Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MIR652-201ENST00000385278 98 ntBASIC1.59□□□□□ -2.15
RCCD1A6NED2 SNORD113-2-201ENST00000391082 72 ntBASIC1.59□□□□□ -2.15
RCCD1A6NED2 RNA5SP268-201ENST00000516828 124 ntBASIC1.59□□□□□ -2.15
RCCD1A6NED2 RNU1-124P-201ENST00000363861 145 ntBASIC1.58□□□□□ -2.16
RCCD1A6NED2 MIR618-201ENST00000385287 98 ntBASIC1.58□□□□□ -2.16
RCCD1A6NED2 SNORD110-201ENST00000408189 75 ntBASIC1.58□□□□□ -2.16
RCCD1A6NED2 BX248123.2-201ENST00000606318 124 ntBASIC1.58□□□□□ -2.16
RCCD1A6NED2 U2.7-201ENST00000619197 100 ntBASIC1.58□□□□□ -2.16
RCCD1A6NED2 RNU6-446P-201ENST00000362827 106 ntBASIC1.57□□□□□ -2.16
RCCD1A6NED2 SNORA36.1-201ENST00000363424 132 ntBASIC1.57□□□□□ -2.16
RCCD1A6NED2 RNU6-698P-201ENST00000363523 107 ntBASIC1.57□□□□□ -2.16
RCCD1A6NED2 SNORA25.8-201ENST00000364831 128 ntBASIC1.57□□□□□ -2.16
RCCD1A6NED2 RNU6-34P-201ENST00000364874 107 ntBASIC1.57□□□□□ -2.16
RCCD1A6NED2 SNORA75.1-201ENST00000391130 148 ntBASIC1.57□□□□□ -2.16
RCCD1A6NED2 SNORD99-201ENST00000408612 74 ntBASIC1.57□□□□□ -2.16
RCCD1A6NED2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
RCCD1A6NED2 SNORA33.1-201ENST00000364957 130 ntBASIC1.56□□□□□ -2.16
RCCD1A6NED2 SNORA67.5-201ENST00000391036 107 ntBASIC1.56□□□□□ -2.16
RCCD1A6NED2 AL603825.1-201ENST00000438481 80 ntBASIC1.56□□□□□ -2.16
RCCD1A6NED2 RNU7-174P-201ENST00000516248 59 ntBASIC1.56□□□□□ -2.16
RCCD1A6NED2 RNA5SP404-201ENST00000517118 132 ntBASIC1.56□□□□□ -2.16
RCCD1A6NED2 Y_RNA.125-201ENST00000363371 111 ntBASIC1.55□□□□□ -2.16
RCCD1A6NED2 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
RCCD1A6NED2 MIR4473-201ENST00000583731 91 ntBASIC1.55□□□□□ -2.16
RCCD1A6NED2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
RCCD1A6NED2 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
RCCD1A6NED2 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
RCCD1A6NED2 AC108667.1-201ENST00000428618 249 ntBASIC1.54□□□□□ -2.16
RCCD1A6NED2 RNA5SP94-201ENST00000516917 108 ntBASIC1.54□□□□□ -2.16
RCCD1A6NED2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.54□□□□□ -2.16
RCCD1A6NED2 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
RCCD1A6NED2 MIR548AE1-201ENST00000583292 70 ntBASIC1.53□□□□□ -2.16
RCCD1A6NED2 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
RCCD1A6NED2 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
RCCD1A6NED2 Y_RNA.722-201ENST00000517279 114 ntBASIC1.52□□□□□ -2.17
RCCD1A6NED2 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
RCCD1A6NED2 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
RCCD1A6NED2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.52□□□□□ -2.17
RCCD1A6NED2 MIR7107-201ENST00000611489 80 ntBASIC1.52□□□□□ -2.17
RCCD1A6NED2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RCCD1A6NED2 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
RCCD1A6NED2 MIR548E-201ENST00000408287 88 ntBASIC1.51□□□□□ -2.17
RCCD1A6NED2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
RCCD1A6NED2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
RCCD1A6NED2 MIR26B-201ENST00000362251 77 ntBASIC1.5□□□□□ -2.17
RCCD1A6NED2 MIR582-201ENST00000365731 98 ntBASIC1.5□□□□□ -2.17
RCCD1A6NED2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.5□□□□□ -2.17
RCCD1A6NED2 MIR378A-201ENST00000362177 66 ntBASIC1.49□□□□□ -2.17
RCCD1A6NED2 RNU6-808P-201ENST00000391233 108 ntBASIC1.49□□□□□ -2.17
RCCD1A6NED2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RCCD1A6NED2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.48□□□□□ -2.17
RCCD1A6NED2 U4.4-201ENST00000620626 117 ntBASIC1.48□□□□□ -2.17
RCCD1A6NED2 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
RCCD1A6NED2 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
RCCD1A6NED2 RNU4-62P-201ENST00000410125 130 ntBASIC1.46□□□□□ -2.18
RCCD1A6NED2 RNA5SP222-201ENST00000411039 105 ntBASIC1.46□□□□□ -2.18
RCCD1A6NED2 MIR7978-201ENST00000636158 59 ntBASIC1.46□□□□□ -2.18
RCCD1A6NED2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.45□□□□□ -2.18
RCCD1A6NED2 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
RCCD1A6NED2 SNORA70.25-201ENST00000612741 95 ntBASIC1.45□□□□□ -2.18
RCCD1A6NED2 U6.96-201ENST00000636425 70 ntBASIC1.45□□□□□ -2.18
RCCD1A6NED2 snoU13.31-201ENST00000607291 104 ntBASIC1.44□□□□□ -2.18
RCCD1A6NED2 Y_RNA.246-201ENST00000364495 108 ntBASIC1.43□□□□□ -2.18
RCCD1A6NED2 SNORD113-4-201ENST00000364802 75 ntBASIC1.43□□□□□ -2.18
RCCD1A6NED2 CYP3A54P-201ENST00000566950 75 ntBASIC1.43□□□□□ -2.18
RCCD1A6NED2 MIR4498-201ENST00000577599 66 ntBASIC1.43□□□□□ -2.18
RCCD1A6NED2 MIR5706-201ENST00000579841 80 ntBASIC1.43□□□□□ -2.18
RCCD1A6NED2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
RCCD1A6NED2 RNU6-520P-201ENST00000384717 104 ntBASIC1.42□□□□□ -2.18
RCCD1A6NED2 AP1B1P2-201ENST00000416196 106 ntBASIC1.42□□□□□ -2.18
RCCD1A6NED2 AL353765.1-201ENST00000605514 183 ntBASIC1.42□□□□□ -2.18
RCCD1A6NED2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
RCCD1A6NED2 RNU6-936P-201ENST00000384005 107 ntBASIC1.41□□□□□ -2.18
RCCD1A6NED2 MIR4752-201ENST00000579672 72 ntBASIC1.41□□□□□ -2.18
RCCD1A6NED2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
RCCD1A6NED2 MIR20A-201ENST00000362279 71 ntBASIC1.4□□□□□ -2.19
RCCD1A6NED2 MIR516B1-201ENST00000385211 90 ntBASIC1.4□□□□□ -2.19
RCCD1A6NED2 AC244090.1-201ENST00000441884 93 ntBASIC1.4□□□□□ -2.19
RCCD1A6NED2 AL021921.1-201ENST00000442774 93 ntBASIC1.4□□□□□ -2.19
RCCD1A6NED2 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
RCCD1A6NED2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.4□□□□□ -2.19
RCCD1A6NED2 HMGN2P22-201ENST00000427588 175 ntBASIC1.39□□□□□ -2.19
RCCD1A6NED2 AC243829.6-201ENST00000612652 106 ntBASIC1.39□□□□□ -2.19
RCCD1A6NED2 Y_RNA.325-201ENST00000365171 122 ntBASIC1.36□□□□□ -2.19
RCCD1A6NED2 RNU6-1184P-201ENST00000384588 108 ntBASIC1.36□□□□□ -2.19
RCCD1A6NED2 SNORD2-201ENST00000459163 69 ntBASIC1.36□□□□□ -2.19
RCCD1A6NED2 SNORA36.2-201ENST00000384004 127 ntBASIC1.35□□□□□ -2.19
RCCD1A6NED2 RNU7-119P-201ENST00000459279 63 ntBASIC1.35□□□□□ -2.19
RCCD1A6NED2 SNORA9.1-201ENST00000362412 131 ntBASIC1.34□□□□□ -2.19
RCCD1A6NED2 RNA5SP517-201ENST00000364724 117 ntBASIC1.34□□□□□ -2.19
RCCD1A6NED2 SNORA41B-201ENST00000384785 128 ntBASIC1.34□□□□□ -2.19
RCCD1A6NED2 RNU6-518P-201ENST00000516056 96 ntBASIC1.34□□□□□ -2.19
RCCD1A6NED2 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
RCCD1A6NED2 MIR4661-201ENST00000582720 75 ntBASIC1.34□□□□□ -2.19
RCCD1A6NED2 RNU1-29P-201ENST00000606574 126 ntBASIC1.34□□□□□ -2.19
RCCD1A6NED2 U7.6-201ENST00000610841 64 ntBASIC1.34□□□□□ -2.19
RCCD1A6NED2 RNU6-1312P-201ENST00000362425 108 ntBASIC1.33□□□□□ -2.2
RCCD1A6NED2 AC069271.1-201ENST00000445577 156 ntBASIC1.33□□□□□ -2.2
RCCD1A6NED2 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
RCCD1A6NED2 MIR140-201ENST00000385282 100 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms