Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MIR101-2-201ENST00000362195 79 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 RNA5SP245-201ENST00000364239 121 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 SNORD115-22-201ENST00000364456 82 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 SNORD45A-201ENST00000384512 84 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 SNORD83.1-201ENST00000411362 77 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 AC097635.1-201ENST00000450678 155 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-765P-201ENST00000516916 99 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
SH3RF3Q8TEJ3 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
SH3RF3Q8TEJ3 RNU7-10P-201ENST00000607194 63 ntBASIC1.45□□□□□ -2.18
SH3RF3Q8TEJ3 MIR96-201ENST00000362288 78 ntBASIC1.44□□□□□ -2.18
SH3RF3Q8TEJ3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.44□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-987P-201ENST00000384759 104 ntBASIC1.44□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-630P-201ENST00000391258 106 ntBASIC1.44□□□□□ -2.18
SH3RF3Q8TEJ3 AC036111.3-201ENST00000526389 112 ntBASIC1.44□□□□□ -2.18
SH3RF3Q8TEJ3 MIR3675-201ENST00000583661 73 ntBASIC1.44□□□□□ -2.18
SH3RF3Q8TEJ3 RNY4P3-201ENST00000365254 95 ntBASIC1.43□□□□□ -2.18
SH3RF3Q8TEJ3 SNORD114-22-201ENST00000365423 72 ntBASIC1.43□□□□□ -2.18
SH3RF3Q8TEJ3 Y_RNA.443-201ENST00000384135 111 ntBASIC1.43□□□□□ -2.18
SH3RF3Q8TEJ3 MIR1257-201ENST00000408490 117 ntBASIC1.43□□□□□ -2.18
SH3RF3Q8TEJ3 AC097510.1-201ENST00000510945 133 ntBASIC1.43□□□□□ -2.18
SH3RF3Q8TEJ3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SH3RF3Q8TEJ3 MIR599-201ENST00000385069 95 ntBASIC1.42□□□□□ -2.18
SH3RF3Q8TEJ3 MIR125B2-201ENST00000385128 89 ntBASIC1.42□□□□□ -2.18
SH3RF3Q8TEJ3 RNU4-37P-201ENST00000410214 84 ntBASIC1.42□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-935P-201ENST00000410371 100 ntBASIC1.42□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-1052P-201ENST00000411398 104 ntBASIC1.42□□□□□ -2.18
SH3RF3Q8TEJ3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.42□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-719P-201ENST00000516671 104 ntBASIC1.42□□□□□ -2.18
SH3RF3Q8TEJ3 MIR3664-201ENST00000579074 99 ntBASIC1.42□□□□□ -2.18
SH3RF3Q8TEJ3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-369P-201ENST00000362515 102 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 SNORD114-27-201ENST00000363766 70 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-681P-201ENST00000364012 104 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 MTND4LP19-201ENST00000403051 166 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 AL512310.8-201ENST00000550183 120 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 AC022709.1-201ENST00000615967 87 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 AL109933.3-201ENST00000619095 188 ntBASIC1.41□□□□□ -2.18
SH3RF3Q8TEJ3 SNORA25.4-201ENST00000363666 124 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 SNORD113.3-201ENST00000364630 78 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-934P-201ENST00000365154 107 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-499P-201ENST00000365615 107 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 MIR451A-201ENST00000385059 72 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-881P-201ENST00000516813 102 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 AC138907.6-201ENST00000568401 126 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 AC138869.1-201ENST00000568623 124 ntBASIC1.4□□□□□ -2.19
SH3RF3Q8TEJ3 SNORD45.1-201ENST00000363181 77 ntBASIC1.39□□□□□ -2.19
SH3RF3Q8TEJ3 SNORD113.1-201ENST00000363280 73 ntBASIC1.39□□□□□ -2.19
SH3RF3Q8TEJ3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.39□□□□□ -2.19
SH3RF3Q8TEJ3 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
SH3RF3Q8TEJ3 MIR4771-2-201ENST00000577758 74 ntBASIC1.39□□□□□ -2.19
SH3RF3Q8TEJ3 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
SH3RF3Q8TEJ3 MIR4511-201ENST00000582784 87 ntBASIC1.39□□□□□ -2.19
SH3RF3Q8TEJ3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.39□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-604P-201ENST00000390917 100 ntBASIC1.38□□□□□ -2.19
SH3RF3Q8TEJ3 AC244505.6-201ENST00000452829 130 ntBASIC1.38□□□□□ -2.19
SH3RF3Q8TEJ3 RNU7-40P-201ENST00000516397 64 ntBASIC1.38□□□□□ -2.19
SH3RF3Q8TEJ3 RN7SKP88-201ENST00000516847 250 ntBASIC1.38□□□□□ -2.19
SH3RF3Q8TEJ3 7SK.8-201ENST00000612110 250 ntBASIC1.38□□□□□ -2.19
SH3RF3Q8TEJ3 7SK.11-201ENST00000615477 250 ntBASIC1.38□□□□□ -2.19
SH3RF3Q8TEJ3 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
SH3RF3Q8TEJ3 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-382P-201ENST00000365181 106 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-669P-201ENST00000365575 107 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 MIR598-201ENST00000384868 97 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 AC110620.1-201ENST00000416042 228 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 RPS26P5-201ENST00000418544 335 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 AC093423.1-201ENST00000440817 142 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-287P-201ENST00000516230 98 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 MIR4676-201ENST00000583078 72 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 AC106800.4-201ENST00000614905 153 ntBASIC1.37□□□□□ -2.19
SH3RF3Q8TEJ3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-535P-201ENST00000384722 107 ntBASIC1.36□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-1177P-201ENST00000391058 104 ntBASIC1.36□□□□□ -2.19
SH3RF3Q8TEJ3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SH3RF3Q8TEJ3 MIR548AG2-201ENST00000581228 64 ntBASIC1.36□□□□□ -2.19
SH3RF3Q8TEJ3 AC008608.1-201ENST00000603910 127 ntBASIC1.36□□□□□ -2.19
SH3RF3Q8TEJ3 MIR8053-201ENST00000613344 75 ntBASIC1.36□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-1216P-201ENST00000362590 107 ntBASIC1.35□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-895P-201ENST00000384125 103 ntBASIC1.35□□□□□ -2.19
SH3RF3Q8TEJ3 MIR6767-201ENST00000637302 66 ntBASIC1.35□□□□□ -2.19
SH3RF3Q8TEJ3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SH3RF3Q8TEJ3 Y_RNA.178-201ENST00000363832 102 ntBASIC1.34□□□□□ -2.19
SH3RF3Q8TEJ3 RNU1-93P-201ENST00000364704 169 ntBASIC1.34□□□□□ -2.19
SH3RF3Q8TEJ3 U3.27-201ENST00000391237 200 ntBASIC1.34□□□□□ -2.19
SH3RF3Q8TEJ3 SNORD111-201ENST00000408139 94 ntBASIC1.34□□□□□ -2.19
SH3RF3Q8TEJ3 RNU7-102P-201ENST00000458948 62 ntBASIC1.34□□□□□ -2.19
SH3RF3Q8TEJ3 RNU6-982P-201ENST00000516216 102 ntBASIC1.34□□□□□ -2.19
SH3RF3Q8TEJ3 AC103706.3-201ENST00000636297 85 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 369.5 ms