Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-557P-201ENST00000516842 110 ntBASIC1.01□□□□□ -2.25
EBF3Q9H4W6 MIR3973-201ENST00000579824 107 ntBASIC1.01□□□□□ -2.25
EBF3Q9H4W6 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
EBF3Q9H4W6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
EBF3Q9H4W6 RNU6-535P-201ENST00000384722 107 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 MIR599-201ENST00000385069 95 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 AC097635.1-201ENST00000450678 155 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 SCARNA18B-201ENST00000458806 135 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 RNU6-1265P-201ENST00000516342 103 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 RNA5SP480-201ENST00000516840 109 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1□□□□□ -2.25
EBF3Q9H4W6 MIR4696-201ENST00000581431 70 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 MTRNR2L2-201ENST00000604882 87 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 MIR4662A-201ENST00000637499 67 ntBASIC1□□□□□ -2.25
EBF3Q9H4W6 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
EBF3Q9H4W6 RNU6-364P-201ENST00000384387 107 ntBASIC0.99□□□□□ -2.25
EBF3Q9H4W6 MIR548U-201ENST00000390728 81 ntBASIC0.99□□□□□ -2.25
EBF3Q9H4W6 RNU7-10P-201ENST00000607194 63 ntBASIC0.99□□□□□ -2.25
EBF3Q9H4W6 AC145423.2-201ENST00000610631 239 ntBASIC0.99□□□□□ -2.25
EBF3Q9H4W6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
EBF3Q9H4W6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 RNU6-686P-201ENST00000364839 107 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 RNU6-994P-201ENST00000410507 111 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 RNU6-523P-201ENST00000516304 54 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 RNU6-977P-201ENST00000516411 103 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 AC138907.6-201ENST00000568401 126 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 AC138869.1-201ENST00000568623 124 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 MIR3140-201ENST00000583685 90 ntBASIC0.98□□□□□ -2.25
EBF3Q9H4W6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
EBF3Q9H4W6 RNU6-664P-201ENST00000362381 107 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 MIR200A-201ENST00000384875 90 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 MIR100-201ENST00000385259 80 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 MIR1827-201ENST00000408549 66 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 AC244505.6-201ENST00000452829 130 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 RNA5SP436-201ENST00000516020 115 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 SNORA31.14-201ENST00000516728 116 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 uc_338.16-201ENST00000621804 95 ntBASIC0.97□□□□□ -2.25
EBF3Q9H4W6 MIR1-1-201ENST00000362147 71 ntBASIC0.96□□□□□ -2.26
EBF3Q9H4W6 SNORD101-201ENST00000384027 73 ntBASIC0.96□□□□□ -2.26
EBF3Q9H4W6 MIR520F-201ENST00000384824 87 ntBASIC0.96□□□□□ -2.26
EBF3Q9H4W6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
EBF3Q9H4W6 FGF7P7-201ENST00000514120 227 ntBASIC0.96□□□□□ -2.26
EBF3Q9H4W6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
EBF3Q9H4W6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.96□□□□□ -2.26
EBF3Q9H4W6 RNU6-1051P-201ENST00000365471 102 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 Y_RNA.565-201ENST00000384719 101 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 MIR598-201ENST00000384868 97 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 SNORD77.2-201ENST00000391045 68 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 RNU1-119P-201ENST00000391122 165 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 FABP5P4-201ENST00000437203 171 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 AC067940.1-201ENST00000458411 300 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 MIR3134-201ENST00000579433 74 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 MIR4484-201ENST00000582855 83 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.95□□□□□ -2.26
EBF3Q9H4W6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.95□□□□□ -2.26
EBF3Q9H4W6 RNU6-1094P-201ENST00000362416 104 ntBASIC0.94□□□□□ -2.26
EBF3Q9H4W6 RNU6-208P-201ENST00000362431 107 ntBASIC0.94□□□□□ -2.26
EBF3Q9H4W6 Y_RNA.207-201ENST00000364142 106 ntBASIC0.94□□□□□ -2.26
EBF3Q9H4W6 Y_RNA.596-201ENST00000410462 109 ntBASIC0.94□□□□□ -2.26
EBF3Q9H4W6 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
EBF3Q9H4W6 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
EBF3Q9H4W6 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.94□□□□□ -2.26
EBF3Q9H4W6 SNORD114-26-201ENST00000363543 72 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 Y_RNA.239-201ENST00000364444 113 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 SNORA24B-201ENST00000384176 131 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 MIR2113-201ENST00000459007 91 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 U7.7-201ENST00000459276 60 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 Y_RNA.660-201ENST00000516002 120 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 RNU7-161P-201ENST00000517289 62 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 MIR548AG2-201ENST00000581228 64 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 U7.4-201ENST00000614961 63 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 MIR664A-201ENST00000626086 82 ntBASIC0.93□□□□□ -2.26
EBF3Q9H4W6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
EBF3Q9H4W6 Y_RNA.36-201ENST00000362602 112 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 RNA5SP403-201ENST00000363598 108 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 RNU6-1052P-201ENST00000411398 104 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.92□□□□□ -2.26
EBF3Q9H4W6 SNORD124-201ENST00000459577 104 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 RNU6-287P-201ENST00000516230 98 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 RNU6-719P-201ENST00000516671 104 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 AL136317.1-201ENST00000612653 226 ntBASIC0.92□□□□□ -2.26
EBF3Q9H4W6 RNU6-330P-201ENST00000363015 107 ntBASIC0.91□□□□□ -2.26
EBF3Q9H4W6 MIR451A-201ENST00000385059 72 ntBASIC0.91□□□□□ -2.26
EBF3Q9H4W6 MIR644A-201ENST00000385262 94 ntBASIC0.91□□□□□ -2.26
EBF3Q9H4W6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
EBF3Q9H4W6 SNORD89-201ENST00000390981 114 ntBASIC0.91□□□□□ -2.26
EBF3Q9H4W6 RNU6-935P-201ENST00000410371 100 ntBASIC0.91□□□□□ -2.26
EBF3Q9H4W6 AC074348.1-201ENST00000426503 132 ntBASIC0.91□□□□□ -2.26
EBF3Q9H4W6 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms