Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.34□□□□□ -2.62
SLC1A1P43005 SNORA63-201ENST00000363450 132 ntBASIC-1.34□□□□□ -2.62
SLC1A1P43005 RNY4P6-201ENST00000363667 96 ntBASIC-1.34□□□□□ -2.62
SLC1A1P43005 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.34□□□□□ -2.62
SLC1A1P43005 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.34□□□□□ -2.62
SLC1A1P43005 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.34□□□□□ -2.62
SLC1A1P43005 AC025521.1-201ENST00000621624 286 ntBASIC-1.34□□□□□ -2.62
SLC1A1P43005 MIR409-201ENST00000362237 79 ntBASIC-1.35□□□□□ -2.63
SLC1A1P43005 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.35□□□□□ -2.63
SLC1A1P43005 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.35□□□□□ -2.63
SLC1A1P43005 RNU6-592P-201ENST00000411333 103 ntBASIC-1.35□□□□□ -2.63
SLC1A1P43005 RNU6-781P-201ENST00000516377 101 ntBASIC-1.35□□□□□ -2.63
SLC1A1P43005 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.35□□□□□ -2.63
SLC1A1P43005 MIR4536-1-201ENST00000583537 88 ntBASIC-1.35□□□□□ -2.63
SLC1A1P43005 SNORA63.6-201ENST00000364921 119 ntBASIC-1.36□□□□□ -2.63
SLC1A1P43005 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.36□□□□□ -2.63
SLC1A1P43005 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.36□□□□□ -2.63
SLC1A1P43005 MIR513C-201ENST00000401352 84 ntBASIC-1.36□□□□□ -2.63
SLC1A1P43005 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.36□□□□□ -2.63
SLC1A1P43005 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.36□□□□□ -2.63
SLC1A1P43005 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.37□□□□□ -2.63
SLC1A1P43005 RNU6-905P-201ENST00000384434 107 ntBASIC-1.37□□□□□ -2.63
SLC1A1P43005 MIRLET7B-201ENST00000385140 83 ntBASIC-1.37□□□□□ -2.63
SLC1A1P43005 RNU6-861P-201ENST00000516745 106 ntBASIC-1.37□□□□□ -2.63
SLC1A1P43005 SNORA81.3-201ENST00000517283 198 ntBASIC-1.37□□□□□ -2.63
SLC1A1P43005 AP001340.1-201ENST00000624405 217 ntBASIC-1.37□□□□□ -2.63
SLC1A1P43005 AL158147.1-201ENST00000443970 75 ntBASIC-1.38□□□□□ -2.63
SLC1A1P43005 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.38□□□□□ -2.63
SLC1A1P43005 SNORD115-23-201ENST00000364461 82 ntBASIC-1.39□□□□□ -2.63
SLC1A1P43005 SNORD50.2-201ENST00000365465 70 ntBASIC-1.39□□□□□ -2.63
SLC1A1P43005 AL118496.2-201ENST00000448300 230 ntBASIC-1.39□□□□□ -2.63
SLC1A1P43005 AL500527.2-201ENST00000454105 95 ntBASIC-1.39□□□□□ -2.63
SLC1A1P43005 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.39□□□□□ -2.63
SLC1A1P43005 MIR587-201ENST00000384845 96 ntBASIC-1.4□□□□□ -2.63
SLC1A1P43005 RNU6-337P-201ENST00000391243 106 ntBASIC-1.4□□□□□ -2.63
SLC1A1P43005 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.4□□□□□ -2.63
SLC1A1P43005 RNY1P9-201ENST00000532431 109 ntBASIC-1.4□□□□□ -2.63
SLC1A1P43005 uc_338.19-201ENST00000616808 99 ntBASIC-1.4□□□□□ -2.63
SLC1A1P43005 MIR577-201ENST00000385196 96 ntBASIC-1.41□□□□□ -2.64
SLC1A1P43005 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.41□□□□□ -2.64
SLC1A1P43005 RNU7-85P-201ENST00000458851 63 ntBASIC-1.41□□□□□ -2.64
SLC1A1P43005 MIR4499-201ENST00000584834 69 ntBASIC-1.41□□□□□ -2.64
SLC1A1P43005 RNU6-274P-201ENST00000459566 107 ntBASIC-1.42□□□□□ -2.64
SLC1A1P43005 SNORD18.2-201ENST00000459604 70 ntBASIC-1.42□□□□□ -2.64
SLC1A1P43005 AC025166.1-201ENST00000612411 163 ntBASIC-1.42□□□□□ -2.64
SLC1A1P43005 SNORA63.2-201ENST00000362603 126 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 RNU6-495P-201ENST00000362995 107 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 RNU6-682P-201ENST00000363843 106 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 RNU6-132P-201ENST00000383863 107 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.43□□□□□ -2.64
SLC1A1P43005 RNU7-120P-201ENST00000459334 63 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 AL513043.2-201ENST00000573941 143 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 U7.2-201ENST00000607576 63 ntBASIC-1.43□□□□□ -2.64
SLC1A1P43005 MIR4694-201ENST00000578534 80 ntBASIC-1.44□□□□□ -2.64
SLC1A1P43005 MIR3140-201ENST00000583685 90 ntBASIC-1.44□□□□□ -2.64
SLC1A1P43005 MIR6738-201ENST00000619620 64 ntBASIC-1.44□□□□□ -2.64
SLC1A1P43005 MIR378F-201ENST00000578143 78 ntBASIC-1.45□□□□□ -2.64
SLC1A1P43005 MIR4324-201ENST00000584846 72 ntBASIC-1.45□□□□□ -2.64
SLC1A1P43005 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.46□□□□□ -2.64
SLC1A1P43005 RNU6-990P-201ENST00000364385 104 ntBASIC-1.46□□□□□ -2.64
SLC1A1P43005 SNORD116-18-201ENST00000383961 92 ntBASIC-1.46□□□□□ -2.64
SLC1A1P43005 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.46□□□□□ -2.64
SLC1A1P43005 MIR548U-201ENST00000390728 81 ntBASIC-1.46□□□□□ -2.64
SLC1A1P43005 AC021146.9-201ENST00000512503 156 ntBASIC-1.46□□□□□ -2.64
SLC1A1P43005 RNA5SP470-201ENST00000516463 106 ntBASIC-1.46□□□□□ -2.64
SLC1A1P43005 MIR548X2-201ENST00000579776 100 ntBASIC-1.46□□□□□ -2.64
SLC1A1P43005 SNORD58C-201ENST00000365223 64 ntBASIC-1.47□□□□□ -2.64
SLC1A1P43005 SNORA62.4-201ENST00000365504 151 ntBASIC-1.47□□□□□ -2.64
SLC1A1P43005 RNA5SP266-201ENST00000410273 108 ntBASIC-1.47□□□□□ -2.64
SLC1A1P43005 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.47□□□□□ -2.64
SLC1A1P43005 RNU6-832P-201ENST00000363319 107 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 RNU6-431P-201ENST00000383874 107 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 MIR124-2-201ENST00000385081 109 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 SNORD64-201ENST00000386683 67 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 SNORD57-201ENST00000448188 72 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 RNU6-327P-201ENST00000516270 127 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 MIR3064-201ENST00000581130 66 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 U6.96-201ENST00000636425 70 ntBASIC-1.48□□□□□ -2.65
SLC1A1P43005 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 RNU6-10P-201ENST00000384036 107 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 RNU6-24P-201ENST00000384440 107 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 MIR147A-201ENST00000385079 72 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 AC068339.1-201ENST00000526965 141 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 AC140658.3-201ENST00000567603 271 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 MIR4503-201ENST00000582187 83 ntBASIC-1.49□□□□□ -2.65
SLC1A1P43005 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.5□□□□□ -2.65
SLC1A1P43005 YWHAEP3-201ENST00000582767 121 ntBASIC-1.5□□□□□ -2.65
SLC1A1P43005 AC104996.3-201ENST00000590718 94 ntBASIC-1.5□□□□□ -2.65
SLC1A1P43005 RNY3P2-201ENST00000362918 102 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms