Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SNORD50.2-201ENST00000365465 70 ntBASIC-1.6□□□□□ -2.67
LSM1O15116 MIR587-201ENST00000384845 96 ntBASIC-1.6□□□□□ -2.67
LSM1O15116 AC008737.2-201ENST00000599446 118 ntBASIC-1.6□□□□□ -2.67
LSM1O15116 AC025521.1-201ENST00000621624 286 ntBASIC-1.6□□□□□ -2.67
LSM1O15116 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.61□□□□□ -2.67
LSM1O15116 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.61□□□□□ -2.67
LSM1O15116 MIR606-201ENST00000384851 96 ntBASIC-1.61□□□□□ -2.67
LSM1O15116 MTCYBP9-201ENST00000431021 303 ntBASIC-1.61□□□□□ -2.67
LSM1O15116 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.61□□□□□ -2.67
LSM1O15116 AC062037.2-201ENST00000610137 73 ntBASIC-1.61□□□□□ -2.67
LSM1O15116 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.62□□□□□ -2.67
LSM1O15116 MIR568-201ENST00000385036 95 ntBASIC-1.62□□□□□ -2.67
LSM1O15116 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.62□□□□□ -2.67
LSM1O15116 RNU7-85P-201ENST00000458851 63 ntBASIC-1.62□□□□□ -2.67
LSM1O15116 RNU6-719P-201ENST00000516671 104 ntBASIC-1.62□□□□□ -2.67
LSM1O15116 MIR4306-201ENST00000583390 91 ntBASIC-1.62□□□□□ -2.67
LSM1O15116 AP001340.1-201ENST00000624405 217 ntBASIC-1.62□□□□□ -2.67
LSM1O15116 RNU6-797P-201ENST00000363101 109 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 RNY4P6-201ENST00000363667 96 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 SNORA20.1-201ENST00000364790 130 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 SNORD64-201ENST00000386683 67 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 RNU6-816P-201ENST00000390914 107 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 RNU6-65P-201ENST00000516332 98 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 MIR4536-1-201ENST00000583537 88 ntBASIC-1.63□□□□□ -2.67
LSM1O15116 SNORA63.2-201ENST00000362603 126 ntBASIC-1.64□□□□□ -2.67
LSM1O15116 RNA5SP192-201ENST00000364404 120 ntBASIC-1.64□□□□□ -2.67
LSM1O15116 FGF7P7-201ENST00000514120 227 ntBASIC-1.64□□□□□ -2.67
LSM1O15116 MIR3115-201ENST00000577915 68 ntBASIC-1.64□□□□□ -2.67
LSM1O15116 YWHAEP3-201ENST00000582767 121 ntBASIC-1.64□□□□□ -2.67
LSM1O15116 SNORA24B-201ENST00000384176 131 ntBASIC-1.65□□□□□ -2.67
LSM1O15116 RNU6-738P-201ENST00000384531 106 ntBASIC-1.65□□□□□ -2.67
LSM1O15116 RNU6-781P-201ENST00000516377 101 ntBASIC-1.65□□□□□ -2.67
LSM1O15116 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.66□□□□□ -2.68
LSM1O15116 MIR577-201ENST00000385196 96 ntBASIC-1.66□□□□□ -2.68
LSM1O15116 AL158147.1-201ENST00000443970 75 ntBASIC-1.66□□□□□ -2.68
LSM1O15116 SCARNA18B-201ENST00000458806 135 ntBASIC-1.66□□□□□ -2.68
LSM1O15116 SNORA62.4-201ENST00000365504 151 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 RNU6-132P-201ENST00000383863 107 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 RNU7-24P-201ENST00000458867 62 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 AL117351.2-201ENST00000513571 157 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 MIR3165-201ENST00000579874 75 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 MIR382-201ENST00000637119 76 ntBASIC-1.67□□□□□ -2.68
LSM1O15116 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.68□□□□□ -2.68
LSM1O15116 SNORD18.2-201ENST00000459604 70 ntBASIC-1.68□□□□□ -2.68
LSM1O15116 RNY1P9-201ENST00000532431 109 ntBASIC-1.68□□□□□ -2.68
LSM1O15116 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.69□□□□□ -2.68
LSM1O15116 AL513043.2-201ENST00000573941 143 ntBASIC-1.69□□□□□ -2.68
LSM1O15116 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.69□□□□□ -2.68
LSM1O15116 RNU6-151P-201ENST00000364158 107 ntBASIC-1.7□□□□□ -2.68
LSM1O15116 RNU6-990P-201ENST00000364385 104 ntBASIC-1.7□□□□□ -2.68
LSM1O15116 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.7□□□□□ -2.68
LSM1O15116 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.7□□□□□ -2.68
LSM1O15116 AC140658.3-201ENST00000567603 271 ntBASIC-1.7□□□□□ -2.68
LSM1O15116 MIR4694-201ENST00000578534 80 ntBASIC-1.7□□□□□ -2.68
LSM1O15116 MIR3140-201ENST00000583685 90 ntBASIC-1.7□□□□□ -2.68
LSM1O15116 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.71□□□□□ -2.68
LSM1O15116 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.71□□□□□ -2.68
LSM1O15116 MIR4464-201ENST00000580818 92 ntBASIC-1.71□□□□□ -2.68
LSM1O15116 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.71□□□□□ -2.68
LSM1O15116 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.72□□□□□ -2.68
LSM1O15116 MIR1302-3-201ENST00000408128 138 ntBASIC-1.72□□□□□ -2.68
LSM1O15116 SNORD75.2-201ENST00000408784 58 ntBASIC-1.72□□□□□ -2.68
LSM1O15116 AP001094.1-201ENST00000579805 193 ntBASIC-1.72□□□□□ -2.68
LSM1O15116 MIR3064-201ENST00000581130 66 ntBASIC-1.72□□□□□ -2.68
LSM1O15116 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.73□□□□□ -2.69
LSM1O15116 MIR124-2-201ENST00000385081 109 ntBASIC-1.73□□□□□ -2.69
LSM1O15116 MIR409-201ENST00000362237 79 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 RNU6-832P-201ENST00000363319 107 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 RNU6-682P-201ENST00000363843 106 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 MIR548U-201ENST00000390728 81 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 AC021146.9-201ENST00000512503 156 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 RNU6-861P-201ENST00000516745 106 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 AC090617.8-201ENST00000623339 167 ntBASIC-1.74□□□□□ -2.69
LSM1O15116 RNU6-208P-201ENST00000362431 107 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 MIR513C-201ENST00000401352 84 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 RNU7-120P-201ENST00000459334 63 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 AC068339.1-201ENST00000526965 141 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 MIR4439-201ENST00000583746 80 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 U7.2-201ENST00000607576 63 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 AC025166.1-201ENST00000612411 163 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.75□□□□□ -2.69
LSM1O15116 SNORD114-17-201ENST00000364699 75 ntBASIC-1.76□□□□□ -2.69
LSM1O15116 SNORD57-201ENST00000448188 72 ntBASIC-1.76□□□□□ -2.69
LSM1O15116 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.76□□□□□ -2.69
LSM1O15116 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms