Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNU6-811P-201ENST00000384069 107 ntBASIC-0.42□□□□□ -2.48
RAB40CQ96S21 MIR451A-201ENST00000385059 72 ntBASIC-0.42□□□□□ -2.48
RAB40CQ96S21 RNU6-75P-201ENST00000515944 104 ntBASIC-0.42□□□□□ -2.48
RAB40CQ96S21 MIR3613-201ENST00000579844 87 ntBASIC-0.42□□□□□ -2.48
RAB40CQ96S21 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
RAB40CQ96S21 MIR548O2-201ENST00000616090 70 ntBASIC-0.42□□□□□ -2.48
RAB40CQ96S21 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 SNORD50.2-201ENST00000365465 70 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 MIR652-201ENST00000385278 98 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 RNA5SP300-201ENST00000391197 107 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 MIR548I1-201ENST00000408810 149 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 Z95118.1-201ENST00000421372 247 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 RPS29P8-201ENST00000445109 171 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 AL513043.2-201ENST00000573941 143 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 MIR4536-1-201ENST00000583537 88 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 MIR4493-201ENST00000584016 73 ntBASIC-0.43□□□□□ -2.48
RAB40CQ96S21 MIR101-1-201ENST00000362265 75 ntBASIC-0.44□□□□□ -2.48
RAB40CQ96S21 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.44□□□□□ -2.48
RAB40CQ96S21 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.44□□□□□ -2.48
RAB40CQ96S21 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.44□□□□□ -2.48
RAB40CQ96S21 SNORD75.1-201ENST00000408373 60 ntBASIC-0.44□□□□□ -2.48
RAB40CQ96S21 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.44□□□□□ -2.48
RAB40CQ96S21 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.44□□□□□ -2.48
RAB40CQ96S21 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.45□□□□□ -2.48
RAB40CQ96S21 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.45□□□□□ -2.48
RAB40CQ96S21 RNA5SP205-201ENST00000364653 136 ntBASIC-0.45□□□□□ -2.48
RAB40CQ96S21 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.45□□□□□ -2.48
RAB40CQ96S21 AC244090.1-201ENST00000441884 93 ntBASIC-0.45□□□□□ -2.48
RAB40CQ96S21 RNU6-758P-201ENST00000516292 89 ntBASIC-0.45□□□□□ -2.48
RAB40CQ96S21 MIR3133-201ENST00000583157 78 ntBASIC-0.45□□□□□ -2.48
RAB40CQ96S21 MIR655-201ENST00000362159 97 ntBASIC-0.46□□□□□ -2.48
RAB40CQ96S21 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.46□□□□□ -2.48
RAB40CQ96S21 MIR604-201ENST00000384880 94 ntBASIC-0.46□□□□□ -2.48
RAB40CQ96S21 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.46□□□□□ -2.48
RAB40CQ96S21 AL391099.1-201ENST00000624635 187 ntBASIC-0.46□□□□□ -2.48
RAB40CQ96S21 MIR4788-201ENST00000639104 80 ntBASIC-0.46□□□□□ -2.48
RAB40CQ96S21 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 RNU4-36P-201ENST00000364294 144 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 SNORD116-14-201ENST00000383894 92 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 SNORD116-17-201ENST00000383929 92 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 SNORD116-15-201ENST00000384445 92 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 RNU6-813P-201ENST00000384691 107 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 SNORD116-19-201ENST00000384729 92 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 U3.27-201ENST00000391237 200 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 RNA5SP451-201ENST00000410588 110 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 RNU6-284P-201ENST00000411105 106 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 RNU7-85P-201ENST00000458851 63 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 AC103810.7-201ENST00000607821 91 ntBASIC-0.47□□□□□ -2.48
RAB40CQ96S21 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.48□□□□□ -2.49
RAB40CQ96S21 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.48□□□□□ -2.49
RAB40CQ96S21 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.48□□□□□ -2.49
RAB40CQ96S21 RNU6-880P-201ENST00000384526 107 ntBASIC-0.48□□□□□ -2.49
RAB40CQ96S21 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.48□□□□□ -2.49
RAB40CQ96S21 MIR6086-201ENST00000638065 55 ntBASIC-0.48□□□□□ -2.49
RAB40CQ96S21 RNU6-774P-201ENST00000363238 107 ntBASIC-0.49□□□□□ -2.49
RAB40CQ96S21 RNA5SP368-201ENST00000364298 116 ntBASIC-0.49□□□□□ -2.49
RAB40CQ96S21 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.49□□□□□ -2.49
RAB40CQ96S21 RNU6-54P-201ENST00000365563 107 ntBASIC-0.49□□□□□ -2.49
RAB40CQ96S21 RNU6-455P-201ENST00000384681 107 ntBASIC-0.49□□□□□ -2.49
RAB40CQ96S21 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.49□□□□□ -2.49
RAB40CQ96S21 RNU6-644P-201ENST00000391155 98 ntBASIC-0.49□□□□□ -2.49
RAB40CQ96S21 RNU6-762P-201ENST00000517107 102 ntBASIC-0.49□□□□□ -2.49
RAB40CQ96S21 RNU6-704P-201ENST00000364162 103 ntBASIC-0.5□□□□□ -2.49
RAB40CQ96S21 FGF7P7-201ENST00000514120 227 ntBASIC-0.5□□□□□ -2.49
RAB40CQ96S21 RNU6-412P-201ENST00000516434 106 ntBASIC-0.5□□□□□ -2.49
RAB40CQ96S21 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.51□□□□□ -2.49
RAB40CQ96S21 SNORD116-21-201ENST00000384507 92 ntBASIC-0.51□□□□□ -2.49
RAB40CQ96S21 AL590491.3-201ENST00000610731 82 ntBASIC-0.51□□□□□ -2.49
RAB40CQ96S21 SNORD114-4-201ENST00000363962 75 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 RNU6-746P-201ENST00000384112 109 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 MIR224-201ENST00000384889 81 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 MIR548U-201ENST00000390728 81 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 RNU4-63P-201ENST00000411313 118 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 RNU6-719P-201ENST00000516671 104 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 AP000676.1-201ENST00000533307 52 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 AC108676.2-201ENST00000605225 163 ntBASIC-0.52□□□□□ -2.49
RAB40CQ96S21 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.53□□□□□ -2.49
RAB40CQ96S21 RNU6-132P-201ENST00000383863 107 ntBASIC-0.53□□□□□ -2.49
RAB40CQ96S21 MT-TQ-201ENST00000387372 72 ntBASIC-0.53□□□□□ -2.49
RAB40CQ96S21 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
RAB40CQ96S21 RNU6-795P-201ENST00000516323 103 ntBASIC-0.53□□□□□ -2.49
RAB40CQ96S21 MIR4777-201ENST00000583710 86 ntBASIC-0.53□□□□□ -2.49
RAB40CQ96S21 SNORD114-11-201ENST00000363738 75 ntBASIC-0.54□□□□□ -2.5
RAB40CQ96S21 MIR548Z-201ENST00000584743 97 ntBASIC-0.54□□□□□ -2.5
RAB40CQ96S21 AC012531.4-201ENST00000616509 177 ntBASIC-0.54□□□□□ -2.5
RAB40CQ96S21 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.55□□□□□ -2.5
RAB40CQ96S21 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.55□□□□□ -2.5
RAB40CQ96S21 RNU6-519P-201ENST00000410590 108 ntBASIC-0.55□□□□□ -2.5
RAB40CQ96S21 RNA5SP25-201ENST00000410815 110 ntBASIC-0.55□□□□□ -2.5
RAB40CQ96S21 SNORD4B-201ENST00000459083 72 ntBASIC-0.55□□□□□ -2.5
RAB40CQ96S21 SNORD2-201ENST00000459163 69 ntBASIC-0.55□□□□□ -2.5
RAB40CQ96S21 MIR3064-201ENST00000581130 66 ntBASIC-0.55□□□□□ -2.5
RAB40CQ96S21 SNORD115-25-201ENST00000362619 82 ntBASIC-0.56□□□□□ -2.5
RAB40CQ96S21 MIR9-2-201ENST00000384838 87 ntBASIC-0.56□□□□□ -2.5
RAB40CQ96S21 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
RAB40CQ96S21 RNA5SP66-201ENST00000517178 101 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms