Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNORA75.2-201ENST00000391138 150 ntBASIC1.91□□□□□ -2.1
COL25A1Q9BXS0 SNORA75.3-201ENST00000391231 150 ntBASIC1.91□□□□□ -2.1
COL25A1Q9BXS0 RNU7-56P-201ENST00000458744 62 ntBASIC1.91□□□□□ -2.1
COL25A1Q9BXS0 RNU7-104P-201ENST00000459398 79 ntBASIC1.91□□□□□ -2.1
COL25A1Q9BXS0 RNU6-980P-201ENST00000516925 103 ntBASIC1.91□□□□□ -2.1
COL25A1Q9BXS0 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.91□□□□□ -2.1
COL25A1Q9BXS0 MIR8063-201ENST00000621930 81 ntBASIC1.91□□□□□ -2.1
COL25A1Q9BXS0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.9□□□□□ -2.11
COL25A1Q9BXS0 Y_RNA.250-201ENST00000364542 110 ntBASIC1.9□□□□□ -2.11
COL25A1Q9BXS0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL25A1Q9BXS0 AC018659.1-201ENST00000551083 169 ntBASIC1.9□□□□□ -2.11
COL25A1Q9BXS0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
COL25A1Q9BXS0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
COL25A1Q9BXS0 RNU6-1162P-201ENST00000384443 104 ntBASIC1.89□□□□□ -2.11
COL25A1Q9BXS0 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
COL25A1Q9BXS0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.89□□□□□ -2.11
COL25A1Q9BXS0 AL773524.1-201ENST00000614065 229 ntBASIC1.89□□□□□ -2.11
COL25A1Q9BXS0 RNU6-698P-201ENST00000363523 107 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 RNU1-42P-201ENST00000364033 160 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 RNU6-34P-201ENST00000364874 107 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 SNORD1A-201ENST00000364968 72 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 MIR548C-201ENST00000384815 97 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 MIR521-2-201ENST00000384818 87 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 SNORD113-2-201ENST00000391082 72 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 MIR548J-201ENST00000408833 112 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 RNU7-174P-201ENST00000516248 59 ntBASIC1.88□□□□□ -2.11
COL25A1Q9BXS0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 MIR517B-201ENST00000385102 67 ntBASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 RNU1-119P-201ENST00000391122 165 ntBASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 AC048334.1-201ENST00000477975 159 ntBASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 AC019176.1-201ENST00000518519 225 ntBASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 AC023827.1-201ENST00000569247 97 ntBASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 U4.4-201ENST00000620626 117 ntBASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 AC067863.3-201ENST00000624172 122 ntBASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL25A1Q9BXS0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
COL25A1Q9BXS0 MIR17-201ENST00000385012 84 ntBASIC1.86□□□□□ -2.11
COL25A1Q9BXS0 MT-TY-201ENST00000387409 66 ntBASIC1.86□□□□□ -2.11
COL25A1Q9BXS0 MIR4421-201ENST00000578133 69 ntBASIC1.86□□□□□ -2.11
COL25A1Q9BXS0 MIR4713-201ENST00000582691 75 ntBASIC1.86□□□□□ -2.11
COL25A1Q9BXS0 U2.7-201ENST00000619197 100 ntBASIC1.86□□□□□ -2.11
COL25A1Q9BXS0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
COL25A1Q9BXS0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL25A1Q9BXS0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.85□□□□□ -2.11
COL25A1Q9BXS0 RNU6-35P-201ENST00000384530 107 ntBASIC1.85□□□□□ -2.11
COL25A1Q9BXS0 AC079140.2-201ENST00000506193 142 ntBASIC1.85□□□□□ -2.11
COL25A1Q9BXS0 AL627230.5-201ENST00000619807 58 ntBASIC1.85□□□□□ -2.11
COL25A1Q9BXS0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL25A1Q9BXS0 RNU7-74P-201ENST00000459104 62 ntBASIC1.84□□□□□ -2.11
COL25A1Q9BXS0 MIR216A-201ENST00000385063 110 ntBASIC1.83□□□□□ -2.12
COL25A1Q9BXS0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.83□□□□□ -2.12
COL25A1Q9BXS0 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
COL25A1Q9BXS0 AL512310.8-201ENST00000550183 120 ntBASIC1.83□□□□□ -2.12
COL25A1Q9BXS0 SNORD53B-201ENST00000577887 78 ntBASIC1.83□□□□□ -2.12
COL25A1Q9BXS0 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
COL25A1Q9BXS0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
COL25A1Q9BXS0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL25A1Q9BXS0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 SNORD33-201ENST00000362761 85 ntBASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 RNU4-52P-201ENST00000384209 138 ntBASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 SNORD41.1-201ENST00000391000 69 ntBASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 snoU13.13-201ENST00000458842 104 ntBASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 RNU7-119P-201ENST00000459279 63 ntBASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 AC079804.2-201ENST00000490376 200 ntBASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL25A1Q9BXS0 SNORA31.2-201ENST00000516019 134 ntBASIC1.81□□□□□ -2.12
COL25A1Q9BXS0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.81□□□□□ -2.12
COL25A1Q9BXS0 RNU1-92P-201ENST00000517017 135 ntBASIC1.81□□□□□ -2.12
COL25A1Q9BXS0 MIR4460-201ENST00000577862 86 ntBASIC1.81□□□□□ -2.12
COL25A1Q9BXS0 MIR3937-201ENST00000580135 106 ntBASIC1.81□□□□□ -2.12
COL25A1Q9BXS0 AL136317.1-201ENST00000612653 226 ntBASIC1.81□□□□□ -2.12
COL25A1Q9BXS0 AL353770.2-201ENST00000620024 78 ntBASIC1.81□□□□□ -2.12
COL25A1Q9BXS0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.8□□□□□ -2.12
COL25A1Q9BXS0 SNORD114-4-201ENST00000363962 75 ntBASIC1.8□□□□□ -2.12
COL25A1Q9BXS0 AL591704.2-201ENST00000421658 181 ntBASIC1.8□□□□□ -2.12
COL25A1Q9BXS0 RNU7-21P-201ENST00000459430 62 ntBASIC1.8□□□□□ -2.12
COL25A1Q9BXS0 AC021146.9-201ENST00000512503 156 ntBASIC1.8□□□□□ -2.12
COL25A1Q9BXS0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
COL25A1Q9BXS0 SNORA41B-201ENST00000384785 128 ntBASIC1.79□□□□□ -2.12
COL25A1Q9BXS0 MIR100-201ENST00000385259 80 ntBASIC1.79□□□□□ -2.12
COL25A1Q9BXS0 RNU6-930P-201ENST00000390938 100 ntBASIC1.79□□□□□ -2.12
COL25A1Q9BXS0 RNU6-994P-201ENST00000410507 111 ntBASIC1.79□□□□□ -2.12
COL25A1Q9BXS0 HMGN2P38-201ENST00000423806 265 ntBASIC1.79□□□□□ -2.12
COL25A1Q9BXS0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL25A1Q9BXS0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
COL25A1Q9BXS0 RNU4-33P-201ENST00000364316 85 ntBASIC1.78□□□□□ -2.12
COL25A1Q9BXS0 MIR520F-201ENST00000384824 87 ntBASIC1.78□□□□□ -2.12
COL25A1Q9BXS0 Y_RNA.633-201ENST00000459107 95 ntBASIC1.78□□□□□ -2.12
COL25A1Q9BXS0 RNU6-231P-201ENST00000517122 103 ntBASIC1.78□□□□□ -2.12
COL25A1Q9BXS0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
COL25A1Q9BXS0 MIR1-1-201ENST00000362147 71 ntBASIC1.77□□□□□ -2.13
COL25A1Q9BXS0 RNA5SP62-201ENST00000363457 110 ntBASIC1.77□□□□□ -2.13
COL25A1Q9BXS0 MIR934-201ENST00000401241 83 ntBASIC1.77□□□□□ -2.13
COL25A1Q9BXS0 MIR548F3-201ENST00000408509 87 ntBASIC1.77□□□□□ -2.13
COL25A1Q9BXS0 AL354695.1-201ENST00000427935 228 ntBASIC1.77□□□□□ -2.13
COL25A1Q9BXS0 AC098934.3-201ENST00000430450 190 ntBASIC1.77□□□□□ -2.13
COL25A1Q9BXS0 MIR6078-201ENST00000611069 100 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms