNU6-495P-201ENST00000362995 107 ntBASIC0.06□□□□□ -2.4
CDX4O14627 RNU6-161P-201ENST00000363051 106 ntBASIC0.06□□□□□ -2.4
CDX4O14627 RNU6-824P-201ENST00000363724 104 ntBASIC0.06□□□□□ -2.4
CDX4O14627 RNY1P1-201ENST00000364372 112 ntBASIC0.06□□□□□ -2.4
CDX4O14627 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
CDX4O14627 RN7SL660P-201ENST00000614852 299 ntBASIC0.06□□□□□ -2.4
CDX4O14627 RNU6-382P-201ENST00000365181 106 ntBASIC0.05□□□□□ -2.4
CDX4O14627 MIR106A-201ENST00000384870 81 ntBASIC0.05□□□□□ -2.4
CDX4O14627 MIR145-201ENST00000384967 88 ntBASIC0.05□□□□□ -2.4
CDX4O14627 SNORA75.1-201ENST00000391130 148 ntBASIC0.05□□□□□ -2.4
CDX4O14627 MIR876-201ENST00000401147 81 ntBASIC0.05□□□□□ -2.4
CDX4O14627 RNA5SP163-201ENST00000410304 99 ntBASIC0.05□□□□□ -2.4
CDX4O14627 AC097510.1-201ENST00000510945 133 ntBASIC0.05□□□□□ -2.4
CDX4O14627 AC140658.3-201ENST00000567603 271 ntBASIC0.05□□□□□ -2.4
CDX4O14627 MIR494-201ENST00000349529 81 ntBASIC0.04□□□□□ -2.4
CDX4O14627 RNA5SP98-201ENST00000363158 137 ntBASIC0.04□□□□□ -2.4
CDX4O14627 Y_RNA.185-201ENST00000363894 100 ntBASIC0.04□□□□□ -2.4
CDX4O14627 SNORD114-29-201ENST00000364819 70 ntBASIC0.04□□□□□ -2.4
CDX4O14627 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
CDX4O14627 AL450471.1-201ENST00000447509 127 ntBASIC0.04□□□□□ -2.4
CDX4O14627 RNU6-1108P-201ENST00000516308 104 ntBASIC0.04□□□□□ -2.4
CDX4O14627 SCARNA17.3-201ENST00000516381 125 ntBASIC0.04□□□□□ -2.4
CDX4O14627 MIR4773-1-201ENST00000637203 78 ntBASIC0.04□□□□□ -2.4
CDX4O14627 RNU6-208P-201ENST00000362431 107 ntBASIC0.03□□□□□ -2.4
CDX4O14627 RNU6-302P-201ENST00000365249 107 ntBASIC0.03□□□□□ -2.4
CDX4O14627 Y_RNA.371-201ENST00000365591 113 ntBASIC0.03□□□□□ -2.4
CDX4O14627 MIR582-201ENST00000365731 98 ntBASIC0.03□□□□□ -2.4
CDX4O14627 SNORD75.2-201ENST00000408784 58 ntBASIC0.03□□□□□ -2.4
CDX4O14627 RNU6-175P-201ENST00000516896 107 ntBASIC0.03□□□□□ -2.4
CDX4O14627 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms