Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
SLC6A11P48066 MIR18A-201ENST00000362310 71 ntBASIC1.03□□□□□ -2.24
SLC6A11P48066 Y_RNA.205-201ENST00000364128 113 ntBASIC1.03□□□□□ -2.24
SLC6A11P48066 RNU6-1296P-201ENST00000383879 107 ntBASIC1.03□□□□□ -2.24
SLC6A11P48066 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
SLC6A11P48066 MIR548AG2-201ENST00000581228 64 ntBASIC1.03□□□□□ -2.24
SLC6A11P48066 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
SLC6A11P48066 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
SLC6A11P48066 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
SLC6A11P48066 RNU6-776P-201ENST00000364403 104 ntBASIC1.01□□□□□ -2.25
SLC6A11P48066 RNU6-1022P-201ENST00000365049 104 ntBASIC1.01□□□□□ -2.25
SLC6A11P48066 MIR889-201ENST00000401280 79 ntBASIC1.01□□□□□ -2.25
SLC6A11P48066 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
SLC6A11P48066 RNA5SP47-201ENST00000517230 109 ntBASIC1.01□□□□□ -2.25
SLC6A11P48066 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SLC6A11P48066 Y_RNA.12-201ENST00000362393 112 ntBASIC1□□□□□ -2.25
SLC6A11P48066 Y_RNA.371-201ENST00000365591 113 ntBASIC1□□□□□ -2.25
SLC6A11P48066 MIR617-201ENST00000385030 97 ntBASIC1□□□□□ -2.25
SLC6A11P48066 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
SLC6A11P48066 MIR4484-201ENST00000582855 83 ntBASIC1□□□□□ -2.25
SLC6A11P48066 AL353765.1-201ENST00000605514 183 ntBASIC1□□□□□ -2.25
SLC6A11P48066 AC145423.2-201ENST00000610631 239 ntBASIC1□□□□□ -2.25
SLC6A11P48066 NEAT1_2.1-201ENST00000620525 105 ntBASIC1□□□□□ -2.25
SLC6A11P48066 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SLC6A11P48066 RNA5SP436-201ENST00000516020 115 ntBASIC0.99□□□□□ -2.25
SLC6A11P48066 SCARNA16.5-201ENST00000517114 183 ntBASIC0.99□□□□□ -2.25
SLC6A11P48066 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.99□□□□□ -2.25
SLC6A11P48066 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
SLC6A11P48066 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
SLC6A11P48066 SNORA36.2-201ENST00000384004 127 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 SNORA24B-201ENST00000384176 131 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 Y_RNA.532-201ENST00000384590 113 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 MIR519E-201ENST00000385075 84 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 U3.27-201ENST00000391237 200 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 RNA5SP227-201ENST00000516184 113 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 RN7SL793P-201ENST00000583259 296 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 U7.4-201ENST00000614961 63 ntBASIC0.98□□□□□ -2.25
SLC6A11P48066 RNU6-726P-201ENST00000364680 107 ntBASIC0.97□□□□□ -2.25
SLC6A11P48066 RNU4-45P-201ENST00000365469 141 ntBASIC0.97□□□□□ -2.25
SLC6A11P48066 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SLC6A11P48066 RNU7-74P-201ENST00000459104 62 ntBASIC0.97□□□□□ -2.25
SLC6A11P48066 MIR1297-201ENST00000637311 77 ntBASIC0.97□□□□□ -2.25
SLC6A11P48066 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
SLC6A11P48066 MIR216A-201ENST00000385063 110 ntBASIC0.96□□□□□ -2.26
SLC6A11P48066 SNORD41.1-201ENST00000391000 69 ntBASIC0.96□□□□□ -2.26
SLC6A11P48066 RNU6-807P-201ENST00000516805 107 ntBASIC0.96□□□□□ -2.26
SLC6A11P48066 RNU6-303P-201ENST00000517091 106 ntBASIC0.96□□□□□ -2.26
SLC6A11P48066 YWHAEP2-201ENST00000580066 112 ntBASIC0.96□□□□□ -2.26
SLC6A11P48066 YWHAEP3-201ENST00000582767 121 ntBASIC0.96□□□□□ -2.26
SLC6A11P48066 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SLC6A11P48066 RNY1P8-201ENST00000383970 114 ntBASIC0.95□□□□□ -2.26
SLC6A11P48066 SCARNA18B-201ENST00000458806 135 ntBASIC0.95□□□□□ -2.26
SLC6A11P48066 RNA5SP94-201ENST00000516917 108 ntBASIC0.95□□□□□ -2.26
SLC6A11P48066 MIR216B-201ENST00000390186 82 ntBASIC0.94□□□□□ -2.26
SLC6A11P48066 RNU6-1177P-201ENST00000391058 104 ntBASIC0.94□□□□□ -2.26
SLC6A11P48066 RNU2-59P-201ENST00000410482 191 ntBASIC0.94□□□□□ -2.26
SLC6A11P48066 AC074348.1-201ENST00000426503 132 ntBASIC0.94□□□□□ -2.26
SLC6A11P48066 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
SLC6A11P48066 AC097510.1-201ENST00000510945 133 ntBASIC0.94□□□□□ -2.26
SLC6A11P48066 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
SLC6A11P48066 Y_RNA.788-201ENST00000622394 112 ntBASIC0.94□□□□□ -2.26
SLC6A11P48066 SNORA36.1-201ENST00000363424 132 ntBASIC0.93□□□□□ -2.26
SLC6A11P48066 RNU6-824P-201ENST00000363724 104 ntBASIC0.93□□□□□ -2.26
SLC6A11P48066 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.93□□□□□ -2.26
SLC6A11P48066 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
SLC6A11P48066 RNA5SP268-201ENST00000516828 124 ntBASIC0.93□□□□□ -2.26
SLC6A11P48066 CYP3A137P-201ENST00000562436 69 ntBASIC0.93□□□□□ -2.26
SLC6A11P48066 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
SLC6A11P48066 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.93□□□□□ -2.26
SLC6A11P48066 MIR4773-1-201ENST00000637203 78 ntBASIC0.93□□□□□ -2.26
SLC6A11P48066 RNU6-340P-201ENST00000364005 107 ntBASIC0.92□□□□□ -2.26
SLC6A11P48066 Y_RNA.374-201ENST00000365606 101 ntBASIC0.92□□□□□ -2.26
SLC6A11P48066 Y_RNA.606-201ENST00000410579 103 ntBASIC0.92□□□□□ -2.26
SLC6A11P48066 U6.81-201ENST00000612550 106 ntBASIC0.92□□□□□ -2.26
SLC6A11P48066 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.92□□□□□ -2.26
SLC6A11P48066 RNU6-681P-201ENST00000364012 104 ntBASIC0.91□□□□□ -2.26
SLC6A11P48066 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
SLC6A11P48066 RNU6-269P-201ENST00000391077 97 ntBASIC0.91□□□□□ -2.26
SLC6A11P48066 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SLC6A11P48066 MIR4460-201ENST00000577862 86 ntBASIC0.9□□□□□ -2.27
SLC6A11P48066 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
SLC6A11P48066 Y_RNA.258-201ENST00000364613 105 ntBASIC0.89□□□□□ -2.27
SLC6A11P48066 RNU6V-201ENST00000384105 107 ntBASIC0.89□□□□□ -2.27
SLC6A11P48066 Y_RNA.545-201ENST00000384652 105 ntBASIC0.89□□□□□ -2.27
SLC6A11P48066 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
SLC6A11P48066 RNU6-274P-201ENST00000459566 107 ntBASIC0.89□□□□□ -2.27
SLC6A11P48066 MIR3134-201ENST00000579433 74 ntBASIC0.89□□□□□ -2.27
SLC6A11P48066 MIR7107-201ENST00000611489 80 ntBASIC0.89□□□□□ -2.27
SLC6A11P48066 RNU6-382P-201ENST00000365181 106 ntBASIC0.88□□□□□ -2.27
SLC6A11P48066 RNU6-54P-201ENST00000365563 107 ntBASIC0.88□□□□□ -2.27
SLC6A11P48066 RNU6-154P-201ENST00000384306 106 ntBASIC0.88□□□□□ -2.27
SLC6A11P48066 RNA5SP484-201ENST00000458857 111 ntBASIC0.88□□□□□ -2.27
SLC6A11P48066 MIR548O2-201ENST00000616090 70 ntBASIC0.88□□□□□ -2.27
SLC6A11P48066 RNU1-141P-201ENST00000364623 158 ntBASIC0.87□□□□□ -2.27
SLC6A11P48066 SNORA8.1-201ENST00000384250 140 ntBASIC0.87□□□□□ -2.27
SLC6A11P48066 SNORA8.2-201ENST00000384372 139 ntBASIC0.87□□□□□ -2.27
SLC6A11P48066 Y_RNA.565-201ENST00000384719 101 ntBASIC0.87□□□□□ -2.27
SLC6A11P48066 AC093423.1-201ENST00000440817 142 ntBASIC0.87□□□□□ -2.27
SLC6A11P48066 Y_RNA.681-201ENST00000516445 113 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms