Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU5F-1-201ENST00000362507 117 ntBASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 Y_RNA.73-201ENST00000362910 113 ntBASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-848P-201ENST00000515948 107 ntBASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-617P-201ENST00000516147 107 ntBASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-473P-201ENST00000516164 107 ntBASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-1049P-201ENST00000516414 107 ntBASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-762P-201ENST00000517107 102 ntBASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 MIR548O2-201ENST00000616090 70 ntBASIC0.4□□□□□ -2.35
CCDC163A0A0D9SF12 SNORA25.13-201ENST00000516395 103 ntBASIC0.39□□□□□ -2.35
CCDC163A0A0D9SF12 uc_338.10-201ENST00000621872 182 ntBASIC0.39□□□□□ -2.35
CCDC163A0A0D9SF12 Y_RNA.43-201ENST00000362670 111 ntBASIC0.38□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
CCDC163A0A0D9SF12 MIR450A2-201ENST00000385022 100 ntBASIC0.38□□□□□ -2.35
CCDC163A0A0D9SF12 HMGN2P22-201ENST00000427588 175 ntBASIC0.38□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-54P-201ENST00000365563 107 ntBASIC0.37□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-675P-201ENST00000384236 104 ntBASIC0.37□□□□□ -2.35
CCDC163A0A0D9SF12 AC069113.3-201ENST00000521019 150 ntBASIC0.37□□□□□ -2.35
CCDC163A0A0D9SF12 MIR4514-201ENST00000581410 57 ntBASIC0.37□□□□□ -2.35
CCDC163A0A0D9SF12 Y_RNA.125-201ENST00000363371 111 ntBASIC0.36□□□□□ -2.35
CCDC163A0A0D9SF12 MIR643-201ENST00000385267 97 ntBASIC0.36□□□□□ -2.35
CCDC163A0A0D9SF12 MIR501-201ENST00000390204 84 ntBASIC0.36□□□□□ -2.35
CCDC163A0A0D9SF12 snoU13.17-201ENST00000458802 104 ntBASIC0.36□□□□□ -2.35
CCDC163A0A0D9SF12 MIR516B1-201ENST00000385211 90 ntBASIC0.35□□□□□ -2.35
CCDC163A0A0D9SF12 RNU6-1177P-201ENST00000391058 104 ntBASIC0.35□□□□□ -2.35
CCDC163A0A0D9SF12 Y_RNA.407-201ENST00000383986 113 ntBASIC0.34□□□□□ -2.36
CCDC163A0A0D9SF12 Y_RNA.437-201ENST00000384113 113 ntBASIC0.34□□□□□ -2.36
CCDC163A0A0D9SF12 AL450471.1-201ENST00000447509 127 ntBASIC0.34□□□□□ -2.36
CCDC163A0A0D9SF12 AC084368.1-201ENST00000620935 65 ntBASIC0.34□□□□□ -2.36
CCDC163A0A0D9SF12 RNU6-652P-201ENST00000365488 107 ntBASIC0.33□□□□□ -2.36
CCDC163A0A0D9SF12 MIR4677-201ENST00000584153 80 ntBASIC0.33□□□□□ -2.36
CCDC163A0A0D9SF12 AC006160.2-201ENST00000637708 154 ntBASIC0.33□□□□□ -2.36
CCDC163A0A0D9SF12 RNU6-497P-201ENST00000365316 104 ntBASIC0.32□□□□□ -2.36
CCDC163A0A0D9SF12 RNU6-127P-201ENST00000390897 107 ntBASIC0.32□□□□□ -2.36
CCDC163A0A0D9SF12 AC022137.1-201ENST00000483735 151 ntBASIC0.32□□□□□ -2.36
CCDC163A0A0D9SF12 MIR548AE1-201ENST00000583292 70 ntBASIC0.32□□□□□ -2.36
CCDC163A0A0D9SF12 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
CCDC163A0A0D9SF12 RNU6-1108P-201ENST00000516308 104 ntBASIC0.31□□□□□ -2.36
CCDC163A0A0D9SF12 RNU6-208P-201ENST00000362431 107 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 RNU6-161P-201ENST00000363051 106 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 SNORD73B-201ENST00000364394 72 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 Y_RNA.371-201ENST00000365591 113 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 Y_RNA.426-201ENST00000384068 113 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 RNU6-154P-201ENST00000384306 106 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 MIR548AD-201ENST00000584780 82 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 MIR4315-1-201ENST00000636800 73 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 MIR4773-1-201ENST00000637203 78 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 MIR4315-2-201ENST00000640925 73 ntBASIC0.3□□□□□ -2.36
CCDC163A0A0D9SF12 SNORA24B-201ENST00000384176 131 ntBASIC0.29□□□□□ -2.36
CCDC163A0A0D9SF12 AC140658.3-201ENST00000567603 271 ntBASIC0.29□□□□□ -2.36
CCDC163A0A0D9SF12 MIR5588-201ENST00000581890 63 ntBASIC0.29□□□□□ -2.36
CCDC163A0A0D9SF12 RNU6-242P-201ENST00000384359 107 ntBASIC0.28□□□□□ -2.36
CCDC163A0A0D9SF12 MIR652-201ENST00000385278 98 ntBASIC0.28□□□□□ -2.36
CCDC163A0A0D9SF12 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
CCDC163A0A0D9SF12 SNORD77.2-201ENST00000391045 68 ntBASIC0.28□□□□□ -2.36
CCDC163A0A0D9SF12 AC097510.1-201ENST00000510945 133 ntBASIC0.28□□□□□ -2.36
CCDC163A0A0D9SF12 RNA5SP285-201ENST00000516619 119 ntBASIC0.28□□□□□ -2.36
CCDC163A0A0D9SF12 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
CCDC163A0A0D9SF12 SNORD42B-201ENST00000458893 67 ntBASIC0.27□□□□□ -2.37
CCDC163A0A0D9SF12 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.27□□□□□ -2.37
CCDC163A0A0D9SF12 SCARNA11.2-201ENST00000517183 154 ntBASIC0.27□□□□□ -2.37
CCDC163A0A0D9SF12 SNORD114-4-201ENST00000363962 75 ntBASIC0.26□□□□□ -2.37
CCDC163A0A0D9SF12 RNU6-820P-201ENST00000384273 107 ntBASIC0.26□□□□□ -2.37
CCDC163A0A0D9SF12 RNA5SP299-201ENST00000391203 116 ntBASIC0.26□□□□□ -2.37
CCDC163A0A0D9SF12 MIR3925-201ENST00000584674 77 ntBASIC0.26□□□□□ -2.37
CCDC163A0A0D9SF12 AC062037.1-201ENST00000605302 128 ntBASIC0.26□□□□□ -2.37
CCDC163A0A0D9SF12 RNU7-188P-201ENST00000517063 64 ntBASIC0.25□□□□□ -2.37
CCDC163A0A0D9SF12 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
CCDC163A0A0D9SF12 RNU6-495P-201ENST00000362995 107 ntBASIC0.24□□□□□ -2.37
CCDC163A0A0D9SF12 RNU6-824P-201ENST00000363724 104 ntBASIC0.24□□□□□ -2.37
CCDC163A0A0D9SF12 RNU6-382P-201ENST00000365181 106 ntBASIC0.24□□□□□ -2.37
CCDC163A0A0D9SF12 MIR610-201ENST00000385139 96 ntBASIC0.24□□□□□ -2.37
CCDC163A0A0D9SF12 Y_RNA.607-201ENST00000410597 98 ntBASIC0.24□□□□□ -2.37
CCDC163A0A0D9SF12 RNU6-979P-201ENST00000383896 107 ntBASIC0.23□□□□□ -2.37
CCDC163A0A0D9SF12 MIR593-201ENST00000384856 100 ntBASIC0.23□□□□□ -2.37
CCDC163A0A0D9SF12 RNU6-782P-201ENST00000516852 104 ntBASIC0.23□□□□□ -2.37
CCDC163A0A0D9SF12 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CCDC163A0A0D9SF12 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
CCDC163A0A0D9SF12 RNA5SP214-201ENST00000363378 118 ntBASIC0.22□□□□□ -2.37
CCDC163A0A0D9SF12 RNU6-35P-201ENST00000384530 107 ntBASIC0.22□□□□□ -2.37
CCDC163A0A0D9SF12 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
CCDC163A0A0D9SF12 Y_RNA.12-201ENST00000362393 112 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 RNU6-624P-201ENST00000363411 107 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 Y_RNA.264-201ENST00000364665 102 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 SNORD114-29-201ENST00000364819 70 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 MIR329-2-201ENST00000385029 84 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 SNORA26.2-201ENST00000390922 122 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 SNORD75.2-201ENST00000408784 58 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 RNU6-274P-201ENST00000459566 107 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 RNA5SP476-201ENST00000516613 103 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.21□□□□□ -2.38
CCDC163A0A0D9SF12 RNU6-1276P-201ENST00000365372 104 ntBASIC0.2□□□□□ -2.38
CCDC163A0A0D9SF12 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
CCDC163A0A0D9SF12 RNU6-129P-201ENST00000391022 107 ntBASIC0.2□□□□□ -2.38
CCDC163A0A0D9SF12 SNORA75.1-201ENST00000391130 148 ntBASIC0.2□□□□□ -2.38
CCDC163A0A0D9SF12 AL691482.2-201ENST00000457453 84 ntBASIC0.2□□□□□ -2.38
CCDC163A0A0D9SF12 SCARNA17.3-201ENST00000516381 125 ntBASIC0.2□□□□□ -2.38
CCDC163A0A0D9SF12 MIR4679-1-201ENST00000637619 75 ntBASIC0.19□□□□□ -2.38
CCDC163A0A0D9SF12 MIR20A-201ENST00000362279 71 ntBASIC0.18□□□□□ -2.38
CCDC163A0A0D9SF12 RNA5SP163-201ENST00000410304 99 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms