Protein–RNA interactions for Protein: Q6ZSA7

LRRC55, Leucine-rich repeat-containing protein 55, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55Q6ZSA7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1□□□□□ -2.25
LRRC55Q6ZSA7 MIR2113-201ENST00000459007 91 ntBASIC1□□□□□ -2.25
LRRC55Q6ZSA7 RNU6-469P-201ENST00000516253 101 ntBASIC1□□□□□ -2.25
LRRC55Q6ZSA7 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
LRRC55Q6ZSA7 U7.4-201ENST00000614961 63 ntBASIC1□□□□□ -2.25
LRRC55Q6ZSA7 RNU6-1126P-201ENST00000384002 107 ntBASIC0.99□□□□□ -2.25
LRRC55Q6ZSA7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
LRRC55Q6ZSA7 RNU6-1057P-201ENST00000517162 102 ntBASIC0.99□□□□□ -2.25
LRRC55Q6ZSA7 SNORA24B-201ENST00000384176 131 ntBASIC0.98□□□□□ -2.25
LRRC55Q6ZSA7 Y_RNA.565-201ENST00000384719 101 ntBASIC0.98□□□□□ -2.25
LRRC55Q6ZSA7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
LRRC55Q6ZSA7 MIR3612-201ENST00000579753 87 ntBASIC0.98□□□□□ -2.25
LRRC55Q6ZSA7 MIR3920-201ENST00000581751 86 ntBASIC0.98□□□□□ -2.25
LRRC55Q6ZSA7 SNORD18A-201ENST00000363753 72 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 Y_RNA.371-201ENST00000365591 113 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 RNU6-807P-201ENST00000516805 107 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 RNU6-303P-201ENST00000517091 106 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 MIR3134-201ENST00000579433 74 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 MIR4639-201ENST00000584938 69 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 AC244669.1-204ENST00000621564 178 ntBASIC0.97□□□□□ -2.25
LRRC55Q6ZSA7 SNORD114-26-201ENST00000363543 72 ntBASIC0.96□□□□□ -2.26
LRRC55Q6ZSA7 SNORD28-201ENST00000384706 75 ntBASIC0.96□□□□□ -2.26
LRRC55Q6ZSA7 AC067863.3-201ENST00000624172 122 ntBASIC0.96□□□□□ -2.26
LRRC55Q6ZSA7 RNU6-824P-201ENST00000363724 104 ntBASIC0.95□□□□□ -2.26
LRRC55Q6ZSA7 Y_RNA.545-201ENST00000384652 105 ntBASIC0.95□□□□□ -2.26
LRRC55Q6ZSA7 YWHAEP2-201ENST00000580066 112 ntBASIC0.95□□□□□ -2.26
LRRC55Q6ZSA7 YWHAEP3-201ENST00000582767 121 ntBASIC0.95□□□□□ -2.26
LRRC55Q6ZSA7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.95□□□□□ -2.26
LRRC55Q6ZSA7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 MIR548L-201ENST00000408303 86 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 SNORD99-201ENST00000408612 74 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 AC074348.1-201ENST00000426503 132 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 AC011195.1-201ENST00000578177 177 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 MIR3678-201ENST00000578455 94 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 MIR664A-201ENST00000626086 82 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 MIR1297-201ENST00000637311 77 ntBASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LRRC55Q6ZSA7 RNU6-340P-201ENST00000364005 107 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 RNU4-45P-201ENST00000365469 141 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 RNU6-716P-201ENST00000365621 103 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 SNORA8.1-201ENST00000384250 140 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 RNU6-154P-201ENST00000384306 106 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 MIR617-201ENST00000385030 97 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 MIR519E-201ENST00000385075 84 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 RNA5SP47-201ENST00000517230 109 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 U6.81-201ENST00000612550 106 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.93□□□□□ -2.26
LRRC55Q6ZSA7 RNU6-330P-201ENST00000363015 107 ntBASIC0.92□□□□□ -2.26
LRRC55Q6ZSA7 RNU6-1177P-201ENST00000391058 104 ntBASIC0.92□□□□□ -2.26
LRRC55Q6ZSA7 AC244098.3-201ENST00000424803 96 ntBASIC0.92□□□□□ -2.26
LRRC55Q6ZSA7 AC097510.1-201ENST00000510945 133 ntBASIC0.92□□□□□ -2.26
LRRC55Q6ZSA7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.92□□□□□ -2.26
LRRC55Q6ZSA7 MIR6779-201ENST00000617283 64 ntBASIC0.92□□□□□ -2.26
LRRC55Q6ZSA7 U3.27-201ENST00000391237 200 ntBASIC0.91□□□□□ -2.26
LRRC55Q6ZSA7 RNU2-59P-201ENST00000410482 191 ntBASIC0.91□□□□□ -2.26
LRRC55Q6ZSA7 AC073261.1-201ENST00000429409 121 ntBASIC0.91□□□□□ -2.26
LRRC55Q6ZSA7 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
LRRC55Q6ZSA7 RNU6-523P-201ENST00000516304 54 ntBASIC0.91□□□□□ -2.26
LRRC55Q6ZSA7 MIR4714-201ENST00000580728 77 ntBASIC0.91□□□□□ -2.26
LRRC55Q6ZSA7 MIR18A-201ENST00000362310 71 ntBASIC0.9□□□□□ -2.27
LRRC55Q6ZSA7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.9□□□□□ -2.27
LRRC55Q6ZSA7 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
LRRC55Q6ZSA7 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.27
LRRC55Q6ZSA7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-70P-201ENST00000516438 60 ntBASIC0.9□□□□□ -2.27
LRRC55Q6ZSA7 MIR4773-1-201ENST00000637203 78 ntBASIC0.9□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-726P-201ENST00000364680 107 ntBASIC0.89□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-382P-201ENST00000365181 106 ntBASIC0.89□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-411P-201ENST00000384451 107 ntBASIC0.89□□□□□ -2.27
LRRC55Q6ZSA7 Y_RNA.606-201ENST00000410579 103 ntBASIC0.89□□□□□ -2.27
LRRC55Q6ZSA7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.89□□□□□ -2.27
LRRC55Q6ZSA7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.89□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-1015P-201ENST00000517121 99 ntBASIC0.89□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-54P-201ENST00000365563 107 ntBASIC0.88□□□□□ -2.27
LRRC55Q6ZSA7 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-681P-201ENST00000364012 104 ntBASIC0.87□□□□□ -2.27
LRRC55Q6ZSA7 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
LRRC55Q6ZSA7 RNA5SP222-201ENST00000411039 105 ntBASIC0.87□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-274P-201ENST00000459566 107 ntBASIC0.87□□□□□ -2.27
LRRC55Q6ZSA7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
LRRC55Q6ZSA7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
LRRC55Q6ZSA7 MIR548O2-201ENST00000616090 70 ntBASIC0.87□□□□□ -2.27
LRRC55Q6ZSA7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.87□□□□□ -2.27
LRRC55Q6ZSA7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
LRRC55Q6ZSA7 MIR216B-201ENST00000390186 82 ntBASIC0.86□□□□□ -2.27
LRRC55Q6ZSA7 RNU7-74P-201ENST00000459104 62 ntBASIC0.86□□□□□ -2.27
LRRC55Q6ZSA7 SNORA36.1-201ENST00000363424 132 ntBASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 RNU6V-201ENST00000384105 107 ntBASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-1241P-201ENST00000384536 107 ntBASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 RNU6-269P-201ENST00000391077 97 ntBASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 SNORD75.2-201ENST00000408784 58 ntBASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 RNA5SP227-201ENST00000516184 113 ntBASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 NAMPTP3-201ENST00000569273 224 ntBASIC0.85□□□□□ -2.27
LRRC55Q6ZSA7 RNA5SP325-201ENST00000363756 130 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms