Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNU7-102P-201ENST00000458948 62 ntBASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 AC027335.2-201ENST00000624030 375 ntBASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SHKBP1Q8TBC3 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
SHKBP1Q8TBC3 AC023827.1-201ENST00000569247 97 ntBASIC1.67□□□□□ -2.14
SHKBP1Q8TBC3 SNORD53B-201ENST00000577887 78 ntBASIC1.67□□□□□ -2.14
SHKBP1Q8TBC3 AL078603.1-201ENST00000603824 313 ntBASIC1.67□□□□□ -2.14
SHKBP1Q8TBC3 AL109933.3-201ENST00000619095 188 ntBASIC1.67□□□□□ -2.14
SHKBP1Q8TBC3 SNORA40.6-201ENST00000391153 128 ntBASIC1.66□□□□□ -2.14
SHKBP1Q8TBC3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
SHKBP1Q8TBC3 SNORD75.2-201ENST00000408784 58 ntBASIC1.65□□□□□ -2.15
SHKBP1Q8TBC3 RNU7-24P-201ENST00000458867 62 ntBASIC1.65□□□□□ -2.15
SHKBP1Q8TBC3 SNORA31.2-201ENST00000516019 134 ntBASIC1.65□□□□□ -2.15
SHKBP1Q8TBC3 RNU6-982P-201ENST00000516216 102 ntBASIC1.65□□□□□ -2.15
SHKBP1Q8TBC3 MIR548AG2-201ENST00000581228 64 ntBASIC1.65□□□□□ -2.15
SHKBP1Q8TBC3 MIR4804-201ENST00000581683 73 ntBASIC1.65□□□□□ -2.15
SHKBP1Q8TBC3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHKBP1Q8TBC3 MIR1323-201ENST00000408090 73 ntBASIC1.64□□□□□ -2.15
SHKBP1Q8TBC3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.64□□□□□ -2.15
SHKBP1Q8TBC3 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
SHKBP1Q8TBC3 RNU7-13P-201ENST00000516413 62 ntBASIC1.64□□□□□ -2.15
SHKBP1Q8TBC3 SNORA44.1-201ENST00000517031 108 ntBASIC1.64□□□□□ -2.15
SHKBP1Q8TBC3 AC069503.3-201ENST00000618674 145 ntBASIC1.64□□□□□ -2.15
SHKBP1Q8TBC3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 RNA5SP403-201ENST00000363598 108 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 SNORA67.6-201ENST00000391093 99 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 AL691482.2-201ENST00000457453 84 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 RNU7-56P-201ENST00000458744 62 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 BX248123.2-201ENST00000606318 124 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 uc_338.16-201ENST00000621804 95 ntBASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SHKBP1Q8TBC3 RNU6-495P-201ENST00000362995 107 ntBASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 RNU7-21P-201ENST00000459430 62 ntBASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 SNORA31.14-201ENST00000516728 116 ntBASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 RN7SKP88-201ENST00000516847 250 ntBASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 MIR3920-201ENST00000581751 86 ntBASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 7SK.8-201ENST00000612110 250 ntBASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 7SK.11-201ENST00000615477 250 ntBASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 7SK.13-201ENST00000622040 250 ntBASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SHKBP1Q8TBC3 RNU6-1039P-201ENST00000383931 107 ntBASIC1.61□□□□□ -2.15
SHKBP1Q8TBC3 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
SHKBP1Q8TBC3 AL591704.2-201ENST00000421658 181 ntBASIC1.61□□□□□ -2.15
SHKBP1Q8TBC3 RNU7-161P-201ENST00000517289 62 ntBASIC1.61□□□□□ -2.15
SHKBP1Q8TBC3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
SHKBP1Q8TBC3 SNORD115-24-201ENST00000363528 82 ntBASIC1.6□□□□□ -2.15
SHKBP1Q8TBC3 MIR633-201ENST00000384821 98 ntBASIC1.6□□□□□ -2.15
SHKBP1Q8TBC3 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
SHKBP1Q8TBC3 RNU6-977P-201ENST00000516411 103 ntBASIC1.6□□□□□ -2.15
SHKBP1Q8TBC3 NAMPTP3-201ENST00000569273 224 ntBASIC1.6□□□□□ -2.15
SHKBP1Q8TBC3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SHKBP1Q8TBC3 MIR216B-201ENST00000390186 82 ntBASIC1.59□□□□□ -2.15
SHKBP1Q8TBC3 RNU1-119P-201ENST00000391122 165 ntBASIC1.59□□□□□ -2.15
SHKBP1Q8TBC3 AC079150.2-201ENST00000443733 78 ntBASIC1.59□□□□□ -2.15
SHKBP1Q8TBC3 MIR8070-201ENST00000616510 88 ntBASIC1.59□□□□□ -2.15
SHKBP1Q8TBC3 SNORA80D-201ENST00000384488 135 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 RNU6-141P-201ENST00000410499 105 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 RNU6-994P-201ENST00000410507 111 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 MIR6509-201ENST00000614603 85 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 AL157834.3-201ENST00000615543 103 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 MIR548O2-201ENST00000616090 70 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 AC073869.9-201ENST00000641610 120 ntBASIC1.58□□□□□ -2.16
SHKBP1Q8TBC3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
SHKBP1Q8TBC3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.57□□□□□ -2.16
SHKBP1Q8TBC3 MIR617-201ENST00000385030 97 ntBASIC1.57□□□□□ -2.16
SHKBP1Q8TBC3 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
SHKBP1Q8TBC3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.57□□□□□ -2.16
SHKBP1Q8TBC3 MTND4LP1-201ENST00000446263 157 ntBASIC1.57□□□□□ -2.16
SHKBP1Q8TBC3 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 RNU6-668P-201ENST00000364180 107 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 MIR100-201ENST00000385259 80 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 MIR1287-201ENST00000408492 90 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 RNU7-90P-201ENST00000459216 62 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 MIR3198-2-201ENST00000577868 80 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
SHKBP1Q8TBC3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 RNU6-54P-201ENST00000365563 107 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 Y_RNA.375-201ENST00000365625 101 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 MIR203A-201ENST00000384836 110 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 MIR519E-201ENST00000385075 84 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 RNU6-910P-201ENST00000390844 107 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 RNU7-104P-201ENST00000459398 79 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 SNORD79.1-201ENST00000516069 84 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
SHKBP1Q8TBC3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SHKBP1Q8TBC3 MIR1-1-201ENST00000362147 71 ntBASIC1.54□□□□□ -2.16
SHKBP1Q8TBC3 MIR520F-201ENST00000384824 87 ntBASIC1.54□□□□□ -2.16
SHKBP1Q8TBC3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.54□□□□□ -2.16
SHKBP1Q8TBC3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.54□□□□□ -2.16
SHKBP1Q8TBC3 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 240.8 ms