Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 RNU6-219P-201ENST00000364728 107 ntBASIC0.67□□□□□ -2.3
DDX53Q86TM3 Y_RNA.491-201ENST00000384417 107 ntBASIC0.67□□□□□ -2.3
DDX53Q86TM3 MIR519E-201ENST00000385075 84 ntBASIC0.67□□□□□ -2.3
DDX53Q86TM3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
DDX53Q86TM3 AC069271.1-201ENST00000445577 156 ntBASIC0.67□□□□□ -2.3
DDX53Q86TM3 RNU7-74P-201ENST00000459104 62 ntBASIC0.67□□□□□ -2.3
DDX53Q86TM3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.67□□□□□ -2.3
DDX53Q86TM3 Y_RNA.593-201ENST00000410292 98 ntBASIC0.66□□□□□ -2.3
DDX53Q86TM3 RN7SKP12-201ENST00000516275 143 ntBASIC0.66□□□□□ -2.3
DDX53Q86TM3 SNORA18.5-201ENST00000516616 101 ntBASIC0.66□□□□□ -2.3
DDX53Q86TM3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.3
DDX53Q86TM3 RNU6-633P-201ENST00000362612 103 ntBASIC0.65□□□□□ -2.31
DDX53Q86TM3 RNU6-35P-201ENST00000384530 107 ntBASIC0.65□□□□□ -2.31
DDX53Q86TM3 MIR1236-201ENST00000408340 102 ntBASIC0.65□□□□□ -2.31
DDX53Q86TM3 MIR4752-201ENST00000579672 72 ntBASIC0.65□□□□□ -2.31
DDX53Q86TM3 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
DDX53Q86TM3 MIR519C-201ENST00000385053 87 ntBASIC0.64□□□□□ -2.31
DDX53Q86TM3 MIR451A-201ENST00000385059 72 ntBASIC0.64□□□□□ -2.31
DDX53Q86TM3 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
DDX53Q86TM3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.64□□□□□ -2.31
DDX53Q86TM3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
DDX53Q86TM3 RNU6-509P-201ENST00000363519 107 ntBASIC0.63□□□□□ -2.31
DDX53Q86TM3 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
DDX53Q86TM3 Y_RNA.558-201ENST00000384685 113 ntBASIC0.63□□□□□ -2.31
DDX53Q86TM3 RNU7-153P-201ENST00000516455 62 ntBASIC0.63□□□□□ -2.31
DDX53Q86TM3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
DDX53Q86TM3 RNU6-675P-201ENST00000384236 104 ntBASIC0.62□□□□□ -2.31
DDX53Q86TM3 RNU2-59P-201ENST00000410482 191 ntBASIC0.62□□□□□ -2.31
DDX53Q86TM3 RNA5SP484-201ENST00000458857 111 ntBASIC0.62□□□□□ -2.31
DDX53Q86TM3 SNORA68.3-201ENST00000515906 83 ntBASIC0.62□□□□□ -2.31
DDX53Q86TM3 FGF7P7-201ENST00000514120 227 ntBASIC0.61□□□□□ -2.31
DDX53Q86TM3 MIR4796-201ENST00000580742 81 ntBASIC0.61□□□□□ -2.31
DDX53Q86TM3 AC006254.2-201ENST00000603259 279 ntBASIC0.61□□□□□ -2.31
DDX53Q86TM3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
DDX53Q86TM3 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.6□□□□□ -2.31
DDX53Q86TM3 NAMPTP3-201ENST00000569273 224 ntBASIC0.6□□□□□ -2.31
DDX53Q86TM3 IGLL4P-201ENST00000614590 133 ntBASIC0.6□□□□□ -2.31
DDX53Q86TM3 MIR2909-201ENST00000617113 69 ntBASIC0.6□□□□□ -2.31
DDX53Q86TM3 AC073869.9-201ENST00000641610 120 ntBASIC0.6□□□□□ -2.31
DDX53Q86TM3 RNY1P1-201ENST00000364372 112 ntBASIC0.59□□□□□ -2.31
DDX53Q86TM3 RNU1-141P-201ENST00000364623 158 ntBASIC0.59□□□□□ -2.31
DDX53Q86TM3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.59□□□□□ -2.31
DDX53Q86TM3 RNU6-1052P-201ENST00000411398 104 ntBASIC0.59□□□□□ -2.31
DDX53Q86TM3 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
DDX53Q86TM3 RNU6-719P-201ENST00000516671 104 ntBASIC0.59□□□□□ -2.31
DDX53Q86TM3 SNORA70.25-201ENST00000612741 95 ntBASIC0.59□□□□□ -2.31
DDX53Q86TM3 SNORD44.1-201ENST00000363202 61 ntBASIC0.58□□□□□ -2.32
DDX53Q86TM3 SNORD90-201ENST00000391145 111 ntBASIC0.58□□□□□ -2.32
DDX53Q86TM3 Y_RNA.611-201ENST00000410682 108 ntBASIC0.58□□□□□ -2.32
DDX53Q86TM3 AC093423.1-201ENST00000440817 142 ntBASIC0.58□□□□□ -2.32
DDX53Q86TM3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
DDX53Q86TM3 MIR548BB-201ENST00000626714 66 ntBASIC0.58□□□□□ -2.32
DDX53Q86TM3 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
DDX53Q86TM3 SNORD115-37-201ENST00000363768 82 ntBASIC0.57□□□□□ -2.32
DDX53Q86TM3 RNU6-497P-201ENST00000365316 104 ntBASIC0.57□□□□□ -2.32
DDX53Q86TM3 RNU6-1051P-201ENST00000365471 102 ntBASIC0.57□□□□□ -2.32
DDX53Q86TM3 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
DDX53Q86TM3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
DDX53Q86TM3 MIR3140-201ENST00000583685 90 ntBASIC0.57□□□□□ -2.32
DDX53Q86TM3 RNU1-29P-201ENST00000606574 126 ntBASIC0.57□□□□□ -2.32
DDX53Q86TM3 MIR494-201ENST00000349529 81 ntBASIC0.56□□□□□ -2.32
DDX53Q86TM3 Y_RNA.73-201ENST00000362910 113 ntBASIC0.56□□□□□ -2.32
DDX53Q86TM3 MIR450A2-201ENST00000385022 100 ntBASIC0.56□□□□□ -2.32
DDX53Q86TM3 AC006210.1-201ENST00000424882 111 ntBASIC0.56□□□□□ -2.32
DDX53Q86TM3 RNU6-762P-201ENST00000517107 102 ntBASIC0.56□□□□□ -2.32
DDX53Q86TM3 MIR4460-201ENST00000577862 86 ntBASIC0.56□□□□□ -2.32
DDX53Q86TM3 MIR6755-201ENST00000619993 66 ntBASIC0.56□□□□□ -2.32
DDX53Q86TM3 MIR6086-201ENST00000638065 55 ntBASIC0.56□□□□□ -2.32
DDX53Q86TM3 MIRLET7D-201ENST00000362263 87 ntBASIC0.55□□□□□ -2.32
DDX53Q86TM3 SNORA63.2-201ENST00000362603 126 ntBASIC0.55□□□□□ -2.32
DDX53Q86TM3 MIR216B-201ENST00000390186 82 ntBASIC0.55□□□□□ -2.32
DDX53Q86TM3 AC093729.1-201ENST00000513074 128 ntBASIC0.55□□□□□ -2.32
DDX53Q86TM3 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
DDX53Q86TM3 MIR103A1-201ENST00000362165 78 ntBASIC0.54□□□□□ -2.32
DDX53Q86TM3 U3.27-201ENST00000391237 200 ntBASIC0.54□□□□□ -2.32
DDX53Q86TM3 SNORD110-201ENST00000408189 75 ntBASIC0.54□□□□□ -2.32
DDX53Q86TM3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.54□□□□□ -2.32
DDX53Q86TM3 SNORA2A-201ENST00000383885 135 ntBASIC0.53□□□□□ -2.32
DDX53Q86TM3 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
DDX53Q86TM3 SNORA25.13-201ENST00000516395 103 ntBASIC0.53□□□□□ -2.32
DDX53Q86TM3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
DDX53Q86TM3 SNORD73B-201ENST00000364394 72 ntBASIC0.52□□□□□ -2.33
DDX53Q86TM3 RNY4P3-201ENST00000365254 95 ntBASIC0.52□□□□□ -2.33
DDX53Q86TM3 MT-TY-201ENST00000387409 66 ntBASIC0.52□□□□□ -2.33
DDX53Q86TM3 RNU6-863P-201ENST00000515989 104 ntBASIC0.52□□□□□ -2.33
DDX53Q86TM3 RNA5SP285-201ENST00000516619 119 ntBASIC0.52□□□□□ -2.33
DDX53Q86TM3 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
DDX53Q86TM3 SNORA62.5-201ENST00000516634 120 ntBASIC0.51□□□□□ -2.33
DDX53Q86TM3 MIR548O2-201ENST00000616090 70 ntBASIC0.51□□□□□ -2.33
DDX53Q86TM3 AC069503.3-201ENST00000618674 145 ntBASIC0.51□□□□□ -2.33
DDX53Q86TM3 MIR760-201ENST00000390220 80 ntBASIC0.5□□□□□ -2.33
DDX53Q86TM3 AC022137.1-201ENST00000483735 151 ntBASIC0.5□□□□□ -2.33
DDX53Q86TM3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.5□□□□□ -2.33
DDX53Q86TM3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.5□□□□□ -2.33
DDX53Q86TM3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.5□□□□□ -2.33
DDX53Q86TM3 MIR5706-201ENST00000579841 80 ntBASIC0.5□□□□□ -2.33
DDX53Q86TM3 YWHAEP2-201ENST00000580066 112 ntBASIC0.5□□□□□ -2.33
DDX53Q86TM3 AC062037.1-201ENST00000605302 128 ntBASIC0.5□□□□□ -2.33
DDX53Q86TM3 RNU5F-1-201ENST00000362507 117 ntBASIC0.49□□□□□ -2.33
DDX53Q86TM3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms