Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MIR593-201ENST00000384856 100 ntBASIC0.08□□□□□ -2.4
LYSMD4Q5XG99 RNY4P18-201ENST00000391107 89 ntBASIC0.08□□□□□ -2.4
LYSMD4Q5XG99 RNU7-74P-201ENST00000459104 62 ntBASIC0.08□□□□□ -2.4
LYSMD4Q5XG99 YWHAEP2-201ENST00000580066 112 ntBASIC0.08□□□□□ -2.4
LYSMD4Q5XG99 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
LYSMD4Q5XG99 Y_RNA.125-201ENST00000363371 111 ntBASIC0.07□□□□□ -2.4
LYSMD4Q5XG99 RNU6-756P-201ENST00000383997 107 ntBASIC0.07□□□□□ -2.4
LYSMD4Q5XG99 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.07□□□□□ -2.4
LYSMD4Q5XG99 RNU7-61P-201ENST00000515897 61 ntBASIC0.07□□□□□ -2.4
LYSMD4Q5XG99 MIR4536-1-201ENST00000583537 88 ntBASIC0.07□□□□□ -2.4
LYSMD4Q5XG99 MIR450A1-201ENST00000362262 91 ntBASIC0.06□□□□□ -2.4
LYSMD4Q5XG99 Y_RNA.273-201ENST00000364703 102 ntBASIC0.06□□□□□ -2.4
LYSMD4Q5XG99 RNU6-132P-201ENST00000383863 107 ntBASIC0.06□□□□□ -2.4
LYSMD4Q5XG99 RNU6-162P-201ENST00000516228 103 ntBASIC0.06□□□□□ -2.4
LYSMD4Q5XG99 MIR4460-201ENST00000577862 86 ntBASIC0.06□□□□□ -2.4
LYSMD4Q5XG99 MIR548AE1-201ENST00000583292 70 ntBASIC0.06□□□□□ -2.4
LYSMD4Q5XG99 RNU6-65P-201ENST00000516332 98 ntBASIC0.05□□□□□ -2.4
LYSMD4Q5XG99 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.05□□□□□ -2.4
LYSMD4Q5XG99 SNORD20-201ENST00000384550 80 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 MIR145-201ENST00000384967 88 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 MIR516B1-201ENST00000385211 90 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 RNU6-1052P-201ENST00000411398 104 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 SNORD4B-201ENST00000459083 72 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 RNU6-719P-201ENST00000516671 104 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 RNU6-782P-201ENST00000516852 104 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 SCARNA11.2-201ENST00000517183 154 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 MIR6086-201ENST00000638065 55 ntBASIC0.04□□□□□ -2.4
LYSMD4Q5XG99 SNORA63.4-201ENST00000362763 126 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 SNORD58A-201ENST00000383875 65 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 MIR106A-201ENST00000384870 81 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 MT-TY-201ENST00000387409 66 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 HAR1A.1-201ENST00000459583 118 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 SNORA25.13-201ENST00000516395 103 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 Y_RNA.705-201ENST00000516862 110 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 U7.6-201ENST00000610841 64 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 AC069503.3-201ENST00000618674 145 ntBASIC0.03□□□□□ -2.4
LYSMD4Q5XG99 Y_RNA.239-201ENST00000364444 113 ntBASIC0.02□□□□□ -2.41
LYSMD4Q5XG99 MIR451A-201ENST00000385059 72 ntBASIC0.02□□□□□ -2.41
LYSMD4Q5XG99 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
LYSMD4Q5XG99 RNU6-935P-201ENST00000410371 100 ntBASIC0.02□□□□□ -2.41
LYSMD4Q5XG99 RNU6-887P-201ENST00000410660 100 ntBASIC0.02□□□□□ -2.41
LYSMD4Q5XG99 Y_RNA.629-201ENST00000411368 105 ntBASIC0.02□□□□□ -2.41
LYSMD4Q5XG99 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.02□□□□□ -2.41
LYSMD4Q5XG99 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.02□□□□□ -2.41
LYSMD4Q5XG99 RNU6-766P-201ENST00000362478 107 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU6-161P-201ENST00000363051 106 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 Y_RNA.107-201ENST00000363190 121 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 Y_RNA.190-201ENST00000363964 101 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU6-652P-201ENST00000365488 107 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU6V-201ENST00000384105 107 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU6-1081P-201ENST00000384537 107 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 RNA5SP163-201ENST00000410304 99 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU6-1057P-201ENST00000517162 102 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 AC026421.1-201ENST00000519101 163 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 AC084368.1-201ENST00000620935 65 ntBASIC0.01□□□□□ -2.41
LYSMD4Q5XG99 RNA5SP292-201ENST00000390974 118 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 SNORD90-201ENST00000391145 111 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 RNU6-972P-201ENST00000391208 107 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 RNU6-519P-201ENST00000410590 108 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 FGF7P7-201ENST00000514120 227 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 MIR3064-201ENST00000581130 66 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 MIR4636-201ENST00000582271 80 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 RN7SL660P-201ENST00000614852 299 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 U7.3-201ENST00000616123 62 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 DLEU2_3.1-201ENST00000620005 73 ntBASIC0□□□□□ -2.41
LYSMD4Q5XG99 RNU6-215P-201ENST00000365169 102 ntBASIC-0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
LYSMD4Q5XG99 AL031737.1-201ENST00000450125 223 ntBASIC-0.01□□□□□ -2.41
LYSMD4Q5XG99 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU7-188P-201ENST00000517063 64 ntBASIC-0.01□□□□□ -2.41
LYSMD4Q5XG99 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
LYSMD4Q5XG99 MIR3140-201ENST00000583685 90 ntBASIC-0.01□□□□□ -2.41
LYSMD4Q5XG99 RNU6-54P-201ENST00000365563 107 ntBASIC-0.02□□□□□ -2.41
LYSMD4Q5XG99 RNU6-762P-201ENST00000517107 102 ntBASIC-0.02□□□□□ -2.41
LYSMD4Q5XG99 MIR5589-201ENST00000579442 60 ntBASIC-0.02□□□□□ -2.41
LYSMD4Q5XG99 MIR548O2-201ENST00000616090 70 ntBASIC-0.02□□□□□ -2.41
LYSMD4Q5XG99 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.02□□□□□ -2.41
LYSMD4Q5XG99 uc_338.10-201ENST00000621872 182 ntBASIC-0.02□□□□□ -2.41
LYSMD4Q5XG99 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.03□□□□□ -2.41
LYSMD4Q5XG99 RNU4-32P-201ENST00000363404 141 ntBASIC-0.03□□□□□ -2.41
LYSMD4Q5XG99 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.03□□□□□ -2.41
LYSMD4Q5XG99 RNU6-302P-201ENST00000365249 107 ntBASIC-0.03□□□□□ -2.41
LYSMD4Q5XG99 RNU6-44P-201ENST00000384045 107 ntBASIC-0.03□□□□□ -2.41
LYSMD4Q5XG99 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.03□□□□□ -2.41
LYSMD4Q5XG99 AC104996.3-201ENST00000590718 94 ntBASIC-0.03□□□□□ -2.41
LYSMD4Q5XG99 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.04□□□□□ -2.42
LYSMD4Q5XG99 RNU6-154P-201ENST00000384306 106 ntBASIC-0.04□□□□□ -2.42
LYSMD4Q5XG99 MTATP8P2-201ENST00000435212 202 ntBASIC-0.04□□□□□ -2.42
LYSMD4Q5XG99 MIR4802-201ENST00000581881 80 ntBASIC-0.04□□□□□ -2.42
LYSMD4Q5XG99 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
LYSMD4Q5XG99 MIR6514-201ENST00000622549 70 ntBASIC-0.04□□□□□ -2.42
LYSMD4Q5XG99 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.05□□□□□ -2.42
LYSMD4Q5XG99 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.05□□□□□ -2.42
LYSMD4Q5XG99 RNU6-811P-201ENST00000384069 107 ntBASIC-0.05□□□□□ -2.42
LYSMD4Q5XG99 MIR652-201ENST00000385278 98 ntBASIC-0.05□□□□□ -2.42
LYSMD4Q5XG99 MIR876-201ENST00000401147 81 ntBASIC-0.05□□□□□ -2.42
LYSMD4Q5XG99 MIR892B-201ENST00000401279 77 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 242.5 ms