Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-469P-201ENST00000516253 101 ntBASIC0.71□□□□□ -2.3
ZNF549Q6P9A3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.71□□□□□ -2.3
ZNF549Q6P9A3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.71□□□□□ -2.3
ZNF549Q6P9A3 AC067863.3-201ENST00000624172 122 ntBASIC0.71□□□□□ -2.3
ZNF549Q6P9A3 RNY1P8-201ENST00000383970 114 ntBASIC0.7□□□□□ -2.3
ZNF549Q6P9A3 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
ZNF549Q6P9A3 MIR617-201ENST00000385030 97 ntBASIC0.7□□□□□ -2.3
ZNF549Q6P9A3 AC093423.1-201ENST00000440817 142 ntBASIC0.7□□□□□ -2.3
ZNF549Q6P9A3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.7□□□□□ -2.3
ZNF549Q6P9A3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ZNF549Q6P9A3 RNU6-1052P-201ENST00000411398 104 ntBASIC0.69□□□□□ -2.3
ZNF549Q6P9A3 RNU6-719P-201ENST00000516671 104 ntBASIC0.69□□□□□ -2.3
ZNF549Q6P9A3 RNA5SP94-201ENST00000516917 108 ntBASIC0.69□□□□□ -2.3
ZNF549Q6P9A3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 RNU6-686P-201ENST00000364839 107 ntBASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 RNU4-45P-201ENST00000365469 141 ntBASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 RNU6-24P-201ENST00000384440 107 ntBASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 SNORD77.2-201ENST00000391045 68 ntBASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 U3.27-201ENST00000391237 200 ntBASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 Y_RNA.660-201ENST00000516002 120 ntBASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
ZNF549Q6P9A3 RNU6-208P-201ENST00000362431 107 ntBASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 Y_RNA.244-201ENST00000364484 109 ntBASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 RNU6-716P-201ENST00000365621 103 ntBASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 AC022709.1-201ENST00000615967 87 ntBASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 AL162376.1-201ENST00000624117 175 ntBASIC0.67□□□□□ -2.3
ZNF549Q6P9A3 RNU6-824P-201ENST00000363724 104 ntBASIC0.66□□□□□ -2.3
ZNF549Q6P9A3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.66□□□□□ -2.3
ZNF549Q6P9A3 RNU6-269P-201ENST00000391077 97 ntBASIC0.66□□□□□ -2.3
ZNF549Q6P9A3 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
ZNF549Q6P9A3 MIR7107-201ENST00000611489 80 ntBASIC0.66□□□□□ -2.3
ZNF549Q6P9A3 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
ZNF549Q6P9A3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.31
ZNF549Q6P9A3 RNU5F-1-201ENST00000362507 117 ntBASIC0.65□□□□□ -2.31
ZNF549Q6P9A3 RNY4P3-201ENST00000365254 95 ntBASIC0.65□□□□□ -2.31
ZNF549Q6P9A3 RNA5SP268-201ENST00000516828 124 ntBASIC0.65□□□□□ -2.31
ZNF549Q6P9A3 MIR548O2-201ENST00000616090 70 ntBASIC0.65□□□□□ -2.31
ZNF549Q6P9A3 Y_RNA.788-201ENST00000622394 112 ntBASIC0.65□□□□□ -2.31
ZNF549Q6P9A3 Y_RNA.264-201ENST00000364665 102 ntBASIC0.64□□□□□ -2.31
ZNF549Q6P9A3 AC074348.1-201ENST00000426503 132 ntBASIC0.64□□□□□ -2.31
ZNF549Q6P9A3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.64□□□□□ -2.31
ZNF549Q6P9A3 U6.81-201ENST00000612550 106 ntBASIC0.64□□□□□ -2.31
ZNF549Q6P9A3 MIR6515-201ENST00000619843 57 ntBASIC0.64□□□□□ -2.31
ZNF549Q6P9A3 RNA5SP517-201ENST00000364724 117 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 SNORA8.2-201ENST00000384372 139 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 MIR489-201ENST00000384923 84 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 RNU2-59P-201ENST00000410482 191 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 Y_RNA.606-201ENST00000410579 103 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 SCARNA18B-201ENST00000458806 135 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 AC097510.1-201ENST00000510945 133 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 YWHAEP2-201ENST00000580066 112 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 YWHAEP3-201ENST00000582767 121 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 RNU1-29P-201ENST00000606574 126 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 MIR7111-201ENST00000619751 72 ntBASIC0.63□□□□□ -2.31
ZNF549Q6P9A3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 RNU6-340P-201ENST00000364005 107 ntBASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 RNU1-141P-201ENST00000364623 158 ntBASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 RNA5SP227-201ENST00000516184 113 ntBASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
ZNF549Q6P9A3 RNU6-1094P-201ENST00000362416 104 ntBASIC0.61□□□□□ -2.31
ZNF549Q6P9A3 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
ZNF549Q6P9A3 MT-TY-201ENST00000387409 66 ntBASIC0.61□□□□□ -2.31
ZNF549Q6P9A3 MIR548L-201ENST00000408303 86 ntBASIC0.61□□□□□ -2.31
ZNF549Q6P9A3 RNA5SP484-201ENST00000458857 111 ntBASIC0.61□□□□□ -2.31
ZNF549Q6P9A3 RNU7-74P-201ENST00000459104 62 ntBASIC0.61□□□□□ -2.31
ZNF549Q6P9A3 RNU6-303P-201ENST00000517091 106 ntBASIC0.61□□□□□ -2.31
ZNF549Q6P9A3 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
ZNF549Q6P9A3 RNU6-495P-201ENST00000362995 107 ntBASIC0.6□□□□□ -2.31
ZNF549Q6P9A3 RNU6-54P-201ENST00000365563 107 ntBASIC0.6□□□□□ -2.31
ZNF549Q6P9A3 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
ZNF549Q6P9A3 MIR216B-201ENST00000390186 82 ntBASIC0.6□□□□□ -2.31
ZNF549Q6P9A3 SNORD118-201ENST00000363593 134 ntBASIC0.59□□□□□ -2.31
ZNF549Q6P9A3 RNU6-382P-201ENST00000365181 106 ntBASIC0.59□□□□□ -2.31
ZNF549Q6P9A3 Y_RNA.371-201ENST00000365591 113 ntBASIC0.59□□□□□ -2.31
ZNF549Q6P9A3 SNORD42B-201ENST00000458893 67 ntBASIC0.59□□□□□ -2.31
ZNF549Q6P9A3 AC145423.2-201ENST00000610631 239 ntBASIC0.59□□□□□ -2.31
ZNF549Q6P9A3 RNU6-330P-201ENST00000363015 107 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 RNU6V-201ENST00000384105 107 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 RNU6-154P-201ENST00000384306 106 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 RNU7-24P-201ENST00000458867 62 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 RNU6-523P-201ENST00000516304 54 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 MIR4752-201ENST00000579672 72 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 MIR4484-201ENST00000582855 83 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
ZNF549Q6P9A3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 289.3 ms