Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 MIR3678-201ENST00000578455 94 ntBASIC0.82□□□□□ -2.28
RHOP08100 Y_RNA.221-201ENST00000364248 96 ntBASIC0.81□□□□□ -2.28
RHOP08100 SNORD115-44-201ENST00000365391 82 ntBASIC0.81□□□□□ -2.28
RHOP08100 MIR450A2-201ENST00000385022 100 ntBASIC0.81□□□□□ -2.28
RHOP08100 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
RHOP08100 RNU6-762P-201ENST00000517107 102 ntBASIC0.81□□□□□ -2.28
RHOP08100 RNA5SP47-201ENST00000517230 109 ntBASIC0.81□□□□□ -2.28
RHOP08100 RNU6-509P-201ENST00000363519 107 ntBASIC0.8□□□□□ -2.28
RHOP08100 RNU6-1229P-201ENST00000364295 107 ntBASIC0.8□□□□□ -2.28
RHOP08100 SNORD73B-201ENST00000364394 72 ntBASIC0.8□□□□□ -2.28
RHOP08100 Y_RNA.596-201ENST00000410462 109 ntBASIC0.8□□□□□ -2.28
RHOP08100 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
RHOP08100 U6.100-201ENST00000636230 99 ntBASIC0.8□□□□□ -2.28
RHOP08100 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
RHOP08100 RNU6-811P-201ENST00000384069 107 ntBASIC0.79□□□□□ -2.28
RHOP08100 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
RHOP08100 SCARNA16.5-201ENST00000517114 183 ntBASIC0.79□□□□□ -2.28
RHOP08100 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
RHOP08100 AC244669.1-204ENST00000621564 178 ntBASIC0.79□□□□□ -2.28
RHOP08100 MIR6828-201ENST00000636181 60 ntBASIC0.79□□□□□ -2.28
RHOP08100 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
RHOP08100 RNU6-820P-201ENST00000384273 107 ntBASIC0.78□□□□□ -2.28
RHOP08100 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
RHOP08100 MIR548U-201ENST00000390728 81 ntBASIC0.78□□□□□ -2.28
RHOP08100 RNA5SP222-201ENST00000411039 105 ntBASIC0.78□□□□□ -2.28
RHOP08100 RNU6-267P-201ENST00000516714 103 ntBASIC0.78□□□□□ -2.28
RHOP08100 MIR3064-201ENST00000581130 66 ntBASIC0.78□□□□□ -2.28
RHOP08100 AC104996.3-201ENST00000590718 94 ntBASIC0.78□□□□□ -2.28
RHOP08100 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
RHOP08100 SNORD115-27-201ENST00000364430 82 ntBASIC0.77□□□□□ -2.29
RHOP08100 SNORD101-201ENST00000384027 73 ntBASIC0.77□□□□□ -2.29
RHOP08100 MIR519C-201ENST00000385053 87 ntBASIC0.77□□□□□ -2.29
RHOP08100 MIR1236-201ENST00000408340 102 ntBASIC0.77□□□□□ -2.29
RHOP08100 RNU7-104P-201ENST00000459398 79 ntBASIC0.77□□□□□ -2.29
RHOP08100 RN7SKP12-201ENST00000516275 143 ntBASIC0.77□□□□□ -2.29
RHOP08100 RNU7-13P-201ENST00000516413 62 ntBASIC0.77□□□□□ -2.29
RHOP08100 MIR4696-201ENST00000581431 70 ntBASIC0.77□□□□□ -2.29
RHOP08100 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.77□□□□□ -2.29
RHOP08100 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
RHOP08100 RNU6-664P-201ENST00000362381 107 ntBASIC0.76□□□□□ -2.29
RHOP08100 RNU6-132P-201ENST00000383863 107 ntBASIC0.76□□□□□ -2.29
RHOP08100 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
RHOP08100 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
RHOP08100 SNORD41.1-201ENST00000391000 69 ntBASIC0.76□□□□□ -2.29
RHOP08100 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.76□□□□□ -2.29
RHOP08100 RNA5SP94-201ENST00000516917 108 ntBASIC0.76□□□□□ -2.29
RHOP08100 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.76□□□□□ -2.29
RHOP08100 MIR3920-201ENST00000581751 86 ntBASIC0.76□□□□□ -2.29
RHOP08100 AC062037.1-201ENST00000605302 128 ntBASIC0.76□□□□□ -2.29
RHOP08100 AC067863.3-201ENST00000624172 122 ntBASIC0.76□□□□□ -2.29
RHOP08100 RNU4-32P-201ENST00000363404 141 ntBASIC0.75□□□□□ -2.29
RHOP08100 RNY1P1-201ENST00000364372 112 ntBASIC0.75□□□□□ -2.29
RHOP08100 RNY1P8-201ENST00000383970 114 ntBASIC0.75□□□□□ -2.29
RHOP08100 IGLL4P-201ENST00000614590 133 ntBASIC0.75□□□□□ -2.29
RHOP08100 RNU6-726P-201ENST00000364680 107 ntBASIC0.74□□□□□ -2.29
RHOP08100 RNU6-1126P-201ENST00000384002 107 ntBASIC0.74□□□□□ -2.29
RHOP08100 MIR193B-201ENST00000384907 83 ntBASIC0.74□□□□□ -2.29
RHOP08100 MIR140-201ENST00000385282 100 ntBASIC0.74□□□□□ -2.29
RHOP08100 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
RHOP08100 RNU6-935P-201ENST00000410371 100 ntBASIC0.74□□□□□ -2.29
RHOP08100 RNY4P29-201ENST00000410801 97 ntBASIC0.74□□□□□ -2.29
RHOP08100 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
RHOP08100 MIR548BB-201ENST00000626714 66 ntBASIC0.74□□□□□ -2.29
RHOP08100 MIRLET7F1-201ENST00000362202 87 ntBASIC0.73□□□□□ -2.29
RHOP08100 SNORA36.1-201ENST00000363424 132 ntBASIC0.73□□□□□ -2.29
RHOP08100 Y_RNA.207-201ENST00000364142 106 ntBASIC0.73□□□□□ -2.29
RHOP08100 Y_RNA.239-201ENST00000364444 113 ntBASIC0.73□□□□□ -2.29
RHOP08100 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
RHOP08100 Y_RNA.491-201ENST00000384417 107 ntBASIC0.73□□□□□ -2.29
RHOP08100 RNU6-1152P-201ENST00000384576 107 ntBASIC0.73□□□□□ -2.29
RHOP08100 SNORA26.2-201ENST00000390922 122 ntBASIC0.73□□□□□ -2.29
RHOP08100 RNA5SP292-201ENST00000390974 118 ntBASIC0.73□□□□□ -2.29
RHOP08100 MIR5588-201ENST00000581890 63 ntBASIC0.73□□□□□ -2.29
RHOP08100 MIR494-201ENST00000349529 81 ntBASIC0.72□□□□□ -2.29
RHOP08100 Y_RNA.73-201ENST00000362910 113 ntBASIC0.72□□□□□ -2.29
RHOP08100 RNU6-979P-201ENST00000383896 107 ntBASIC0.72□□□□□ -2.29
RHOP08100 MIR548AG2-201ENST00000581228 64 ntBASIC0.72□□□□□ -2.29
RHOP08100 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.72□□□□□ -2.29
RHOP08100 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
RHOP08100 MIR617-201ENST00000385030 97 ntBASIC0.71□□□□□ -2.3
RHOP08100 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RHOP08100 MIR936-201ENST00000401264 98 ntBASIC0.71□□□□□ -2.3
RHOP08100 RNU7-74P-201ENST00000459104 62 ntBASIC0.71□□□□□ -2.3
RHOP08100 AC022137.1-201ENST00000483735 151 ntBASIC0.71□□□□□ -2.3
RHOP08100 AC093729.1-201ENST00000513074 128 ntBASIC0.71□□□□□ -2.3
RHOP08100 RNU6-287P-201ENST00000516230 98 ntBASIC0.71□□□□□ -2.3
RHOP08100 SNORA18.5-201ENST00000516616 101 ntBASIC0.71□□□□□ -2.3
RHOP08100 MIR1273G-201ENST00000577677 100 ntBASIC0.71□□□□□ -2.3
RHOP08100 MIR4796-201ENST00000580742 81 ntBASIC0.71□□□□□ -2.3
RHOP08100 AC006160.2-201ENST00000637708 154 ntBASIC0.71□□□□□ -2.3
RHOP08100 SNORD115-37-201ENST00000363768 82 ntBASIC0.7□□□□□ -2.3
RHOP08100 Y_RNA.426-201ENST00000384068 113 ntBASIC0.7□□□□□ -2.3
RHOP08100 Y_RNA.611-201ENST00000410682 108 ntBASIC0.7□□□□□ -2.3
RHOP08100 MIR2113-201ENST00000459007 91 ntBASIC0.7□□□□□ -2.3
RHOP08100 SNORA72.7-201ENST00000516349 94 ntBASIC0.7□□□□□ -2.3
RHOP08100 RNA5SP268-201ENST00000516828 124 ntBASIC0.7□□□□□ -2.3
RHOP08100 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
RHOP08100 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
RHOP08100 SNORA8.2-201ENST00000384372 139 ntBASIC0.69□□□□□ -2.3
RHOP08100 RNU7-171P-201ENST00000459581 62 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms