Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SNORA2A-201ENST00000383885 135 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 MIR501-201ENST00000390204 84 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.620-201ENST00000411009 88 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 SNORA18.5-201ENST00000516616 101 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.694-201ENST00000516677 117 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 RNU6-844P-201ENST00000517175 102 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 MIR4668-201ENST00000582284 70 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 MIR548O2-201ENST00000616090 70 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 AC010487.4-201ENST00000637027 61 ntBASIC0.27□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.491-201ENST00000384417 107 ntBASIC0.26□□□□□ -2.37
MRPS28Q9Y2Q9 MIR451A-201ENST00000385059 72 ntBASIC0.26□□□□□ -2.37
MRPS28Q9Y2Q9 RNA5SP193-201ENST00000410353 107 ntBASIC0.26□□□□□ -2.37
MRPS28Q9Y2Q9 AC069503.3-201ENST00000618674 145 ntBASIC0.26□□□□□ -2.37
MRPS28Q9Y2Q9 RNU6-633P-201ENST00000362612 103 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 RNA5SP128-201ENST00000365305 116 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 RNU6-675P-201ENST00000384236 104 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 RNY1P4-201ENST00000384595 115 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 MIR548U-201ENST00000390728 81 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 RNU6-267P-201ENST00000516714 103 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 AC069113.3-201ENST00000521019 150 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 MIR3140-201ENST00000583685 90 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 MIR548AD-201ENST00000584780 82 ntBASIC0.25□□□□□ -2.37
MRPS28Q9Y2Q9 RNU6-161P-201ENST00000363051 106 ntBASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 RNU4-32P-201ENST00000363404 141 ntBASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.220-201ENST00000364244 109 ntBASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 U3.27-201ENST00000391237 200 ntBASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 SNORD110-201ENST00000408189 75 ntBASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 RNU7-153P-201ENST00000516455 62 ntBASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 MIR7111-201ENST00000619751 72 ntBASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 SNORA63.2-201ENST00000362603 126 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 RNU6-1051P-201ENST00000365471 102 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 MIR548H2-201ENST00000408874 88 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.593-201ENST00000410292 98 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 RNU6-402P-201ENST00000410678 103 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 AC006210.1-201ENST00000424882 111 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 MIR5582-201ENST00000579697 68 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 MIR4677-201ENST00000584153 80 ntBASIC0.23□□□□□ -2.37
MRPS28Q9Y2Q9 SNORD116-22-201ENST00000384430 92 ntBASIC0.22□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.558-201ENST00000384685 113 ntBASIC0.22□□□□□ -2.37
MRPS28Q9Y2Q9 RNY4P30-201ENST00000410216 95 ntBASIC0.22□□□□□ -2.37
MRPS28Q9Y2Q9 MIR4460-201ENST00000577862 86 ntBASIC0.22□□□□□ -2.37
MRPS28Q9Y2Q9 MIR548AE1-201ENST00000583292 70 ntBASIC0.22□□□□□ -2.37
MRPS28Q9Y2Q9 Y_RNA.17-201ENST00000362433 111 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 Y_RNA.369-201ENST00000365568 117 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 MIR193B-201ENST00000384907 83 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-127P-201ENST00000390897 107 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 MIR1236-201ENST00000408340 102 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 YWHAEP2-201ENST00000580066 112 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 MIR4796-201ENST00000580742 81 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 MIR3925-201ENST00000584674 77 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 MIR499B-201ENST00000636498 73 ntBASIC0.21□□□□□ -2.38
MRPS28Q9Y2Q9 SNORA9.1-201ENST00000362412 131 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6V-201ENST00000384105 107 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 MIR519C-201ENST00000385053 87 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 MIR216B-201ENST00000390186 82 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-1052P-201ENST00000411398 104 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 snoU13.17-201ENST00000458802 104 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 SNORA25.13-201ENST00000516395 103 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-719P-201ENST00000516671 104 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
MRPS28Q9Y2Q9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.19□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-54P-201ENST00000365563 107 ntBASIC0.19□□□□□ -2.38
MRPS28Q9Y2Q9 SNORD42B-201ENST00000458893 67 ntBASIC0.19□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-1057P-201ENST00000517162 102 ntBASIC0.19□□□□□ -2.38
MRPS28Q9Y2Q9 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
MRPS28Q9Y2Q9 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
MRPS28Q9Y2Q9 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 SNORD114-26-201ENST00000363543 72 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 Y_RNA.437-201ENST00000384113 113 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 FGF7P7-201ENST00000514120 227 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 RNA5SP480-201ENST00000516840 109 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-782P-201ENST00000516852 104 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 RNA5SP170-201ENST00000517150 101 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 U7.6-201ENST00000610841 64 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 MIR548BB-201ENST00000626714 66 ntBASIC0.18□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-624P-201ENST00000363411 107 ntBASIC0.17□□□□□ -2.38
MRPS28Q9Y2Q9 MIR876-201ENST00000401147 81 ntBASIC0.17□□□□□ -2.38
MRPS28Q9Y2Q9 MTATP6P29-201ENST00000415057 132 ntBASIC0.17□□□□□ -2.38
MRPS28Q9Y2Q9 AC140658.3-201ENST00000567603 271 ntBASIC0.17□□□□□ -2.38
MRPS28Q9Y2Q9 MIR4473-201ENST00000583731 91 ntBASIC0.17□□□□□ -2.38
MRPS28Q9Y2Q9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-495P-201ENST00000362995 107 ntBASIC0.16□□□□□ -2.38
MRPS28Q9Y2Q9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.16□□□□□ -2.38
MRPS28Q9Y2Q9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
MRPS28Q9Y2Q9 MIR1273G-201ENST00000577677 100 ntBASIC0.16□□□□□ -2.38
MRPS28Q9Y2Q9 RNU6-294P-201ENST00000364999 102 ntBASIC0.15□□□□□ -2.39
MRPS28Q9Y2Q9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 256.3 ms