Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR548H5-201ENST00000580314 60 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 MIR6857-201ENST00000613267 93 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 TRDV1-202ENST00000621643 102 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SYNE4Q8N205 Y_RNA.32-201ENST00000362589 110 ntBASIC1.2□□□□□ -2.22
SYNE4Q8N205 RNU6-364P-201ENST00000384387 107 ntBASIC1.2□□□□□ -2.22
SYNE4Q8N205 RNU6-535P-201ENST00000384722 107 ntBASIC1.2□□□□□ -2.22
SYNE4Q8N205 MIR938-201ENST00000401216 83 ntBASIC1.2□□□□□ -2.22
SYNE4Q8N205 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SYNE4Q8N205 RNU6-1260P-201ENST00000362944 107 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 RNU6-624P-201ENST00000363411 107 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 SNORD115-37-201ENST00000363768 82 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 Y_RNA.433-201ENST00000384089 102 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 RNU6-24P-201ENST00000384440 107 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 MIR599-201ENST00000385069 95 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 MIR100-201ENST00000385259 80 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SYNE4Q8N205 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.19□□□□□ -2.22
SYNE4Q8N205 RNU6-977P-201ENST00000516411 103 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 Y_RNA.788-201ENST00000622394 112 ntBASIC1.19□□□□□ -2.22
SYNE4Q8N205 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
SYNE4Q8N205 Y_RNA.491-201ENST00000384417 107 ntBASIC1.18□□□□□ -2.22
SYNE4Q8N205 Y_RNA.532-201ENST00000384590 113 ntBASIC1.18□□□□□ -2.22
SYNE4Q8N205 MIR520F-201ENST00000384824 87 ntBASIC1.18□□□□□ -2.22
SYNE4Q8N205 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
SYNE4Q8N205 RNU6-1108P-201ENST00000516308 104 ntBASIC1.18□□□□□ -2.22
SYNE4Q8N205 MIR4714-201ENST00000580728 77 ntBASIC1.18□□□□□ -2.22
SYNE4Q8N205 RNU6-161P-201ENST00000363051 106 ntBASIC1.17□□□□□ -2.22
SYNE4Q8N205 MIR1827-201ENST00000408549 66 ntBASIC1.17□□□□□ -2.22
SYNE4Q8N205 AC097635.1-201ENST00000450678 155 ntBASIC1.17□□□□□ -2.22
SYNE4Q8N205 SNORA31.14-201ENST00000516728 116 ntBASIC1.17□□□□□ -2.22
SYNE4Q8N205 RNA5SP330-201ENST00000517096 96 ntBASIC1.17□□□□□ -2.22
SYNE4Q8N205 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
SYNE4Q8N205 SNORA63.2-201ENST00000362603 126 ntBASIC1.16□□□□□ -2.22
SYNE4Q8N205 RNU6-129P-201ENST00000391022 107 ntBASIC1.16□□□□□ -2.22
SYNE4Q8N205 RNU6-1265P-201ENST00000516342 103 ntBASIC1.16□□□□□ -2.22
SYNE4Q8N205 MIR4696-201ENST00000581431 70 ntBASIC1.16□□□□□ -2.22
SYNE4Q8N205 uc_338.16-201ENST00000621804 95 ntBASIC1.16□□□□□ -2.22
SYNE4Q8N205 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE4Q8N205 RNU6-1229P-201ENST00000364295 107 ntBASIC1.15□□□□□ -2.23
SYNE4Q8N205 RNU6-1335P-201ENST00000365426 107 ntBASIC1.15□□□□□ -2.23
SYNE4Q8N205 snoU13.17-201ENST00000458802 104 ntBASIC1.15□□□□□ -2.23
SYNE4Q8N205 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
SYNE4Q8N205 MIR3140-201ENST00000583685 90 ntBASIC1.15□□□□□ -2.23
SYNE4Q8N205 MIR1-1-201ENST00000362147 71 ntBASIC1.14□□□□□ -2.23
SYNE4Q8N205 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
SYNE4Q8N205 RNU1-119P-201ENST00000391122 165 ntBASIC1.14□□□□□ -2.23
SYNE4Q8N205 AC138907.6-201ENST00000568401 126 ntBASIC1.14□□□□□ -2.23
SYNE4Q8N205 AC138869.1-201ENST00000568623 124 ntBASIC1.14□□□□□ -2.23
SYNE4Q8N205 MTRNR2L2-201ENST00000604882 87 ntBASIC1.14□□□□□ -2.23
SYNE4Q8N205 RNU7-10P-201ENST00000607194 63 ntBASIC1.14□□□□□ -2.23
SYNE4Q8N205 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE4Q8N205 Y_RNA.258-201ENST00000364613 105 ntBASIC1.13□□□□□ -2.23
SYNE4Q8N205 MIR520H-201ENST00000385126 88 ntBASIC1.13□□□□□ -2.23
SYNE4Q8N205 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.13□□□□□ -2.23
SYNE4Q8N205 AC244505.6-201ENST00000452829 130 ntBASIC1.13□□□□□ -2.23
SYNE4Q8N205 MIR924-201ENST00000638017 53 ntBASIC1.13□□□□□ -2.23
SYNE4Q8N205 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SYNE4Q8N205 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
SYNE4Q8N205 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
SYNE4Q8N205 MIRLET7A1-201ENST00000362295 80 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 RNU6-664P-201ENST00000362381 107 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 RNU6-315P-201ENST00000362666 107 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 RNU6-776P-201ENST00000364403 104 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 RNU6-1022P-201ENST00000365049 104 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 SNORD101-201ENST00000384027 73 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 MIR548U-201ENST00000390728 81 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 SNORD89-201ENST00000390981 114 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 SCARNA18B-201ENST00000458806 135 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 AL109933.3-201ENST00000619095 188 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 MIR6513-201ENST00000621188 64 ntBASIC1.12□□□□□ -2.23
SYNE4Q8N205 RNU7-161P-201ENST00000517289 62 ntBASIC1.11□□□□□ -2.23
SYNE4Q8N205 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SYNE4Q8N205 SNORD114-23-201ENST00000363536 72 ntBASIC1.1□□□□□ -2.23
SYNE4Q8N205 RNU6-1051P-201ENST00000365471 102 ntBASIC1.1□□□□□ -2.23
SYNE4Q8N205 MIR644A-201ENST00000385262 94 ntBASIC1.1□□□□□ -2.23
SYNE4Q8N205 MIR936-201ENST00000401264 98 ntBASIC1.1□□□□□ -2.23
SYNE4Q8N205 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.1□□□□□ -2.23
SYNE4Q8N205 RNU6-557P-201ENST00000516842 110 ntBASIC1.1□□□□□ -2.23
SYNE4Q8N205 MIR548AG2-201ENST00000581228 64 ntBASIC1.1□□□□□ -2.23
SYNE4Q8N205 AL136317.1-201ENST00000612653 226 ntBASIC1.1□□□□□ -2.23
SYNE4Q8N205 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
SYNE4Q8N205 Y_RNA.207-201ENST00000364142 106 ntBASIC1.09□□□□□ -2.23
SYNE4Q8N205 RNU6-1052P-201ENST00000411398 104 ntBASIC1.09□□□□□ -2.23
SYNE4Q8N205 RNU6-719P-201ENST00000516671 104 ntBASIC1.09□□□□□ -2.23
SYNE4Q8N205 MIR4484-201ENST00000582855 83 ntBASIC1.09□□□□□ -2.23
SYNE4Q8N205 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.09□□□□□ -2.23
SYNE4Q8N205 RNA5SP257-201ENST00000363023 116 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 SNORD115-24-201ENST00000363528 82 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 RNU6-686P-201ENST00000364839 107 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 MIR942-201ENST00000401111 86 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 Y_RNA.596-201ENST00000410462 109 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 MIR2113-201ENST00000459007 91 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 AC002350.1-201ENST00000490759 375 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 AC010487.4-201ENST00000637027 61 ntBASIC1.08□□□□□ -2.24
SYNE4Q8N205 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
SYNE4Q8N205 RNA5SP403-201ENST00000363598 108 ntBASIC1.07□□□□□ -2.24
SYNE4Q8N205 Y_RNA.239-201ENST00000364444 113 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms