Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 AC026421.1-201ENST00000519101 163 ntBASIC-0.38□□□□□ -2.47
NKX6-3A6NJ46 MIR4802-201ENST00000581881 80 ntBASIC-0.38□□□□□ -2.47
NKX6-3A6NJ46 SNORA63.2-201ENST00000362603 126 ntBASIC-0.39□□□□□ -2.47
NKX6-3A6NJ46 SNORD90-201ENST00000391145 111 ntBASIC-0.39□□□□□ -2.47
NKX6-3A6NJ46 MIR3666-201ENST00000607845 111 ntBASIC-0.39□□□□□ -2.47
NKX6-3A6NJ46 MIR4788-201ENST00000639104 80 ntBASIC-0.39□□□□□ -2.47
NKX6-3A6NJ46 MIR655-201ENST00000362159 97 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 RNA5SP275-201ENST00000363936 118 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 AC097510.1-201ENST00000510945 133 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 SNORA18.5-201ENST00000516616 101 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 RNU6-537P-201ENST00000517277 103 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 MIR4636-201ENST00000582271 80 ntBASIC-0.4□□□□□ -2.47
NKX6-3A6NJ46 SNORD114-4-201ENST00000363962 75 ntBASIC-0.41□□□□□ -2.48
NKX6-3A6NJ46 RNU6-35P-201ENST00000384530 107 ntBASIC-0.41□□□□□ -2.48
NKX6-3A6NJ46 RNA5SP300-201ENST00000391197 107 ntBASIC-0.41□□□□□ -2.48
NKX6-3A6NJ46 RNU6-589P-201ENST00000516485 107 ntBASIC-0.41□□□□□ -2.48
NKX6-3A6NJ46 MIR4263-201ENST00000584745 83 ntBASIC-0.41□□□□□ -2.48
NKX6-3A6NJ46 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.42□□□□□ -2.48
NKX6-3A6NJ46 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
NKX6-3A6NJ46 AP001180.6-201ENST00000584918 159 ntBASIC-0.42□□□□□ -2.48
NKX6-3A6NJ46 SNORA49-201ENST00000386157 136 ntBASIC-0.43□□□□□ -2.48
NKX6-3A6NJ46 MIR548E-201ENST00000408287 88 ntBASIC-0.43□□□□□ -2.48
NKX6-3A6NJ46 AL445193.1-201ENST00000441183 141 ntBASIC-0.43□□□□□ -2.48
NKX6-3A6NJ46 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
NKX6-3A6NJ46 RNU6-479P-201ENST00000516348 105 ntBASIC-0.43□□□□□ -2.48
NKX6-3A6NJ46 MIR8064-201ENST00000612863 90 ntBASIC-0.43□□□□□ -2.48
NKX6-3A6NJ46 U7.3-201ENST00000616123 62 ntBASIC-0.43□□□□□ -2.48
NKX6-3A6NJ46 SNORD115-25-201ENST00000362619 82 ntBASIC-0.44□□□□□ -2.48
NKX6-3A6NJ46 SNORD116-10-201ENST00000363791 102 ntBASIC-0.44□□□□□ -2.48
NKX6-3A6NJ46 MIR4493-201ENST00000584016 73 ntBASIC-0.44□□□□□ -2.48
NKX6-3A6NJ46 MIR450A1-201ENST00000362262 91 ntBASIC-0.45□□□□□ -2.48
NKX6-3A6NJ46 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.45□□□□□ -2.48
NKX6-3A6NJ46 RNY4P3-201ENST00000365254 95 ntBASIC-0.45□□□□□ -2.48
NKX6-3A6NJ46 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.45□□□□□ -2.48
NKX6-3A6NJ46 RNU2-51P-201ENST00000410708 197 ntBASIC-0.45□□□□□ -2.48
NKX6-3A6NJ46 MTATP6P29-201ENST00000415057 132 ntBASIC-0.45□□□□□ -2.48
NKX6-3A6NJ46 AL606753.1-201ENST00000427435 87 ntBASIC-0.45□□□□□ -2.48
NKX6-3A6NJ46 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.45□□□□□ -2.48
NKX6-3A6NJ46 RNU6-834P-201ENST00000362367 110 ntBASIC-0.46□□□□□ -2.48
NKX6-3A6NJ46 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.46□□□□□ -2.48
NKX6-3A6NJ46 SNORD114-11-201ENST00000363738 75 ntBASIC-0.46□□□□□ -2.48
NKX6-3A6NJ46 RNU6-901P-201ENST00000384593 106 ntBASIC-0.46□□□□□ -2.48
NKX6-3A6NJ46 MIR9-2-201ENST00000384838 87 ntBASIC-0.46□□□□□ -2.48
NKX6-3A6NJ46 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.46□□□□□ -2.48
NKX6-3A6NJ46 uc_338.36-201ENST00000622331 158 ntBASIC-0.46□□□□□ -2.48
NKX6-3A6NJ46 MIR101-1-201ENST00000362265 75 ntBASIC-0.47□□□□□ -2.48
NKX6-3A6NJ46 RNU6-766P-201ENST00000362478 107 ntBASIC-0.47□□□□□ -2.48
NKX6-3A6NJ46 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.47□□□□□ -2.48
NKX6-3A6NJ46 SNORA24B-201ENST00000384176 131 ntBASIC-0.47□□□□□ -2.48
NKX6-3A6NJ46 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
NKX6-3A6NJ46 AL590491.3-201ENST00000610731 82 ntBASIC-0.47□□□□□ -2.48
NKX6-3A6NJ46 RNU6-495P-201ENST00000362995 107 ntBASIC-0.48□□□□□ -2.49
NKX6-3A6NJ46 RNU6-990P-201ENST00000364385 104 ntBASIC-0.48□□□□□ -2.49
NKX6-3A6NJ46 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
NKX6-3A6NJ46 AL603908.1-201ENST00000406098 201 ntBASIC-0.48□□□□□ -2.49
NKX6-3A6NJ46 Z95118.1-201ENST00000421372 247 ntBASIC-0.48□□□□□ -2.49
NKX6-3A6NJ46 snoU13.13-201ENST00000458842 104 ntBASIC-0.48□□□□□ -2.49
NKX6-3A6NJ46 AC145423.2-201ENST00000610631 239 ntBASIC-0.48□□□□□ -2.49
NKX6-3A6NJ46 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.49□□□□□ -2.49
NKX6-3A6NJ46 AL031737.1-201ENST00000450125 223 ntBASIC-0.49□□□□□ -2.49
NKX6-3A6NJ46 MIR4773-1-201ENST00000637203 78 ntBASIC-0.49□□□□□ -2.49
NKX6-3A6NJ46 SNORA32.3-201ENST00000384772 121 ntBASIC-0.5□□□□□ -2.49
NKX6-3A6NJ46 MIR1265-201ENST00000408444 86 ntBASIC-0.5□□□□□ -2.49
NKX6-3A6NJ46 RNU6-284P-201ENST00000411105 106 ntBASIC-0.5□□□□□ -2.49
NKX6-3A6NJ46 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.5□□□□□ -2.49
NKX6-3A6NJ46 RNA5SP66-201ENST00000517178 101 ntBASIC-0.5□□□□□ -2.49
NKX6-3A6NJ46 MIR4796-201ENST00000580742 81 ntBASIC-0.5□□□□□ -2.49
NKX6-3A6NJ46 MIR548AZ-201ENST00000616567 95 ntBASIC-0.5□□□□□ -2.49
NKX6-3A6NJ46 RNU5F-1-201ENST00000362507 117 ntBASIC-0.51□□□□□ -2.49
NKX6-3A6NJ46 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.51□□□□□ -2.49
NKX6-3A6NJ46 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.51□□□□□ -2.49
NKX6-3A6NJ46 RNU6-900P-201ENST00000384498 102 ntBASIC-0.51□□□□□ -2.49
NKX6-3A6NJ46 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.51□□□□□ -2.49
NKX6-3A6NJ46 snoU13.17-201ENST00000458802 104 ntBASIC-0.51□□□□□ -2.49
NKX6-3A6NJ46 SNORD2-201ENST00000459163 69 ntBASIC-0.51□□□□□ -2.49
NKX6-3A6NJ46 RNU6-382P-201ENST00000365181 106 ntBASIC-0.52□□□□□ -2.49
NKX6-3A6NJ46 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.52□□□□□ -2.49
NKX6-3A6NJ46 RNY4P18-201ENST00000391107 89 ntBASIC-0.52□□□□□ -2.49
NKX6-3A6NJ46 SNORD75.2-201ENST00000408784 58 ntBASIC-0.52□□□□□ -2.49
NKX6-3A6NJ46 RNA5SP451-201ENST00000410588 110 ntBASIC-0.52□□□□□ -2.49
NKX6-3A6NJ46 MTATP8P2-201ENST00000435212 202 ntBASIC-0.52□□□□□ -2.49
NKX6-3A6NJ46 RNU6-758P-201ENST00000516292 89 ntBASIC-0.52□□□□□ -2.49
NKX6-3A6NJ46 RNU7-153P-201ENST00000516455 62 ntBASIC-0.52□□□□□ -2.49
NKX6-3A6NJ46 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 SNORA63.6-201ENST00000364921 119 ntBASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 SNORD56B-201ENST00000384713 71 ntBASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 MIR203A-201ENST00000384836 110 ntBASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 MIR604-201ENST00000384880 94 ntBASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 MIR1236-201ENST00000408340 102 ntBASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 RNA5SP25-201ENST00000410815 110 ntBASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.53□□□□□ -2.49
NKX6-3A6NJ46 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
NKX6-3A6NJ46 RNA5SP476-201ENST00000516613 103 ntBASIC-0.54□□□□□ -2.5
NKX6-3A6NJ46 AC006254.2-201ENST00000603259 279 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms