Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
MMP13P45452 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
MMP13P45452 SNORA63.2-201ENST00000362603 126 ntBASIC0.89□□□□□ -2.27
MMP13P45452 SNORD115-24-201ENST00000363528 82 ntBASIC0.89□□□□□ -2.27
MMP13P45452 Y_RNA.207-201ENST00000364142 106 ntBASIC0.89□□□□□ -2.27
MMP13P45452 Y_RNA.244-201ENST00000364484 109 ntBASIC0.89□□□□□ -2.27
MMP13P45452 SNORD101-201ENST00000384027 73 ntBASIC0.89□□□□□ -2.27
MMP13P45452 RNA5SP255-201ENST00000516370 107 ntBASIC0.89□□□□□ -2.27
MMP13P45452 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.89□□□□□ -2.27
MMP13P45452 RNU6-161P-201ENST00000363051 106 ntBASIC0.88□□□□□ -2.27
MMP13P45452 Y_RNA.164-201ENST00000363709 102 ntBASIC0.88□□□□□ -2.27
MMP13P45452 SNORD115-37-201ENST00000363768 82 ntBASIC0.88□□□□□ -2.27
MMP13P45452 MIR573-201ENST00000384964 99 ntBASIC0.88□□□□□ -2.27
MMP13P45452 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
MMP13P45452 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.88□□□□□ -2.27
MMP13P45452 RNU6-1108P-201ENST00000516308 104 ntBASIC0.88□□□□□ -2.27
MMP13P45452 Y_RNA.788-201ENST00000622394 112 ntBASIC0.88□□□□□ -2.27
MMP13P45452 Y_RNA.596-201ENST00000410462 109 ntBASIC0.87□□□□□ -2.27
MMP13P45452 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
MMP13P45452 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
MMP13P45452 RNU6-287P-201ENST00000516230 98 ntBASIC0.87□□□□□ -2.27
MMP13P45452 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
MMP13P45452 MIR3612-201ENST00000579753 87 ntBASIC0.87□□□□□ -2.27
MMP13P45452 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
MMP13P45452 MIR3920-201ENST00000581751 86 ntBASIC0.87□□□□□ -2.27
MMP13P45452 MIR8070-201ENST00000616510 88 ntBASIC0.87□□□□□ -2.27
MMP13P45452 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
MMP13P45452 SNORD18A-201ENST00000363753 72 ntBASIC0.86□□□□□ -2.27
MMP13P45452 Y_RNA.174-201ENST00000363781 105 ntBASIC0.86□□□□□ -2.27
MMP13P45452 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
MMP13P45452 RNU6-1051P-201ENST00000365471 102 ntBASIC0.86□□□□□ -2.27
MMP13P45452 SNORA24B-201ENST00000384176 131 ntBASIC0.86□□□□□ -2.27
MMP13P45452 MIR548U-201ENST00000390728 81 ntBASIC0.86□□□□□ -2.27
MMP13P45452 RNU6-129P-201ENST00000391022 107 ntBASIC0.86□□□□□ -2.27
MMP13P45452 SNORD99-201ENST00000408612 74 ntBASIC0.86□□□□□ -2.27
MMP13P45452 MIR1276-201ENST00000408707 83 ntBASIC0.86□□□□□ -2.27
MMP13P45452 RNU6-1052P-201ENST00000411398 104 ntBASIC0.86□□□□□ -2.27
MMP13P45452 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
MMP13P45452 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
MMP13P45452 Y_RNA.676-201ENST00000516393 96 ntBASIC0.86□□□□□ -2.27
MMP13P45452 RNU6-719P-201ENST00000516671 104 ntBASIC0.86□□□□□ -2.27
MMP13P45452 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.86□□□□□ -2.27
MMP13P45452 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
MMP13P45452 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
MMP13P45452 SNORD28-201ENST00000384706 75 ntBASIC0.85□□□□□ -2.27
MMP13P45452 RNU7-104P-201ENST00000459398 79 ntBASIC0.85□□□□□ -2.27
MMP13P45452 MIR3678-201ENST00000578455 94 ntBASIC0.85□□□□□ -2.27
MMP13P45452 AC244669.1-204ENST00000621564 178 ntBASIC0.85□□□□□ -2.27
MMP13P45452 MIRLET7A1-201ENST00000362295 80 ntBASIC0.84□□□□□ -2.27
MMP13P45452 Y_RNA.239-201ENST00000364444 113 ntBASIC0.84□□□□□ -2.27
MMP13P45452 RNY1P8-201ENST00000383970 114 ntBASIC0.84□□□□□ -2.27
MMP13P45452 RNU6-1126P-201ENST00000384002 107 ntBASIC0.84□□□□□ -2.27
MMP13P45452 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
MMP13P45452 MIR2113-201ENST00000459007 91 ntBASIC0.84□□□□□ -2.27
MMP13P45452 RNU6-557P-201ENST00000516842 110 ntBASIC0.84□□□□□ -2.27
MMP13P45452 RNA5SP117-201ENST00000365294 118 ntBASIC0.83□□□□□ -2.28
MMP13P45452 RNU6-24P-201ENST00000384440 107 ntBASIC0.83□□□□□ -2.28
MMP13P45452 MIR451A-201ENST00000385059 72 ntBASIC0.83□□□□□ -2.28
MMP13P45452 MIR889-201ENST00000401280 79 ntBASIC0.83□□□□□ -2.28
MMP13P45452 RNU6-935P-201ENST00000410371 100 ntBASIC0.83□□□□□ -2.28
MMP13P45452 SCARNA18B-201ENST00000458806 135 ntBASIC0.83□□□□□ -2.28
MMP13P45452 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
MMP13P45452 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
MMP13P45452 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
MMP13P45452 RNU6-315P-201ENST00000362666 107 ntBASIC0.82□□□□□ -2.28
MMP13P45452 SNORA36.1-201ENST00000363424 132 ntBASIC0.82□□□□□ -2.28
MMP13P45452 RNU6-1229P-201ENST00000364295 107 ntBASIC0.82□□□□□ -2.28
MMP13P45452 Y_RNA.258-201ENST00000364613 105 ntBASIC0.82□□□□□ -2.28
MMP13P45452 FGF7P7-201ENST00000514120 227 ntBASIC0.82□□□□□ -2.28
MMP13P45452 RNA5SP47-201ENST00000517230 109 ntBASIC0.82□□□□□ -2.28
MMP13P45452 MIR18A-201ENST00000362310 71 ntBASIC0.81□□□□□ -2.28
MMP13P45452 SNORA25.9-201ENST00000365087 128 ntBASIC0.81□□□□□ -2.28
MMP13P45452 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
MMP13P45452 RNU7-13P-201ENST00000516413 62 ntBASIC0.81□□□□□ -2.28
MMP13P45452 MIR6504-201ENST00000613520 61 ntBASIC0.81□□□□□ -2.28
MMP13P45452 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.81□□□□□ -2.28
MMP13P45452 RNU6-208P-201ENST00000362431 107 ntBASIC0.8□□□□□ -2.28
MMP13P45452 RNU6-824P-201ENST00000363724 104 ntBASIC0.8□□□□□ -2.28
MMP13P45452 RNU6-726P-201ENST00000364680 107 ntBASIC0.8□□□□□ -2.28
MMP13P45452 RNU6-686P-201ENST00000364839 107 ntBASIC0.8□□□□□ -2.28
MMP13P45452 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
MMP13P45452 MIR519E-201ENST00000385075 84 ntBASIC0.8□□□□□ -2.28
MMP13P45452 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
MMP13P45452 MIR4639-201ENST00000584938 69 ntBASIC0.8□□□□□ -2.28
MMP13P45452 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
MMP13P45452 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
MMP13P45452 SNORD41.1-201ENST00000391000 69 ntBASIC0.79□□□□□ -2.28
MMP13P45452 SNORD77.2-201ENST00000391045 68 ntBASIC0.79□□□□□ -2.28
MMP13P45452 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
MMP13P45452 AC025627.3-201ENST00000582078 182 ntBASIC0.79□□□□□ -2.28
MMP13P45452 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
MMP13P45452 RNU6-716P-201ENST00000365621 103 ntBASIC0.78□□□□□ -2.28
MMP13P45452 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
MMP13P45452 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
MMP13P45452 MIR4484-201ENST00000582855 83 ntBASIC0.78□□□□□ -2.28
MMP13P45452 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
MMP13P45452 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
MMP13P45452 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.78□□□□□ -2.28
MMP13P45452 RNU6-330P-201ENST00000363015 107 ntBASIC0.77□□□□□ -2.29
MMP13P45452 SNORD115-44-201ENST00000365391 82 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms