Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.39□□□□□ -2.19
FOXD3Q9UJU5 MIR1297-201ENST00000637311 77 ntBASIC1.39□□□□□ -2.19
FOXD3Q9UJU5 MIR216B-201ENST00000390186 82 ntBASIC1.38□□□□□ -2.19
FOXD3Q9UJU5 SNORD90-201ENST00000391145 111 ntBASIC1.38□□□□□ -2.19
FOXD3Q9UJU5 RNU6-807P-201ENST00000516805 107 ntBASIC1.38□□□□□ -2.19
FOXD3Q9UJU5 U7.4-201ENST00000614961 63 ntBASIC1.38□□□□□ -2.19
FOXD3Q9UJU5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
FOXD3Q9UJU5 ZNF209P-201ENST00000593450 2304 ntBASIC1.38□□□□□ -2.19
FOXD3Q9UJU5 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
FOXD3Q9UJU5 RNU6-1126P-201ENST00000384002 107 ntBASIC1.37□□□□□ -2.19
FOXD3Q9UJU5 RNU7-104P-201ENST00000459398 79 ntBASIC1.37□□□□□ -2.19
FOXD3Q9UJU5 RNU6-1229P-201ENST00000364295 107 ntBASIC1.36□□□□□ -2.19
FOXD3Q9UJU5 MIR644A-201ENST00000385262 94 ntBASIC1.36□□□□□ -2.19
FOXD3Q9UJU5 MIR2113-201ENST00000459007 91 ntBASIC1.36□□□□□ -2.19
FOXD3Q9UJU5 YWHAEP2-201ENST00000580066 112 ntBASIC1.36□□□□□ -2.19
FOXD3Q9UJU5 MIR3920-201ENST00000581751 86 ntBASIC1.36□□□□□ -2.19
FOXD3Q9UJU5 YWHAEP3-201ENST00000582767 121 ntBASIC1.36□□□□□ -2.19
FOXD3Q9UJU5 AC067863.3-201ENST00000624172 122 ntBASIC1.36□□□□□ -2.19
FOXD3Q9UJU5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
FOXD3Q9UJU5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FOXD3Q9UJU5 SNORD28-201ENST00000384706 75 ntBASIC1.35□□□□□ -2.19
FOXD3Q9UJU5 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
FOXD3Q9UJU5 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
FOXD3Q9UJU5 RNU6-303P-201ENST00000517091 106 ntBASIC1.35□□□□□ -2.19
FOXD3Q9UJU5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
FOXD3Q9UJU5 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
FOXD3Q9UJU5 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
FOXD3Q9UJU5 RNU4-45P-201ENST00000365469 141 ntBASIC1.34□□□□□ -2.19
FOXD3Q9UJU5 MIR1323-201ENST00000408090 73 ntBASIC1.34□□□□□ -2.19
FOXD3Q9UJU5 RNU2-59P-201ENST00000410482 191 ntBASIC1.34□□□□□ -2.19
FOXD3Q9UJU5 RNU7-74P-201ENST00000459104 62 ntBASIC1.34□□□□□ -2.19
FOXD3Q9UJU5 MIR3612-201ENST00000579753 87 ntBASIC1.34□□□□□ -2.19
FOXD3Q9UJU5 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 SNORA24B-201ENST00000384176 131 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 MIR617-201ENST00000385030 97 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 MIR320A-201ENST00000385302 82 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 snoU13.17-201ENST00000458802 104 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 snoU13.18-201ENST00000459483 104 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 AC097510.1-201ENST00000510945 133 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 MIR4421-201ENST00000578133 69 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 MIR3140-201ENST00000583685 90 ntBASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
FOXD3Q9UJU5 Y_RNA.12-201ENST00000362393 112 ntBASIC1.32□□□□□ -2.2
FOXD3Q9UJU5 MIR489-201ENST00000384923 84 ntBASIC1.32□□□□□ -2.2
FOXD3Q9UJU5 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
FOXD3Q9UJU5 AC244669.1-204ENST00000621564 178 ntBASIC1.32□□□□□ -2.2
FOXD3Q9UJU5 RNU6-681P-201ENST00000364012 104 ntBASIC1.31□□□□□ -2.2
FOXD3Q9UJU5 RNU6-1335P-201ENST00000365426 107 ntBASIC1.31□□□□□ -2.2
FOXD3Q9UJU5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
FOXD3Q9UJU5 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
FOXD3Q9UJU5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.31□□□□□ -2.2
FOXD3Q9UJU5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.31□□□□□ -2.2
FOXD3Q9UJU5 MIR3678-201ENST00000578455 94 ntBASIC1.31□□□□□ -2.2
FOXD3Q9UJU5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.3□□□□□ -2.2
FOXD3Q9UJU5 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
FOXD3Q9UJU5 SNORD41.1-201ENST00000391000 69 ntBASIC1.3□□□□□ -2.2
FOXD3Q9UJU5 AC074348.1-201ENST00000426503 132 ntBASIC1.3□□□□□ -2.2
FOXD3Q9UJU5 RNA5SP47-201ENST00000517230 109 ntBASIC1.3□□□□□ -2.2
FOXD3Q9UJU5 MIR548AG2-201ENST00000581228 64 ntBASIC1.3□□□□□ -2.2
FOXD3Q9UJU5 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.3□□□□□ -2.2
FOXD3Q9UJU5 Y_RNA.606-201ENST00000410579 103 ntBASIC1.29□□□□□ -2.2
FOXD3Q9UJU5 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
FOXD3Q9UJU5 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.29□□□□□ -2.2
FOXD3Q9UJU5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
FOXD3Q9UJU5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
FOXD3Q9UJU5 Y_RNA.532-201ENST00000384590 113 ntBASIC1.28□□□□□ -2.2
FOXD3Q9UJU5 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
FOXD3Q9UJU5 MIR6504-201ENST00000613520 61 ntBASIC1.28□□□□□ -2.2
FOXD3Q9UJU5 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
FOXD3Q9UJU5 RNU6-340P-201ENST00000364005 107 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 Y_RNA.545-201ENST00000384652 105 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 RNU6-1177P-201ENST00000391058 104 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 MIR548L-201ENST00000408303 86 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 SNORD99-201ENST00000408612 74 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 MIR1276-201ENST00000408707 83 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 RNU6-1052P-201ENST00000411398 104 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 RNU6-719P-201ENST00000516671 104 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 SCARNA16.5-201ENST00000517114 183 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 U6.81-201ENST00000612550 106 ntBASIC1.27□□□□□ -2.21
FOXD3Q9UJU5 MIR519E-201ENST00000385075 84 ntBASIC1.26□□□□□ -2.21
FOXD3Q9UJU5 AC244098.3-201ENST00000424803 96 ntBASIC1.26□□□□□ -2.21
FOXD3Q9UJU5 SCARNA18B-201ENST00000458806 135 ntBASIC1.26□□□□□ -2.21
FOXD3Q9UJU5 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
FOXD3Q9UJU5 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
FOXD3Q9UJU5 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.26□□□□□ -2.21
FOXD3Q9UJU5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
FOXD3Q9UJU5 AC011195.1-201ENST00000578177 177 ntBASIC1.25□□□□□ -2.21
FOXD3Q9UJU5 MIR18A-201ENST00000362310 71 ntBASIC1.24□□□□□ -2.21
FOXD3Q9UJU5 Y_RNA.36-201ENST00000362602 112 ntBASIC1.24□□□□□ -2.21
FOXD3Q9UJU5 RNU6-726P-201ENST00000364680 107 ntBASIC1.24□□□□□ -2.21
FOXD3Q9UJU5 Y_RNA.371-201ENST00000365591 113 ntBASIC1.24□□□□□ -2.21
FOXD3Q9UJU5 MIR889-201ENST00000401280 79 ntBASIC1.24□□□□□ -2.21
FOXD3Q9UJU5 MIR4661-201ENST00000582720 75 ntBASIC1.24□□□□□ -2.21
FOXD3Q9UJU5 Y_RNA.681-201ENST00000516445 113 ntBASIC1.23□□□□□ -2.21
FOXD3Q9UJU5 RNA5SP61-201ENST00000516453 100 ntBASIC1.23□□□□□ -2.21
FOXD3Q9UJU5 MIR6828-201ENST00000636181 60 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms