Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU6-448P-201ENST00000517052 107 ntBASIC1.05□□□□□ -2.24
NR2E3Q9Y5X4 MIR2052-201ENST00000636055 55 ntBASIC1.05□□□□□ -2.24
NR2E3Q9Y5X4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
NR2E3Q9Y5X4 RNA5SP245-201ENST00000364239 121 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-1131P-201ENST00000364955 107 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-291P-201ENST00000384720 107 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 RNU1-119P-201ENST00000391122 165 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-887P-201ENST00000410660 100 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 TRAJ51-201ENST00000504127 63 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-162P-201ENST00000516228 103 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 Y_RNA.705-201ENST00000516862 110 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 AC025521.1-201ENST00000621624 286 ntBASIC1.04□□□□□ -2.24
NR2E3Q9Y5X4 MIR330-201ENST00000362196 94 ntBASIC1.03□□□□□ -2.24
NR2E3Q9Y5X4 Y_RNA.43-201ENST00000362670 111 ntBASIC1.03□□□□□ -2.24
NR2E3Q9Y5X4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.03□□□□□ -2.24
NR2E3Q9Y5X4 SNORD58A-201ENST00000383875 65 ntBASIC1.03□□□□□ -2.24
NR2E3Q9Y5X4 RNY4P30-201ENST00000410216 95 ntBASIC1.03□□□□□ -2.24
NR2E3Q9Y5X4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
NR2E3Q9Y5X4 AC138907.6-201ENST00000568401 126 ntBASIC1.03□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-1255P-201ENST00000363434 112 ntBASIC1.02□□□□□ -2.25
NR2E3Q9Y5X4 Y_RNA.190-201ENST00000363964 101 ntBASIC1.02□□□□□ -2.25
NR2E3Q9Y5X4 Y_RNA.369-201ENST00000365568 117 ntBASIC1.02□□□□□ -2.25
NR2E3Q9Y5X4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.02□□□□□ -2.25
NR2E3Q9Y5X4 RNU6-972P-201ENST00000391208 107 ntBASIC1.02□□□□□ -2.25
NR2E3Q9Y5X4 AP003327.1-201ENST00000529684 127 ntBASIC1.02□□□□□ -2.25
NR2E3Q9Y5X4 AL513043.2-201ENST00000573941 143 ntBASIC1.02□□□□□ -2.25
NR2E3Q9Y5X4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.02□□□□□ -2.25
NR2E3Q9Y5X4 SNORD36A-201ENST00000362874 73 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 RNU6-35P-201ENST00000384530 107 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 MIR516A2-201ENST00000384888 90 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 MIR516A1-201ENST00000385033 90 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 MIR520H-201ENST00000385126 88 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 SNORD63B-201ENST00000411005 70 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 AC092628.1-201ENST00000436250 252 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 MIR4698-201ENST00000577795 80 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 uc_338.16-201ENST00000621804 95 ntBASIC1.01□□□□□ -2.25
NR2E3Q9Y5X4 Y_RNA.57-201ENST00000362806 113 ntBASIC1□□□□□ -2.25
NR2E3Q9Y5X4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1□□□□□ -2.25
NR2E3Q9Y5X4 MIR519A1-201ENST00000385257 85 ntBASIC1□□□□□ -2.25
NR2E3Q9Y5X4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.99□□□□□ -2.25
NR2E3Q9Y5X4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
NR2E3Q9Y5X4 RNU6-844P-201ENST00000517175 102 ntBASIC0.99□□□□□ -2.25
NR2E3Q9Y5X4 AL353765.1-201ENST00000605514 183 ntBASIC0.99□□□□□ -2.25
NR2E3Q9Y5X4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
NR2E3Q9Y5X4 MIR101-2-201ENST00000362195 79 ntBASIC0.98□□□□□ -2.25
NR2E3Q9Y5X4 RNU6-1125P-201ENST00000363601 107 ntBASIC0.98□□□□□ -2.25
NR2E3Q9Y5X4 RNU6-480P-201ENST00000384332 107 ntBASIC0.98□□□□□ -2.25
NR2E3Q9Y5X4 RNU6-535P-201ENST00000384722 107 ntBASIC0.98□□□□□ -2.25
NR2E3Q9Y5X4 SNORD99-201ENST00000408612 74 ntBASIC0.98□□□□□ -2.25
NR2E3Q9Y5X4 AC002350.1-201ENST00000490759 375 ntBASIC0.98□□□□□ -2.25
NR2E3Q9Y5X4 SNORA31.14-201ENST00000516728 116 ntBASIC0.98□□□□□ -2.25
NR2E3Q9Y5X4 MIR548H5-201ENST00000580314 60 ntBASIC0.98□□□□□ -2.25
NR2E3Q9Y5X4 Y_RNA.96-201ENST00000363092 109 ntBASIC0.97□□□□□ -2.25
NR2E3Q9Y5X4 MIR635-201ENST00000384830 98 ntBASIC0.97□□□□□ -2.25
NR2E3Q9Y5X4 RNU7-195P-201ENST00000458793 62 ntBASIC0.97□□□□□ -2.25
NR2E3Q9Y5X4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.97□□□□□ -2.25
NR2E3Q9Y5X4 SNORD116-10-201ENST00000363791 102 ntBASIC0.96□□□□□ -2.26
NR2E3Q9Y5X4 MIR608-201ENST00000384820 100 ntBASIC0.96□□□□□ -2.26
NR2E3Q9Y5X4 MIR573-201ENST00000384964 99 ntBASIC0.96□□□□□ -2.26
NR2E3Q9Y5X4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.96□□□□□ -2.26
NR2E3Q9Y5X4 AC244505.6-201ENST00000452829 130 ntBASIC0.96□□□□□ -2.26
NR2E3Q9Y5X4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.96□□□□□ -2.26
NR2E3Q9Y5X4 Y_RNA.220-201ENST00000364244 109 ntBASIC0.95□□□□□ -2.26
NR2E3Q9Y5X4 MIR1197-201ENST00000408818 88 ntBASIC0.95□□□□□ -2.26
NR2E3Q9Y5X4 RNU7-85P-201ENST00000458851 63 ntBASIC0.95□□□□□ -2.26
NR2E3Q9Y5X4 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
NR2E3Q9Y5X4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.94□□□□□ -2.26
NR2E3Q9Y5X4 AC244098.3-201ENST00000424803 96 ntBASIC0.94□□□□□ -2.26
NR2E3Q9Y5X4 snoU13.11-201ENST00000459219 104 ntBASIC0.94□□□□□ -2.26
NR2E3Q9Y5X4 AC026421.1-201ENST00000519101 163 ntBASIC0.94□□□□□ -2.26
NR2E3Q9Y5X4 AC011195.1-201ENST00000578177 177 ntBASIC0.94□□□□□ -2.26
NR2E3Q9Y5X4 RNU7-10P-201ENST00000607194 63 ntBASIC0.94□□□□□ -2.26
NR2E3Q9Y5X4 MIR6835-201ENST00000621552 64 ntBASIC0.94□□□□□ -2.26
NR2E3Q9Y5X4 MIR4679-1-201ENST00000637619 75 ntBASIC0.94□□□□□ -2.26
NR2E3Q9Y5X4 AL606490.4-201ENST00000423117 127 ntBASIC0.93□□□□□ -2.26
NR2E3Q9Y5X4 AC097635.1-201ENST00000450678 155 ntBASIC0.93□□□□□ -2.26
NR2E3Q9Y5X4 Y_RNA.648-201ENST00000459455 110 ntBASIC0.93□□□□□ -2.26
NR2E3Q9Y5X4 RNU6-75P-201ENST00000515944 104 ntBASIC0.93□□□□□ -2.26
NR2E3Q9Y5X4 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
NR2E3Q9Y5X4 AC138869.1-201ENST00000568623 124 ntBASIC0.93□□□□□ -2.26
NR2E3Q9Y5X4 MIR4711-201ENST00000578274 70 ntBASIC0.93□□□□□ -2.26
NR2E3Q9Y5X4 RNU6-294P-201ENST00000364999 102 ntBASIC0.92□□□□□ -2.26
NR2E3Q9Y5X4 RNU6-497P-201ENST00000365316 104 ntBASIC0.92□□□□□ -2.26
NR2E3Q9Y5X4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.92□□□□□ -2.26
NR2E3Q9Y5X4 MIR3612-201ENST00000579753 87 ntBASIC0.92□□□□□ -2.26
NR2E3Q9Y5X4 RNA5SP347-201ENST00000362445 119 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 RNU6-957P-201ENST00000363652 99 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 RNU6-219P-201ENST00000364728 107 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 MIR508-201ENST00000384857 115 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 MIR644A-201ENST00000385262 94 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 Y_RNA.593-201ENST00000410292 98 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 RNA5SP193-201ENST00000410353 107 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 AL161932.1-201ENST00000437408 146 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 SNORD4B-201ENST00000459083 72 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.91□□□□□ -2.26
NR2E3Q9Y5X4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.9□□□□□ -2.27
NR2E3Q9Y5X4 RNU4-45P-201ENST00000365469 141 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms