Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MIR548AE1-201ENST00000583292 70 ntBASIC-0.22□□□□□ -2.44
RTCAO00442 MIR4536-1-201ENST00000583537 88 ntBASIC-0.22□□□□□ -2.44
RTCAO00442 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.23□□□□□ -2.45
RTCAO00442 SNORD113-1-201ENST00000365321 69 ntBASIC-0.23□□□□□ -2.45
RTCAO00442 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.23□□□□□ -2.45
RTCAO00442 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.23□□□□□ -2.45
RTCAO00442 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.23□□□□□ -2.45
RTCAO00442 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.23□□□□□ -2.45
RTCAO00442 RNU7-188P-201ENST00000517063 64 ntBASIC-0.23□□□□□ -2.45
RTCAO00442 AC103810.7-201ENST00000607821 91 ntBASIC-0.23□□□□□ -2.45
RTCAO00442 RN7SL660P-201ENST00000614852 299 ntBASIC-0.23□□□□□ -2.45
RTCAO00442 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.24□□□□□ -2.45
RTCAO00442 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.24□□□□□ -2.45
RTCAO00442 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
RTCAO00442 SCARNA23-201ENST00000516060 130 ntBASIC-0.24□□□□□ -2.45
RTCAO00442 AL365222.1-201ENST00000614661 98 ntBASIC-0.24□□□□□ -2.45
RTCAO00442 RNU6-154P-201ENST00000384306 106 ntBASIC-0.25□□□□□ -2.45
RTCAO00442 RNU6-22P-201ENST00000384355 107 ntBASIC-0.25□□□□□ -2.45
RTCAO00442 MIR451A-201ENST00000385059 72 ntBASIC-0.25□□□□□ -2.45
RTCAO00442 RNU6-479P-201ENST00000516348 105 ntBASIC-0.25□□□□□ -2.45
RTCAO00442 RNU6-62P-201ENST00000516526 102 ntBASIC-0.25□□□□□ -2.45
RTCAO00442 RNU6-537P-201ENST00000517277 103 ntBASIC-0.25□□□□□ -2.45
RTCAO00442 MIR20A-201ENST00000362279 71 ntBASIC-0.26□□□□□ -2.45
RTCAO00442 RNU6-972P-201ENST00000391208 107 ntBASIC-0.26□□□□□ -2.45
RTCAO00442 AC244090.1-201ENST00000441884 93 ntBASIC-0.26□□□□□ -2.45
RTCAO00442 SNORD4B-201ENST00000459083 72 ntBASIC-0.26□□□□□ -2.45
RTCAO00442 RNU6-175P-201ENST00000516896 107 ntBASIC-0.26□□□□□ -2.45
RTCAO00442 AC012531.4-201ENST00000616509 177 ntBASIC-0.26□□□□□ -2.45
RTCAO00442 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.26□□□□□ -2.45
RTCAO00442 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.27□□□□□ -2.45
RTCAO00442 MIR1302-5-201ENST00000408164 150 ntBASIC-0.27□□□□□ -2.45
RTCAO00442 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.27□□□□□ -2.45
RTCAO00442 MIR3910-1-201ENST00000580936 111 ntBASIC-0.27□□□□□ -2.45
RTCAO00442 MIR3666-201ENST00000607845 111 ntBASIC-0.27□□□□□ -2.45
RTCAO00442 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.27□□□□□ -2.45
RTCAO00442 AC132825.6-201ENST00000638861 357 ntBASIC-0.27□□□□□ -2.45
RTCAO00442 MIR548U-201ENST00000390728 81 ntBASIC-0.28□□□□□ -2.45
RTCAO00442 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.28□□□□□ -2.45
RTCAO00442 RNU6-795P-201ENST00000516323 103 ntBASIC-0.28□□□□□ -2.45
RTCAO00442 RNU6-589P-201ENST00000516485 107 ntBASIC-0.28□□□□□ -2.45
RTCAO00442 MIR6507-201ENST00000613630 70 ntBASIC-0.28□□□□□ -2.45
RTCAO00442 MIR655-201ENST00000362159 97 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 RNA5SP257-201ENST00000363023 116 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 RNA5SP98-201ENST00000363158 137 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 MIR329-2-201ENST00000385029 84 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 MIR3064-201ENST00000581130 66 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 MIR548Z-201ENST00000584743 97 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.29□□□□□ -2.46
RTCAO00442 SNORD58A-201ENST00000383875 65 ntBASIC-0.3□□□□□ -2.46
RTCAO00442 RNU6-106P-201ENST00000384405 107 ntBASIC-0.3□□□□□ -2.46
RTCAO00442 MIR652-201ENST00000385278 98 ntBASIC-0.3□□□□□ -2.46
RTCAO00442 SNORA19.1-201ENST00000410656 129 ntBASIC-0.3□□□□□ -2.46
RTCAO00442 RNU6-887P-201ENST00000410660 100 ntBASIC-0.3□□□□□ -2.46
RTCAO00442 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.3□□□□□ -2.46
RTCAO00442 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 SNORA63.2-201ENST00000362603 126 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 SNORD114-4-201ENST00000363962 75 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 SNORD49B-201ENST00000365172 72 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 RNU6-132P-201ENST00000383863 107 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 RNU6-811P-201ENST00000384069 107 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 MIR214-201ENST00000385214 110 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 AC244250.2-201ENST00000418731 148 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 AC104996.3-201ENST00000590718 94 ntBASIC-0.31□□□□□ -2.46
RTCAO00442 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.32□□□□□ -2.46
RTCAO00442 SNORD114-12-201ENST00000365400 75 ntBASIC-0.32□□□□□ -2.46
RTCAO00442 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.32□□□□□ -2.46
RTCAO00442 RNU6-519P-201ENST00000410590 108 ntBASIC-0.32□□□□□ -2.46
RTCAO00442 SNORD2-201ENST00000459163 69 ntBASIC-0.32□□□□□ -2.46
RTCAO00442 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.32□□□□□ -2.46
RTCAO00442 SNORD116-10-201ENST00000363791 102 ntBASIC-0.33□□□□□ -2.46
RTCAO00442 AL603908.1-201ENST00000406098 201 ntBASIC-0.33□□□□□ -2.46
RTCAO00442 RNU6-554P-201ENST00000410466 106 ntBASIC-0.33□□□□□ -2.46
RTCAO00442 RNU6-313P-201ENST00000516317 112 ntBASIC-0.33□□□□□ -2.46
RTCAO00442 RNU6-158P-201ENST00000517104 100 ntBASIC-0.33□□□□□ -2.46
RTCAO00442 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.34□□□□□ -2.46
RTCAO00442 SNORA24B-201ENST00000384176 131 ntBASIC-0.34□□□□□ -2.46
RTCAO00442 MIR590-201ENST00000385008 97 ntBASIC-0.34□□□□□ -2.46
RTCAO00442 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.34□□□□□ -2.46
RTCAO00442 RNA5SP300-201ENST00000391197 107 ntBASIC-0.34□□□□□ -2.46
RTCAO00442 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
RTCAO00442 MIR6129-201ENST00000616087 109 ntBASIC-0.34□□□□□ -2.46
RTCAO00442 RNU6-54P-201ENST00000365563 107 ntBASIC-0.35□□□□□ -2.47
RTCAO00442 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.35□□□□□ -2.47
RTCAO00442 RNA5SP285-201ENST00000516619 119 ntBASIC-0.35□□□□□ -2.47
RTCAO00442 MIR4263-201ENST00000584745 83 ntBASIC-0.35□□□□□ -2.47
RTCAO00442 RNU6-766P-201ENST00000362478 107 ntBASIC-0.36□□□□□ -2.47
RTCAO00442 RNU2-51P-201ENST00000410708 197 ntBASIC-0.36□□□□□ -2.47
RTCAO00442 RNU7-24P-201ENST00000458867 62 ntBASIC-0.36□□□□□ -2.47
RTCAO00442 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.36□□□□□ -2.47
RTCAO00442 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.36□□□□□ -2.47
RTCAO00442 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.37□□□□□ -2.47
RTCAO00442 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
RTCAO00442 RNU6-495P-201ENST00000362995 107 ntBASIC-0.38□□□□□ -2.47
RTCAO00442 SNORD114-31-201ENST00000363219 75 ntBASIC-0.38□□□□□ -2.47
RTCAO00442 RNY4P3-201ENST00000365254 95 ntBASIC-0.38□□□□□ -2.47
RTCAO00442 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.38□□□□□ -2.47
RTCAO00442 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.38□□□□□ -2.47
RTCAO00442 SNORA49-201ENST00000386157 136 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms