Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR889-201ENST00000401280 79 ntBASIC0.93□□□□□ -2.26
NPHS1O60500 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.93□□□□□ -2.26
NPHS1O60500 AC097510.1-201ENST00000510945 133 ntBASIC0.93□□□□□ -2.26
NPHS1O60500 MIR216B-201ENST00000390186 82 ntBASIC0.92□□□□□ -2.26
NPHS1O60500 RNU2-59P-201ENST00000410482 191 ntBASIC0.92□□□□□ -2.26
NPHS1O60500 AC093423.1-201ENST00000440817 142 ntBASIC0.92□□□□□ -2.26
NPHS1O60500 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.92□□□□□ -2.26
NPHS1O60500 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
NPHS1O60500 RNU6-340P-201ENST00000364005 107 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 Y_RNA.258-201ENST00000364613 105 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 SCARNA18B-201ENST00000458806 135 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 RNU6-303P-201ENST00000517091 106 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 MIR7107-201ENST00000611489 80 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 MIR548O2-201ENST00000616090 70 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 Y_RNA.788-201ENST00000622394 112 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 AL162376.1-201ENST00000624117 175 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 MIR4662A-201ENST00000637499 67 ntBASIC0.91□□□□□ -2.26
NPHS1O60500 RNU6-776P-201ENST00000364403 104 ntBASIC0.9□□□□□ -2.27
NPHS1O60500 RNU6-1022P-201ENST00000365049 104 ntBASIC0.9□□□□□ -2.27
NPHS1O60500 AC145423.2-201ENST00000610631 239 ntBASIC0.9□□□□□ -2.27
NPHS1O60500 U6.81-201ENST00000612550 106 ntBASIC0.9□□□□□ -2.27
NPHS1O60500 SNORA8.2-201ENST00000384372 139 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 Y_RNA.606-201ENST00000410579 103 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 RNA5SP247-201ENST00000411181 105 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 AC074348.1-201ENST00000426503 132 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 RNU6-807P-201ENST00000516805 107 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 AL078603.1-201ENST00000603824 313 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 U7.4-201ENST00000614961 63 ntBASIC0.89□□□□□ -2.27
NPHS1O60500 RNU1-141P-201ENST00000364623 158 ntBASIC0.88□□□□□ -2.27
NPHS1O60500 RNA5SP517-201ENST00000364724 117 ntBASIC0.88□□□□□ -2.27
NPHS1O60500 RNA5SP484-201ENST00000458857 111 ntBASIC0.88□□□□□ -2.27
NPHS1O60500 MIR4460-201ENST00000577862 86 ntBASIC0.88□□□□□ -2.27
NPHS1O60500 MIR8070-201ENST00000616510 88 ntBASIC0.88□□□□□ -2.27
NPHS1O60500 MIR4773-1-201ENST00000637203 78 ntBASIC0.88□□□□□ -2.27
NPHS1O60500 MIR1297-201ENST00000637311 77 ntBASIC0.88□□□□□ -2.27
NPHS1O60500 RNU6-382P-201ENST00000365181 106 ntBASIC0.87□□□□□ -2.27
NPHS1O60500 RNU6-54P-201ENST00000365563 107 ntBASIC0.87□□□□□ -2.27
NPHS1O60500 RNU6V-201ENST00000384105 107 ntBASIC0.87□□□□□ -2.27
NPHS1O60500 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
NPHS1O60500 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.87□□□□□ -2.27
NPHS1O60500 Y_RNA.224-201ENST00000364308 111 ntBASIC0.86□□□□□ -2.27
NPHS1O60500 MT-TY-201ENST00000387409 66 ntBASIC0.86□□□□□ -2.27
NPHS1O60500 RNU6-330P-201ENST00000363015 107 ntBASIC0.85□□□□□ -2.27
NPHS1O60500 SNORD114-27-201ENST00000363766 70 ntBASIC0.85□□□□□ -2.27
NPHS1O60500 RNU6-154P-201ENST00000384306 106 ntBASIC0.85□□□□□ -2.27
NPHS1O60500 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
NPHS1O60500 MIR1287-201ENST00000408492 90 ntBASIC0.85□□□□□ -2.27
NPHS1O60500 MIR3134-201ENST00000579433 74 ntBASIC0.85□□□□□ -2.27
NPHS1O60500 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.85□□□□□ -2.27
NPHS1O60500 AC092634.7-201ENST00000621022 103 ntBASIC0.85□□□□□ -2.27
NPHS1O60500 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
NPHS1O60500 RNU6-681P-201ENST00000364012 104 ntBASIC0.84□□□□□ -2.27
NPHS1O60500 MIR499A-201ENST00000384903 122 ntBASIC0.84□□□□□ -2.27
NPHS1O60500 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.84□□□□□ -2.27
NPHS1O60500 RNA5SP102-201ENST00000516865 106 ntBASIC0.84□□□□□ -2.27
NPHS1O60500 NAMPTP3-201ENST00000569273 224 ntBASIC0.84□□□□□ -2.27
NPHS1O60500 SNORA25.18-201ENST00000607153 114 ntBASIC0.84□□□□□ -2.27
NPHS1O60500 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
NPHS1O60500 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
NPHS1O60500 Y_RNA.36-201ENST00000362602 112 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 RNU6-495P-201ENST00000362995 107 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 Y_RNA.226-201ENST00000364337 114 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 RNU6-1296P-201ENST00000383879 107 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 SNORD75.2-201ENST00000408784 58 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 RNU5B-6P-201ENST00000516765 68 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 MIR4752-201ENST00000579672 72 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 MIR664A-201ENST00000626086 82 ntBASIC0.83□□□□□ -2.28
NPHS1O60500 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NPHS1O60500 RNU6-110P-201ENST00000384508 104 ntBASIC0.82□□□□□ -2.28
NPHS1O60500 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
NPHS1O60500 AC069271.1-201ENST00000445577 156 ntBASIC0.81□□□□□ -2.28
NPHS1O60500 SNORD42B-201ENST00000458893 67 ntBASIC0.81□□□□□ -2.28
NPHS1O60500 RNU6-274P-201ENST00000459566 107 ntBASIC0.81□□□□□ -2.28
NPHS1O60500 AC069503.3-201ENST00000618674 145 ntBASIC0.81□□□□□ -2.28
NPHS1O60500 AC073869.9-201ENST00000641610 120 ntBASIC0.81□□□□□ -2.28
NPHS1O60500 SNORA8.1-201ENST00000384250 140 ntBASIC0.8□□□□□ -2.28
NPHS1O60500 RNU7-24P-201ENST00000458867 62 ntBASIC0.8□□□□□ -2.28
NPHS1O60500 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
NPHS1O60500 SNORA70.25-201ENST00000612741 95 ntBASIC0.8□□□□□ -2.28
NPHS1O60500 MIR6504-201ENST00000613520 61 ntBASIC0.8□□□□□ -2.28
NPHS1O60500 MIR6734-201ENST00000621166 68 ntBASIC0.8□□□□□ -2.28
NPHS1O60500 SNORD118-201ENST00000363593 134 ntBASIC0.79□□□□□ -2.28
NPHS1O60500 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
NPHS1O60500 MIR1276-201ENST00000408707 83 ntBASIC0.79□□□□□ -2.28
NPHS1O60500 SNORA40.8-201ENST00000411034 126 ntBASIC0.79□□□□□ -2.28
NPHS1O60500 MIR4452-201ENST00000583004 71 ntBASIC0.79□□□□□ -2.28
NPHS1O60500 Y_RNA.565-201ENST00000384719 101 ntBASIC0.78□□□□□ -2.28
NPHS1O60500 AC006210.1-201ENST00000424882 111 ntBASIC0.78□□□□□ -2.28
NPHS1O60500 RNU4-54P-201ENST00000516428 129 ntBASIC0.78□□□□□ -2.28
NPHS1O60500 RNU6-70P-201ENST00000516438 60 ntBASIC0.78□□□□□ -2.28
NPHS1O60500 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
NPHS1O60500 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
NPHS1O60500 SNORD110-201ENST00000408189 75 ntBASIC0.77□□□□□ -2.29
NPHS1O60500 AL691482.2-201ENST00000457453 84 ntBASIC0.77□□□□□ -2.29
NPHS1O60500 Y_RNA.681-201ENST00000516445 113 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms