Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR519E-201ENST00000385075 84 ntBASIC0.88□□□□□ -2.27
COL6A2P12110 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.88□□□□□ -2.27
COL6A2P12110 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
COL6A2P12110 RNU6-228P-201ENST00000362700 106 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 Y_RNA.313-201ENST00000365095 103 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 RNU6-129P-201ENST00000391022 107 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 SNORD90-201ENST00000391145 111 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 MIR548L-201ENST00000408303 86 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 RNA5SP268-201ENST00000516828 124 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 RN7SL793P-201ENST00000583259 296 ntBASIC0.87□□□□□ -2.27
COL6A2P12110 RNU6-652P-201ENST00000365488 107 ntBASIC0.86□□□□□ -2.27
COL6A2P12110 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
COL6A2P12110 RNA5SP395-201ENST00000516567 118 ntBASIC0.86□□□□□ -2.27
COL6A2P12110 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
COL6A2P12110 AL162376.1-201ENST00000624117 175 ntBASIC0.86□□□□□ -2.27
COL6A2P12110 RNU6-315P-201ENST00000362666 107 ntBASIC0.85□□□□□ -2.27
COL6A2P12110 Y_RNA.264-201ENST00000364665 102 ntBASIC0.85□□□□□ -2.27
COL6A2P12110 SNORA24B-201ENST00000384176 131 ntBASIC0.85□□□□□ -2.27
COL6A2P12110 MIR140-201ENST00000385282 100 ntBASIC0.85□□□□□ -2.27
COL6A2P12110 RNU6-1275P-201ENST00000391087 107 ntBASIC0.85□□□□□ -2.27
COL6A2P12110 AC093423.1-201ENST00000440817 142 ntBASIC0.85□□□□□ -2.27
COL6A2P12110 MIR3140-201ENST00000583685 90 ntBASIC0.85□□□□□ -2.27
COL6A2P12110 RNU5F-1-201ENST00000362507 117 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 RNU6-716P-201ENST00000365621 103 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 SNORA36.2-201ENST00000384004 127 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 SNORA8.2-201ENST00000384372 139 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 MIR216A-201ENST00000385063 110 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 SNORD77.2-201ENST00000391045 68 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 AL450471.1-201ENST00000447509 127 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 RNA5SP227-201ENST00000516184 113 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
COL6A2P12110 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
COL6A2P12110 RNU6-478P-201ENST00000363904 110 ntBASIC0.83□□□□□ -2.28
COL6A2P12110 RNU6-686P-201ENST00000364839 107 ntBASIC0.83□□□□□ -2.28
COL6A2P12110 MIR1255A-201ENST00000408338 113 ntBASIC0.83□□□□□ -2.28
COL6A2P12110 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
COL6A2P12110 snoU13.17-201ENST00000458802 104 ntBASIC0.83□□□□□ -2.28
COL6A2P12110 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
COL6A2P12110 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
COL6A2P12110 Y_RNA.94-201ENST00000363068 106 ntBASIC0.82□□□□□ -2.28
COL6A2P12110 RNY1P8-201ENST00000383970 114 ntBASIC0.82□□□□□ -2.28
COL6A2P12110 RNU6-269P-201ENST00000391077 97 ntBASIC0.82□□□□□ -2.28
COL6A2P12110 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
COL6A2P12110 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
COL6A2P12110 MIRLET7A1-201ENST00000362295 80 ntBASIC0.81□□□□□ -2.28
COL6A2P12110 RNU6-208P-201ENST00000362431 107 ntBASIC0.81□□□□□ -2.28
COL6A2P12110 RNA5SP517-201ENST00000364724 117 ntBASIC0.81□□□□□ -2.28
COL6A2P12110 RNU6-279P-201ENST00000391297 101 ntBASIC0.81□□□□□ -2.28
COL6A2P12110 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.81□□□□□ -2.28
COL6A2P12110 MIR7107-201ENST00000611489 80 ntBASIC0.81□□□□□ -2.28
COL6A2P12110 RNU6-161P-201ENST00000363051 106 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 RNU1-141P-201ENST00000364623 158 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 RNU2-59P-201ENST00000410482 191 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 RNU6-1052P-201ENST00000411398 104 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 AC097510.1-201ENST00000510945 133 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 RNU6-719P-201ENST00000516671 104 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 CYP3A137P-201ENST00000562436 69 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 MIR4712-201ENST00000583750 82 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 MIR548O2-201ENST00000616090 70 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 AC092634.7-201ENST00000621022 103 ntBASIC0.8□□□□□ -2.28
COL6A2P12110 Y_RNA.30-201ENST00000362572 97 ntBASIC0.79□□□□□ -2.28
COL6A2P12110 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
COL6A2P12110 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
COL6A2P12110 SNORD118-201ENST00000363593 134 ntBASIC0.78□□□□□ -2.28
COL6A2P12110 Y_RNA.606-201ENST00000410579 103 ntBASIC0.78□□□□□ -2.28
COL6A2P12110 RNU6-1108P-201ENST00000516308 104 ntBASIC0.78□□□□□ -2.28
COL6A2P12110 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.78□□□□□ -2.28
COL6A2P12110 AC073869.9-201ENST00000641610 120 ntBASIC0.78□□□□□ -2.28
COL6A2P12110 MT-TY-201ENST00000387409 66 ntBASIC0.77□□□□□ -2.29
COL6A2P12110 RNU6-380P-201ENST00000410207 107 ntBASIC0.77□□□□□ -2.29
COL6A2P12110 SNORA40.8-201ENST00000411034 126 ntBASIC0.77□□□□□ -2.29
COL6A2P12110 YWHAEP2-201ENST00000580066 112 ntBASIC0.77□□□□□ -2.29
COL6A2P12110 YWHAEP3-201ENST00000582767 121 ntBASIC0.77□□□□□ -2.29
COL6A2P12110 RNU6-1177P-201ENST00000391058 104 ntBASIC0.76□□□□□ -2.29
COL6A2P12110 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
COL6A2P12110 RNU6-1094P-201ENST00000362416 104 ntBASIC0.75□□□□□ -2.29
COL6A2P12110 RNU6-24P-201ENST00000384440 107 ntBASIC0.75□□□□□ -2.29
COL6A2P12110 MIR193B-201ENST00000384907 83 ntBASIC0.75□□□□□ -2.29
COL6A2P12110 MIR4460-201ENST00000577862 86 ntBASIC0.75□□□□□ -2.29
COL6A2P12110 MIR518A1-201ENST00000385068 85 ntBASIC0.74□□□□□ -2.29
COL6A2P12110 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
COL6A2P12110 RNU6-857P-201ENST00000515893 110 ntBASIC0.74□□□□□ -2.29
COL6A2P12110 AC069503.3-201ENST00000618674 145 ntBASIC0.74□□□□□ -2.29
COL6A2P12110 Y_RNA.12-201ENST00000362393 112 ntBASIC0.73□□□□□ -2.29
COL6A2P12110 RNA5SP225-201ENST00000410874 135 ntBASIC0.73□□□□□ -2.29
COL6A2P12110 RNA5SP484-201ENST00000458857 111 ntBASIC0.73□□□□□ -2.29
COL6A2P12110 RNU7-24P-201ENST00000458867 62 ntBASIC0.73□□□□□ -2.29
COL6A2P12110 RNU6-303P-201ENST00000517091 106 ntBASIC0.73□□□□□ -2.29
COL6A2P12110 MIR1273G-201ENST00000577677 100 ntBASIC0.73□□□□□ -2.29
COL6A2P12110 U6.81-201ENST00000612550 106 ntBASIC0.73□□□□□ -2.29
COL6A2P12110 RNU6-340P-201ENST00000364005 107 ntBASIC0.72□□□□□ -2.29
COL6A2P12110 RNU6-681P-201ENST00000364012 104 ntBASIC0.72□□□□□ -2.29
COL6A2P12110 RNU6-848P-201ENST00000515948 107 ntBASIC0.72□□□□□ -2.29
COL6A2P12110 RNU6-617P-201ENST00000516147 107 ntBASIC0.72□□□□□ -2.29
COL6A2P12110 RNU6-473P-201ENST00000516164 107 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms