Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 MIR548J-201ENST00000408833 112 ntBASIC0.26□□□□□ -2.37
ITM2AO43736 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.26□□□□□ -2.37
ITM2AO43736 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
ITM2AO43736 MIR5582-201ENST00000579697 68 ntBASIC0.26□□□□□ -2.37
ITM2AO43736 MIR548AD-201ENST00000584780 82 ntBASIC0.26□□□□□ -2.37
ITM2AO43736 SNORA63.2-201ENST00000362603 126 ntBASIC0.25□□□□□ -2.37
ITM2AO43736 Y_RNA.125-201ENST00000363371 111 ntBASIC0.25□□□□□ -2.37
ITM2AO43736 Y_RNA.558-201ENST00000384685 113 ntBASIC0.25□□□□□ -2.37
ITM2AO43736 RNU6-127P-201ENST00000390897 107 ntBASIC0.25□□□□□ -2.37
ITM2AO43736 MIR1236-201ENST00000408340 102 ntBASIC0.25□□□□□ -2.37
ITM2AO43736 MIR548AE1-201ENST00000583292 70 ntBASIC0.25□□□□□ -2.37
ITM2AO43736 MIR4677-201ENST00000584153 80 ntBASIC0.25□□□□□ -2.37
ITM2AO43736 MIR4298-201ENST00000584380 73 ntBASIC0.25□□□□□ -2.37
ITM2AO43736 SNORA9.1-201ENST00000362412 131 ntBASIC0.24□□□□□ -2.37
ITM2AO43736 RNU6V-201ENST00000384105 107 ntBASIC0.24□□□□□ -2.37
ITM2AO43736 RNU6-675P-201ENST00000384236 104 ntBASIC0.24□□□□□ -2.37
ITM2AO43736 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
ITM2AO43736 Y_RNA.593-201ENST00000410292 98 ntBASIC0.24□□□□□ -2.37
ITM2AO43736 RNU7-129P-201ENST00000516128 62 ntBASIC0.24□□□□□ -2.37
ITM2AO43736 MIR4796-201ENST00000580742 81 ntBASIC0.24□□□□□ -2.37
ITM2AO43736 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
ITM2AO43736 AC243829.3-201ENST00000622177 108 ntBASIC0.24□□□□□ -2.37
ITM2AO43736 Y_RNA.17-201ENST00000362433 111 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 RNU6-54P-201ENST00000365563 107 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 MIR519C-201ENST00000385053 87 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 MIR216B-201ENST00000390186 82 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 SNORA25.13-201ENST00000516395 103 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 MIR5000-201ENST00000577717 103 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 MIR4473-201ENST00000583731 91 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 MIR151B-201ENST00000584249 96 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 MIR3925-201ENST00000584674 77 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 MIR6788-201ENST00000618842 66 ntBASIC0.23□□□□□ -2.37
ITM2AO43736 snoU13.17-201ENST00000458802 104 ntBASIC0.22□□□□□ -2.37
ITM2AO43736 RNA5SP170-201ENST00000517150 101 ntBASIC0.22□□□□□ -2.37
ITM2AO43736 AC243829.6-201ENST00000612652 106 ntBASIC0.22□□□□□ -2.37
ITM2AO43736 Y_RNA.369-201ENST00000365568 117 ntBASIC0.21□□□□□ -2.38
ITM2AO43736 MIR548H2-201ENST00000408874 88 ntBASIC0.21□□□□□ -2.38
ITM2AO43736 RNU6-237P-201ENST00000515985 71 ntBASIC0.21□□□□□ -2.38
ITM2AO43736 U7.6-201ENST00000610841 64 ntBASIC0.21□□□□□ -2.38
ITM2AO43736 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
ITM2AO43736 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
ITM2AO43736 RNU6-1134P-201ENST00000365156 101 ntBASIC0.2□□□□□ -2.38
ITM2AO43736 Y_RNA.437-201ENST00000384113 113 ntBASIC0.2□□□□□ -2.38
ITM2AO43736 SNORD42B-201ENST00000458893 67 ntBASIC0.2□□□□□ -2.38
ITM2AO43736 MIR6504-201ENST00000613520 61 ntBASIC0.2□□□□□ -2.38
ITM2AO43736 MIR548BB-201ENST00000626714 66 ntBASIC0.2□□□□□ -2.38
ITM2AO43736 RNU6-161P-201ENST00000363051 106 ntBASIC0.19□□□□□ -2.38
ITM2AO43736 Y_RNA.258-201ENST00000364613 105 ntBASIC0.19□□□□□ -2.38
ITM2AO43736 RNU6-294P-201ENST00000364999 102 ntBASIC0.19□□□□□ -2.38
ITM2AO43736 MTATP6P29-201ENST00000415057 132 ntBASIC0.19□□□□□ -2.38
ITM2AO43736 MIR643-201ENST00000385267 97 ntBASIC0.18□□□□□ -2.38
ITM2AO43736 RNA5SP193-201ENST00000410353 107 ntBASIC0.18□□□□□ -2.38
ITM2AO43736 RNU6-782P-201ENST00000516852 104 ntBASIC0.18□□□□□ -2.38
ITM2AO43736 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.18□□□□□ -2.38
ITM2AO43736 MIR4452-201ENST00000583004 71 ntBASIC0.18□□□□□ -2.38
ITM2AO43736 MIR6513-201ENST00000621188 64 ntBASIC0.18□□□□□ -2.38
ITM2AO43736 Y_RNA.73-201ENST00000362910 113 ntBASIC0.17□□□□□ -2.38
ITM2AO43736 SNORA25.9-201ENST00000365087 128 ntBASIC0.17□□□□□ -2.38
ITM2AO43736 Y_RNA.407-201ENST00000383986 113 ntBASIC0.17□□□□□ -2.38
ITM2AO43736 MIR516B1-201ENST00000385211 90 ntBASIC0.17□□□□□ -2.38
ITM2AO43736 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
ITM2AO43736 AC093729.1-201ENST00000513074 128 ntBASIC0.17□□□□□ -2.38
ITM2AO43736 AC140658.3-201ENST00000567603 271 ntBASIC0.17□□□□□ -2.38
ITM2AO43736 MIR4711-201ENST00000578274 70 ntBASIC0.17□□□□□ -2.38
ITM2AO43736 RNU6-495P-201ENST00000362995 107 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 RNY4P3-201ENST00000365254 95 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 VTRNA1-3-201ENST00000365645 89 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 MIR652-201ENST00000385278 98 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
ITM2AO43736 RNU6-1177P-201ENST00000391058 104 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 RNA5SP247-201ENST00000411181 105 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 MIR8070-201ENST00000616510 88 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 uc_338.10-201ENST00000621872 182 ntBASIC0.16□□□□□ -2.38
ITM2AO43736 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
ITM2AO43736 RNU6-824P-201ENST00000363724 104 ntBASIC0.15□□□□□ -2.39
ITM2AO43736 Y_RNA.611-201ENST00000410682 108 ntBASIC0.15□□□□□ -2.39
ITM2AO43736 RNU6-762P-201ENST00000517107 102 ntBASIC0.15□□□□□ -2.39
ITM2AO43736 AC104408.1-201ENST00000605241 170 ntBASIC0.15□□□□□ -2.39
ITM2AO43736 AC006160.2-201ENST00000637708 154 ntBASIC0.15□□□□□ -2.39
ITM2AO43736 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 RNU6-624P-201ENST00000363411 107 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 SNORD114-9-201ENST00000364370 72 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 RNU6-154P-201ENST00000384306 106 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 MIR876-201ENST00000401147 81 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 SCARNA11.2-201ENST00000517183 154 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 AL078603.1-201ENST00000603824 313 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
ITM2AO43736 RNU6-1255P-201ENST00000363434 112 ntBASIC0.13□□□□□ -2.39
ITM2AO43736 RNU6-652P-201ENST00000365488 107 ntBASIC0.13□□□□□ -2.39
ITM2AO43736 MIR936-201ENST00000401264 98 ntBASIC0.13□□□□□ -2.39
ITM2AO43736 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
ITM2AO43736 RNU7-188P-201ENST00000517063 64 ntBASIC0.13□□□□□ -2.39
ITM2AO43736 RN7SL660P-201ENST00000614852 299 ntBASIC0.13□□□□□ -2.39
ITM2AO43736 AC084368.1-201ENST00000620935 65 ntBASIC0.13□□□□□ -2.39
ITM2AO43736 RNU5F-1-201ENST00000362507 117 ntBASIC0.12□□□□□ -2.39
ITM2AO43736 RNA5SP325-201ENST00000363756 130 ntBASIC0.12□□□□□ -2.39
ITM2AO43736 SNORD115-37-201ENST00000363768 82 ntBASIC0.12□□□□□ -2.39
ITM2AO43736 Y_RNA.224-201ENST00000364308 111 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 247.8 ms