Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SNORD114-31-201ENST00000363219 75 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNU6-46P-201ENST00000383860 107 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 MIR652-201ENST00000385278 98 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNU6-935P-201ENST00000410371 100 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 SNORA19.1-201ENST00000410656 129 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 AC244250.2-201ENST00000418731 148 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNU6-537P-201ENST00000517277 103 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 MIR4636-201ENST00000582271 80 ntBASIC-0.21□□□□□ -2.44
TMX2-CTNND1H3BSU7 SNORA18.1-201ENST00000363418 128 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNA5SP205-201ENST00000364653 136 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNU6-132P-201ENST00000383863 107 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNU6-154P-201ENST00000384306 106 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNU6-813P-201ENST00000384691 107 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNU6-904P-201ENST00000516206 101 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 RNA5SP476-201ENST00000516613 103 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 AC103810.7-201ENST00000607821 91 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 MIR6086-201ENST00000638065 55 ntBASIC-0.22□□□□□ -2.44
TMX2-CTNND1H3BSU7 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD116-21-201ENST00000384507 92 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORA49-201ENST00000386157 136 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-644P-201ENST00000391155 98 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-795P-201ENST00000516323 103 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 AC145423.2-201ENST00000610631 239 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 AL365222.1-201ENST00000614661 98 ntBASIC-0.23□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD45B-201ENST00000364617 72 ntBASIC-0.24□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.24□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-811P-201ENST00000384069 107 ntBASIC-0.24□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-880P-201ENST00000384526 107 ntBASIC-0.24□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD4B-201ENST00000459083 72 ntBASIC-0.24□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-54P-201ENST00000365563 107 ntBASIC-0.25□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR451A-201ENST00000385059 72 ntBASIC-0.25□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD42B-201ENST00000458893 67 ntBASIC-0.25□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR4536-1-201ENST00000583537 88 ntBASIC-0.25□□□□□ -2.45
TMX2-CTNND1H3BSU7 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.25□□□□□ -2.45
TMX2-CTNND1H3BSU7 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.26□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD114-29-201ENST00000364819 70 ntBASIC-0.26□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.26□□□□□ -2.45
TMX2-CTNND1H3BSU7 U3.27-201ENST00000391237 200 ntBASIC-0.26□□□□□ -2.45
TMX2-CTNND1H3BSU7 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.26□□□□□ -2.45
TMX2-CTNND1H3BSU7 AL590491.3-201ENST00000610731 82 ntBASIC-0.26□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD49B-201ENST00000365172 72 ntBASIC-0.27□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD114-12-201ENST00000365400 75 ntBASIC-0.27□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR582-201ENST00000365731 98 ntBASIC-0.27□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORA24B-201ENST00000384176 131 ntBASIC-0.27□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR216B-201ENST00000390186 82 ntBASIC-0.27□□□□□ -2.45
TMX2-CTNND1H3BSU7 HAR1A.1-201ENST00000459583 118 ntBASIC-0.27□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR3064-201ENST00000581130 66 ntBASIC-0.27□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR20A-201ENST00000362279 71 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-106P-201ENST00000384405 107 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 SNORD90-201ENST00000391145 111 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 Z95118.1-201ENST00000421372 247 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 AC244090.1-201ENST00000441884 93 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 RNU6-65P-201ENST00000516332 98 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR4802-201ENST00000581881 80 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 MIR3140-201ENST00000583685 90 ntBASIC-0.28□□□□□ -2.45
TMX2-CTNND1H3BSU7 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU4-36P-201ENST00000364294 144 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 SNORD58A-201ENST00000383875 65 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 MIR590-201ENST00000385008 97 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNA5SP300-201ENST00000391197 107 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 AC008267.6-201ENST00000441664 139 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 SCARNA23-201ENST00000516060 130 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-412P-201ENST00000516434 106 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-719P-201ENST00000516671 104 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 MIR3666-201ENST00000607845 111 ntBASIC-0.29□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-476P-201ENST00000384726 107 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 MIR9-2-201ENST00000384838 87 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNA5SP292-201ENST00000390974 118 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 MIR548E-201ENST00000408287 88 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-589P-201ENST00000516485 107 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 MIR4645-201ENST00000583158 77 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 AC104996.3-201ENST00000590718 94 ntBASIC-0.3□□□□□ -2.46
TMX2-CTNND1H3BSU7 SNORA63.2-201ENST00000362603 126 ntBASIC-0.31□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-22P-201ENST00000384355 107 ntBASIC-0.31□□□□□ -2.46
TMX2-CTNND1H3BSU7 MIR548M-201ENST00000408260 86 ntBASIC-0.31□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-554P-201ENST00000410466 106 ntBASIC-0.31□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.31□□□□□ -2.46
TMX2-CTNND1H3BSU7 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.31□□□□□ -2.46
TMX2-CTNND1H3BSU7 AC097510.1-201ENST00000510945 133 ntBASIC-0.31□□□□□ -2.46
TMX2-CTNND1H3BSU7 MIR6129-201ENST00000616087 109 ntBASIC-0.31□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-495P-201ENST00000362995 107 ntBASIC-0.32□□□□□ -2.46
TMX2-CTNND1H3BSU7 SNORD113-1-201ENST00000365321 69 ntBASIC-0.32□□□□□ -2.46
TMX2-CTNND1H3BSU7 SNORA19-201ENST00000384737 128 ntBASIC-0.32□□□□□ -2.46
TMX2-CTNND1H3BSU7 FGF7P7-201ENST00000514120 227 ntBASIC-0.32□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-762P-201ENST00000517107 102 ntBASIC-0.32□□□□□ -2.46
TMX2-CTNND1H3BSU7 MIR3910-1-201ENST00000580936 111 ntBASIC-0.32□□□□□ -2.46
TMX2-CTNND1H3BSU7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.33□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-109P-201ENST00000516364 107 ntBASIC-0.33□□□□□ -2.46
TMX2-CTNND1H3BSU7 RNU6-184P-201ENST00000516514 107 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms