Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.05□□□□□ -2.24
TRIM38O00635 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.05□□□□□ -2.24
TRIM38O00635 RNU7-102P-201ENST00000458948 62 ntBASIC1.05□□□□□ -2.24
TRIM38O00635 RNU6-1223P-201ENST00000517124 104 ntBASIC1.05□□□□□ -2.24
TRIM38O00635 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.05□□□□□ -2.24
TRIM38O00635 RNU6-800P-201ENST00000384473 103 ntBASIC1.04□□□□□ -2.24
TRIM38O00635 MIR1827-201ENST00000408549 66 ntBASIC1.04□□□□□ -2.24
TRIM38O00635 RNU2-59P-201ENST00000410482 191 ntBASIC1.04□□□□□ -2.24
TRIM38O00635 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM38O00635 AC244505.6-201ENST00000452829 130 ntBASIC1.04□□□□□ -2.24
TRIM38O00635 AC097510.1-201ENST00000510945 133 ntBASIC1.04□□□□□ -2.24
TRIM38O00635 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM38O00635 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
TRIM38O00635 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
TRIM38O00635 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TRIM38O00635 Y_RNA.205-201ENST00000364128 113 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 RNU6-364P-201ENST00000384387 107 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 SNORD45A-201ENST00000384512 84 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 MIR938-201ENST00000401216 83 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 RNU6-287P-201ENST00000516230 98 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 MIR4804-201ENST00000581683 73 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 MIR3675-201ENST00000583661 73 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
TRIM38O00635 MIR373-201ENST00000362273 69 ntBASIC1.02□□□□□ -2.25
TRIM38O00635 Y_RNA.32-201ENST00000362589 110 ntBASIC1.02□□□□□ -2.25
TRIM38O00635 SNORD115-22-201ENST00000364456 82 ntBASIC1.02□□□□□ -2.25
TRIM38O00635 RNU7-56P-201ENST00000458744 62 ntBASIC1.02□□□□□ -2.25
TRIM38O00635 MIR548AG2-201ENST00000581228 64 ntBASIC1.02□□□□□ -2.25
TRIM38O00635 AC005520.4-201ENST00000604337 90 ntBASIC1.02□□□□□ -2.25
TRIM38O00635 RNU6-382P-201ENST00000365181 106 ntBASIC1.01□□□□□ -2.25
TRIM38O00635 MIR7-2-201ENST00000384970 110 ntBASIC1.01□□□□□ -2.25
TRIM38O00635 RNU6-1177P-201ENST00000391058 104 ntBASIC1.01□□□□□ -2.25
TRIM38O00635 SNORA31.14-201ENST00000516728 116 ntBASIC1.01□□□□□ -2.25
TRIM38O00635 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.01□□□□□ -2.25
TRIM38O00635 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
TRIM38O00635 uc_338.16-201ENST00000621804 95 ntBASIC1.01□□□□□ -2.25
TRIM38O00635 MIR1-1-201ENST00000362147 71 ntBASIC1□□□□□ -2.25
TRIM38O00635 RNU6-681P-201ENST00000364012 104 ntBASIC1□□□□□ -2.25
TRIM38O00635 RNU6-1335P-201ENST00000365426 107 ntBASIC1□□□□□ -2.25
TRIM38O00635 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
TRIM38O00635 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
TRIM38O00635 RNA5SP480-201ENST00000516840 109 ntBASIC1□□□□□ -2.25
TRIM38O00635 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1□□□□□ -2.25
TRIM38O00635 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRIM38O00635 SNORD45.1-201ENST00000363181 77 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 RNA5SP403-201ENST00000363598 108 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 RNU6-471P-201ENST00000383944 106 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 RNU6-1126P-201ENST00000384002 107 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 SNORD116-24-201ENST00000384549 92 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 RNU6-604P-201ENST00000390917 100 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 RNA5SP436-201ENST00000516020 115 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 RNU6-977P-201ENST00000516411 103 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 RNU7-161P-201ENST00000517289 62 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 MIR4773-1-201ENST00000637203 78 ntBASIC0.99□□□□□ -2.25
TRIM38O00635 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
TRIM38O00635 MIR100-201ENST00000385259 80 ntBASIC0.98□□□□□ -2.25
TRIM38O00635 RNU1-119P-201ENST00000391122 165 ntBASIC0.98□□□□□ -2.25
TRIM38O00635 RNU6-881P-201ENST00000516813 102 ntBASIC0.98□□□□□ -2.25
TRIM38O00635 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
TRIM38O00635 MIR3920-201ENST00000581751 86 ntBASIC0.98□□□□□ -2.25
TRIM38O00635 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
TRIM38O00635 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.98□□□□□ -2.25
TRIM38O00635 SNORD115-24-201ENST00000363528 82 ntBASIC0.97□□□□□ -2.25
TRIM38O00635 MIR520F-201ENST00000384824 87 ntBASIC0.97□□□□□ -2.25
TRIM38O00635 MIR9-2-201ENST00000384838 87 ntBASIC0.97□□□□□ -2.25
TRIM38O00635 MIR598-201ENST00000384868 97 ntBASIC0.97□□□□□ -2.25
TRIM38O00635 U3.27-201ENST00000391237 200 ntBASIC0.97□□□□□ -2.25
TRIM38O00635 RNU6-630P-201ENST00000391258 106 ntBASIC0.97□□□□□ -2.25
TRIM38O00635 RNU7-13P-201ENST00000516413 62 ntBASIC0.97□□□□□ -2.25
TRIM38O00635 SNORD113.1-201ENST00000363280 73 ntBASIC0.96□□□□□ -2.26
TRIM38O00635 SNORD115-44-201ENST00000365391 82 ntBASIC0.96□□□□□ -2.26
TRIM38O00635 RNU6-895P-201ENST00000384125 103 ntBASIC0.96□□□□□ -2.26
TRIM38O00635 Y_RNA.443-201ENST00000384135 111 ntBASIC0.96□□□□□ -2.26
TRIM38O00635 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
TRIM38O00635 AC244098.3-201ENST00000424803 96 ntBASIC0.96□□□□□ -2.26
TRIM38O00635 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
TRIM38O00635 RNU6-1057P-201ENST00000517162 102 ntBASIC0.96□□□□□ -2.26
TRIM38O00635 AL109933.3-201ENST00000619095 188 ntBASIC0.96□□□□□ -2.26
TRIM38O00635 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
TRIM38O00635 RNU7-104P-201ENST00000459398 79 ntBASIC0.95□□□□□ -2.26
TRIM38O00635 RNU6-274P-201ENST00000459566 107 ntBASIC0.95□□□□□ -2.26
TRIM38O00635 NAMPTP3-201ENST00000569273 224 ntBASIC0.95□□□□□ -2.26
TRIM38O00635 AL353765.1-201ENST00000605514 183 ntBASIC0.95□□□□□ -2.26
TRIM38O00635 MIR8053-201ENST00000613344 75 ntBASIC0.95□□□□□ -2.26
TRIM38O00635 SNORA25.4-201ENST00000363666 124 ntBASIC0.94□□□□□ -2.26
TRIM38O00635 MIR608-201ENST00000384820 100 ntBASIC0.94□□□□□ -2.26
TRIM38O00635 MIR519E-201ENST00000385075 84 ntBASIC0.94□□□□□ -2.26
TRIM38O00635 SNORD105-201ENST00000386910 85 ntBASIC0.94□□□□□ -2.26
TRIM38O00635 SNORD75.2-201ENST00000408784 58 ntBASIC0.94□□□□□ -2.26
TRIM38O00635 RNU6-982P-201ENST00000516216 102 ntBASIC0.94□□□□□ -2.26
TRIM38O00635 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
TRIM38O00635 RNU6-495P-201ENST00000362995 107 ntBASIC0.93□□□□□ -2.26
TRIM38O00635 SNORD114-26-201ENST00000363543 72 ntBASIC0.93□□□□□ -2.26
TRIM38O00635 Y_RNA.174-201ENST00000363781 105 ntBASIC0.93□□□□□ -2.26
TRIM38O00635 RNU6-54P-201ENST00000365563 107 ntBASIC0.93□□□□□ -2.26
TRIM38O00635 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRIM38O00635 MIR617-201ENST00000385030 97 ntBASIC0.93□□□□□ -2.26
TRIM38O00635 MIR644A-201ENST00000385262 94 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms