Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 RNU1-141P-201ENST00000364623 158 ntBASIC0.71□□□□□ -2.3
ZNF394Q53GI3 Y_RNA.611-201ENST00000410682 108 ntBASIC0.71□□□□□ -2.3
ZNF394Q53GI3 RNA5SP480-201ENST00000516840 109 ntBASIC0.71□□□□□ -2.3
ZNF394Q53GI3 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
ZNF394Q53GI3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
ZNF394Q53GI3 RNU5F-1-201ENST00000362507 117 ntBASIC0.7□□□□□ -2.3
ZNF394Q53GI3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.7□□□□□ -2.3
ZNF394Q53GI3 RNU6-1051P-201ENST00000365471 102 ntBASIC0.7□□□□□ -2.3
ZNF394Q53GI3 Y_RNA.426-201ENST00000384068 113 ntBASIC0.7□□□□□ -2.3
ZNF394Q53GI3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
ZNF394Q53GI3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
ZNF394Q53GI3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.69□□□□□ -2.3
ZNF394Q53GI3 AC069271.1-201ENST00000445577 156 ntBASIC0.68□□□□□ -2.3
ZNF394Q53GI3 SNORA25.13-201ENST00000516395 103 ntBASIC0.68□□□□□ -2.3
ZNF394Q53GI3 RNU7-153P-201ENST00000516455 62 ntBASIC0.68□□□□□ -2.3
ZNF394Q53GI3 MIR4460-201ENST00000577862 86 ntBASIC0.68□□□□□ -2.3
ZNF394Q53GI3 U7.6-201ENST00000610841 64 ntBASIC0.68□□□□□ -2.3
ZNF394Q53GI3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.68□□□□□ -2.3
ZNF394Q53GI3 AC006160.2-201ENST00000637708 154 ntBASIC0.68□□□□□ -2.3
ZNF394Q53GI3 SNORD73B-201ENST00000364394 72 ntBASIC0.67□□□□□ -2.3
ZNF394Q53GI3 RNU6-242P-201ENST00000384359 107 ntBASIC0.67□□□□□ -2.3
ZNF394Q53GI3 AC006210.1-201ENST00000424882 111 ntBASIC0.67□□□□□ -2.3
ZNF394Q53GI3 RNA5SP484-201ENST00000458857 111 ntBASIC0.67□□□□□ -2.3
ZNF394Q53GI3 FGF7P7-201ENST00000514120 227 ntBASIC0.67□□□□□ -2.3
ZNF394Q53GI3 RNU6-762P-201ENST00000517107 102 ntBASIC0.67□□□□□ -2.3
ZNF394Q53GI3 MIR5588-201ENST00000581890 63 ntBASIC0.67□□□□□ -2.3
ZNF394Q53GI3 AC069503.3-201ENST00000618674 145 ntBASIC0.67□□□□□ -2.3
ZNF394Q53GI3 MIR494-201ENST00000349529 81 ntBASIC0.66□□□□□ -2.3
ZNF394Q53GI3 MIR7-2-201ENST00000384970 110 ntBASIC0.66□□□□□ -2.3
ZNF394Q53GI3 MT-TY-201ENST00000387409 66 ntBASIC0.66□□□□□ -2.3
ZNF394Q53GI3 Y_RNA.607-201ENST00000410597 98 ntBASIC0.66□□□□□ -2.3
ZNF394Q53GI3 MIR548O2-201ENST00000616090 70 ntBASIC0.66□□□□□ -2.3
ZNF394Q53GI3 SNORD114-26-201ENST00000363543 72 ntBASIC0.65□□□□□ -2.31
ZNF394Q53GI3 SNORA2A-201ENST00000383885 135 ntBASIC0.65□□□□□ -2.31
ZNF394Q53GI3 RNU6-979P-201ENST00000383896 107 ntBASIC0.65□□□□□ -2.31
ZNF394Q53GI3 SNORD110-201ENST00000408189 75 ntBASIC0.65□□□□□ -2.31
ZNF394Q53GI3 AC140658.3-201ENST00000567603 271 ntBASIC0.65□□□□□ -2.31
ZNF394Q53GI3 NAMPTP3-201ENST00000569273 224 ntBASIC0.65□□□□□ -2.31
ZNF394Q53GI3 MIR216A-201ENST00000385063 110 ntBASIC0.64□□□□□ -2.31
ZNF394Q53GI3 AC022137.1-201ENST00000483735 151 ntBASIC0.64□□□□□ -2.31
ZNF394Q53GI3 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
ZNF394Q53GI3 SNORA26.2-201ENST00000390922 122 ntBASIC0.63□□□□□ -2.31
ZNF394Q53GI3 Y_RNA.660-201ENST00000516002 120 ntBASIC0.63□□□□□ -2.31
ZNF394Q53GI3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ZNF394Q53GI3 Y_RNA.73-201ENST00000362910 113 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 SNORD44.1-201ENST00000363202 61 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 Y_RNA.264-201ENST00000364665 102 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.62□□□□□ -2.31
ZNF394Q53GI3 RNU7-171P-201ENST00000459581 62 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 SNORA68.3-201ENST00000515906 83 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 RN7SL793P-201ENST00000583259 296 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 AC062037.1-201ENST00000605302 128 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
ZNF394Q53GI3 MIRLET7D-201ENST00000362263 87 ntBASIC0.61□□□□□ -2.31
ZNF394Q53GI3 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
ZNF394Q53GI3 RNU6-624P-201ENST00000363411 107 ntBASIC0.61□□□□□ -2.31
ZNF394Q53GI3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.61□□□□□ -2.31
ZNF394Q53GI3 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
ZNF394Q53GI3 MIR4679-1-201ENST00000637619 75 ntBASIC0.61□□□□□ -2.31
ZNF394Q53GI3 AC090625.1-201ENST00000357130 210 ntBASIC0.6□□□□□ -2.31
ZNF394Q53GI3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.6□□□□□ -2.31
ZNF394Q53GI3 SNORA24B-201ENST00000384176 131 ntBASIC0.6□□□□□ -2.31
ZNF394Q53GI3 RNU6-1152P-201ENST00000384576 107 ntBASIC0.6□□□□□ -2.31
ZNF394Q53GI3 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
ZNF394Q53GI3 MIR4752-201ENST00000579672 72 ntBASIC0.6□□□□□ -2.31
ZNF394Q53GI3 MIR3140-201ENST00000583685 90 ntBASIC0.6□□□□□ -2.31
ZNF394Q53GI3 RNU1-29P-201ENST00000606574 126 ntBASIC0.6□□□□□ -2.31
ZNF394Q53GI3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
ZNF394Q53GI3 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
ZNF394Q53GI3 RNY4P29-201ENST00000410801 97 ntBASIC0.59□□□□□ -2.31
ZNF394Q53GI3 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
ZNF394Q53GI3 RNU6-557P-201ENST00000516842 110 ntBASIC0.59□□□□□ -2.31
ZNF394Q53GI3 SNORA70.25-201ENST00000612741 95 ntBASIC0.59□□□□□ -2.31
ZNF394Q53GI3 SNORD77.2-201ENST00000391045 68 ntBASIC0.58□□□□□ -2.32
ZNF394Q53GI3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.58□□□□□ -2.32
ZNF394Q53GI3 RNU6-1052P-201ENST00000411398 104 ntBASIC0.58□□□□□ -2.32
ZNF394Q53GI3 AL450471.1-201ENST00000447509 127 ntBASIC0.58□□□□□ -2.32
ZNF394Q53GI3 RNU6-719P-201ENST00000516671 104 ntBASIC0.58□□□□□ -2.32
ZNF394Q53GI3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
ZNF394Q53GI3 RNU6-1276P-201ENST00000365372 104 ntBASIC0.57□□□□□ -2.32
ZNF394Q53GI3 AC097510.1-201ENST00000510945 133 ntBASIC0.57□□□□□ -2.32
ZNF394Q53GI3 YWHAEP2-201ENST00000580066 112 ntBASIC0.57□□□□□ -2.32
ZNF394Q53GI3 MIR6755-201ENST00000619993 66 ntBASIC0.57□□□□□ -2.32
ZNF394Q53GI3 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
ZNF394Q53GI3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
ZNF394Q53GI3 SNORD90-201ENST00000391145 111 ntBASIC0.56□□□□□ -2.32
ZNF394Q53GI3 RNU6-208P-201ENST00000362431 107 ntBASIC0.55□□□□□ -2.32
ZNF394Q53GI3 SNORD114-23-201ENST00000363536 72 ntBASIC0.55□□□□□ -2.32
ZNF394Q53GI3 RNU6V-201ENST00000384105 107 ntBASIC0.55□□□□□ -2.32
ZNF394Q53GI3 RNU6-592P-201ENST00000411333 103 ntBASIC0.55□□□□□ -2.32
ZNF394Q53GI3 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
ZNF394Q53GI3 MIR6779-201ENST00000617283 64 ntBASIC0.55□□□□□ -2.32
ZNF394Q53GI3 MIR760-201ENST00000390220 80 ntBASIC0.54□□□□□ -2.32
ZNF394Q53GI3 RNU6-129P-201ENST00000391022 107 ntBASIC0.54□□□□□ -2.32
ZNF394Q53GI3 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
ZNF394Q53GI3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.54□□□□□ -2.32
ZNF394Q53GI3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
ZNF394Q53GI3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.53□□□□□ -2.32
ZNF394Q53GI3 SNORD114-4-201ENST00000363962 75 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms