Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 Y_RNA.290-201ENST00000364879 114 ntBASIC0.2□□□□□ -2.38
SUMO3P55854 RNU6-652P-201ENST00000365488 107 ntBASIC0.2□□□□□ -2.38
SUMO3P55854 RNU6-811P-201ENST00000384069 107 ntBASIC0.2□□□□□ -2.38
SUMO3P55854 MIR451A-201ENST00000385059 72 ntBASIC0.2□□□□□ -2.38
SUMO3P55854 HMGN2P22-201ENST00000427588 175 ntBASIC0.2□□□□□ -2.38
SUMO3P55854 AC026421.1-201ENST00000519101 163 ntBASIC0.2□□□□□ -2.38
SUMO3P55854 AC104996.3-201ENST00000590718 94 ntBASIC0.2□□□□□ -2.38
SUMO3P55854 SNORD114-23-201ENST00000363536 72 ntBASIC0.19□□□□□ -2.38
SUMO3P55854 Y_RNA.609-201ENST00000410669 89 ntBASIC0.19□□□□□ -2.38
SUMO3P55854 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.19□□□□□ -2.38
SUMO3P55854 RNU6-782P-201ENST00000516852 104 ntBASIC0.19□□□□□ -2.38
SUMO3P55854 YWHAEP2-201ENST00000580066 112 ntBASIC0.19□□□□□ -2.38
SUMO3P55854 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
SUMO3P55854 MIR4677-201ENST00000584153 80 ntBASIC0.19□□□□□ -2.38
SUMO3P55854 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
SUMO3P55854 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SUMO3P55854 SNORA25.13-201ENST00000516395 103 ntBASIC0.18□□□□□ -2.38
SUMO3P55854 Y_RNA.491-201ENST00000384417 107 ntBASIC0.17□□□□□ -2.38
SUMO3P55854 MIR548O2-201ENST00000616090 70 ntBASIC0.17□□□□□ -2.38
SUMO3P55854 Y_RNA.81-201ENST00000362997 102 ntBASIC0.16□□□□□ -2.38
SUMO3P55854 RNU6-905P-201ENST00000384434 107 ntBASIC0.15□□□□□ -2.39
SUMO3P55854 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
SUMO3P55854 MALAT1.1-201ENST00000618249 95 ntBASIC0.15□□□□□ -2.39
SUMO3P55854 PVT1_3.1-201ENST00000620853 95 ntBASIC0.15□□□□□ -2.39
SUMO3P55854 uc_338.10-201ENST00000621872 182 ntBASIC0.15□□□□□ -2.39
SUMO3P55854 AC010487.4-201ENST00000637027 61 ntBASIC0.15□□□□□ -2.39
SUMO3P55854 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
SUMO3P55854 RNU6-153P-201ENST00000364422 104 ntBASIC0.14□□□□□ -2.39
SUMO3P55854 MIR610-201ENST00000385139 96 ntBASIC0.14□□□□□ -2.39
SUMO3P55854 RNU6-168P-201ENST00000516189 101 ntBASIC0.14□□□□□ -2.39
SUMO3P55854 RNU5B-6P-201ENST00000516765 68 ntBASIC0.14□□□□□ -2.39
SUMO3P55854 MIR4743-201ENST00000584576 69 ntBASIC0.14□□□□□ -2.39
SUMO3P55854 MIR924-201ENST00000638017 53 ntBASIC0.14□□□□□ -2.39
SUMO3P55854 SNORA63.2-201ENST00000362603 126 ntBASIC0.13□□□□□ -2.39
SUMO3P55854 RNU4-32P-201ENST00000363404 141 ntBASIC0.13□□□□□ -2.39
SUMO3P55854 RNU6-640P-201ENST00000363693 105 ntBASIC0.13□□□□□ -2.39
SUMO3P55854 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
SUMO3P55854 RNA5SP292-201ENST00000390974 118 ntBASIC0.13□□□□□ -2.39
SUMO3P55854 MIR892B-201ENST00000401279 77 ntBASIC0.13□□□□□ -2.39
SUMO3P55854 SNORA18.5-201ENST00000516616 101 ntBASIC0.13□□□□□ -2.39
SUMO3P55854 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
SUMO3P55854 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.13□□□□□ -2.39
SUMO3P55854 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
SUMO3P55854 RNY4P3-201ENST00000365254 95 ntBASIC0.12□□□□□ -2.39
SUMO3P55854 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
SUMO3P55854 MIR1236-201ENST00000408340 102 ntBASIC0.12□□□□□ -2.39
SUMO3P55854 FGF7P7-201ENST00000514120 227 ntBASIC0.12□□□□□ -2.39
SUMO3P55854 MIR4473-201ENST00000583731 91 ntBASIC0.12□□□□□ -2.39
SUMO3P55854 MIR3925-201ENST00000584674 77 ntBASIC0.12□□□□□ -2.39
SUMO3P55854 Y_RNA.407-201ENST00000383986 113 ntBASIC0.11□□□□□ -2.39
SUMO3P55854 RNU6V-201ENST00000384105 107 ntBASIC0.11□□□□□ -2.39
SUMO3P55854 MIR516B1-201ENST00000385211 90 ntBASIC0.11□□□□□ -2.39
SUMO3P55854 RNU6-1052P-201ENST00000411398 104 ntBASIC0.11□□□□□ -2.39
SUMO3P55854 RNU6-719P-201ENST00000516671 104 ntBASIC0.11□□□□□ -2.39
SUMO3P55854 RN7SL793P-201ENST00000583259 296 ntBASIC0.11□□□□□ -2.39
SUMO3P55854 AC084368.1-201ENST00000620935 65 ntBASIC0.11□□□□□ -2.39
SUMO3P55854 RNU6-161P-201ENST00000363051 106 ntBASIC0.1□□□□□ -2.39
SUMO3P55854 RNU6-1051P-201ENST00000365471 102 ntBASIC0.1□□□□□ -2.39
SUMO3P55854 SNORA75.1-201ENST00000391130 148 ntBASIC0.1□□□□□ -2.39
SUMO3P55854 RNA5SP89-201ENST00000410300 108 ntBASIC0.1□□□□□ -2.39
SUMO3P55854 MTATP6P29-201ENST00000415057 132 ntBASIC0.1□□□□□ -2.39
SUMO3P55854 RNA5SP325-201ENST00000363756 130 ntBASIC0.09□□□□□ -2.4
SUMO3P55854 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
SUMO3P55854 MIR876-201ENST00000401147 81 ntBASIC0.09□□□□□ -2.4
SUMO3P55854 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
SUMO3P55854 Y_RNA.118-201ENST00000363300 101 ntBASIC0.08□□□□□ -2.4
SUMO3P55854 Y_RNA.220-201ENST00000364244 109 ntBASIC0.08□□□□□ -2.4
SUMO3P55854 Y_RNA.660-201ENST00000516002 120 ntBASIC0.08□□□□□ -2.4
SUMO3P55854 SCARNA11.2-201ENST00000517183 154 ntBASIC0.08□□□□□ -2.4
SUMO3P55854 MIR488-201ENST00000365739 83 ntBASIC0.07□□□□□ -2.4
SUMO3P55854 Y_RNA.437-201ENST00000384113 113 ntBASIC0.07□□□□□ -2.4
SUMO3P55854 SNORD116-22-201ENST00000384430 92 ntBASIC0.07□□□□□ -2.4
SUMO3P55854 MIR548H2-201ENST00000408874 88 ntBASIC0.07□□□□□ -2.4
SUMO3P55854 MIR3140-201ENST00000583685 90 ntBASIC0.07□□□□□ -2.4
SUMO3P55854 RNY1P4-201ENST00000384595 115 ntBASIC0.06□□□□□ -2.4
SUMO3P55854 MIR489-201ENST00000384923 84 ntBASIC0.06□□□□□ -2.4
SUMO3P55854 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
SUMO3P55854 MIR4668-201ENST00000582284 70 ntBASIC0.06□□□□□ -2.4
SUMO3P55854 MIR548AE1-201ENST00000583292 70 ntBASIC0.06□□□□□ -2.4
SUMO3P55854 MIR145-201ENST00000384967 88 ntBASIC0.05□□□□□ -2.4
SUMO3P55854 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
SUMO3P55854 MIR4796-201ENST00000580742 81 ntBASIC0.05□□□□□ -2.4
SUMO3P55854 RNU6-633P-201ENST00000362612 103 ntBASIC0.04□□□□□ -2.4
SUMO3P55854 SNORA24B-201ENST00000384176 131 ntBASIC0.04□□□□□ -2.4
SUMO3P55854 RNU6-154P-201ENST00000384306 106 ntBASIC0.04□□□□□ -2.4
SUMO3P55854 MIR593-201ENST00000384856 100 ntBASIC0.04□□□□□ -2.4
SUMO3P55854 MIR519C-201ENST00000385053 87 ntBASIC0.04□□□□□ -2.4
SUMO3P55854 MIR4514-201ENST00000581410 57 ntBASIC0.04□□□□□ -2.4
SUMO3P55854 SNORD114-26-201ENST00000363543 72 ntBASIC0.03□□□□□ -2.4
SUMO3P55854 SNORD114-4-201ENST00000363962 75 ntBASIC0.03□□□□□ -2.4
SUMO3P55854 SNORD114-29-201ENST00000364819 70 ntBASIC0.03□□□□□ -2.4
SUMO3P55854 RNU6-54P-201ENST00000365563 107 ntBASIC0.03□□□□□ -2.4
SUMO3P55854 Y_RNA.558-201ENST00000384685 113 ntBASIC0.03□□□□□ -2.4
SUMO3P55854 RNU6-180P-201ENST00000516697 61 ntBASIC0.03□□□□□ -2.4
SUMO3P55854 MIR193B-201ENST00000384907 83 ntBASIC0.02□□□□□ -2.41
SUMO3P55854 Y_RNA.620-201ENST00000411009 88 ntBASIC0.02□□□□□ -2.41
SUMO3P55854 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.02□□□□□ -2.41
SUMO3P55854 RNU7-188P-201ENST00000517063 64 ntBASIC0.02□□□□□ -2.41
SUMO3P55854 MIR6718-201ENST00000616153 80 ntBASIC0.02□□□□□ -2.41
SUMO3P55854 MIR330-201ENST00000362196 94 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms