Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 RNU7-56P-201ENST00000458744 62 ntBASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 snoU13.17-201ENST00000458802 104 ntBASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.24□□□□□ -2.21
PARPBPQ9NWS1 MIRLET7A1-201ENST00000362295 80 ntBASIC1.23□□□□□ -2.21
PARPBPQ9NWS1 MIR100-201ENST00000385259 80 ntBASIC1.23□□□□□ -2.21
PARPBPQ9NWS1 SCARNA18B-201ENST00000458806 135 ntBASIC1.23□□□□□ -2.21
PARPBPQ9NWS1 RNU6-977P-201ENST00000516411 103 ntBASIC1.23□□□□□ -2.21
PARPBPQ9NWS1 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
PARPBPQ9NWS1 MIR4696-201ENST00000581431 70 ntBASIC1.23□□□□□ -2.21
PARPBPQ9NWS1 RNU7-10P-201ENST00000607194 63 ntBASIC1.23□□□□□ -2.21
PARPBPQ9NWS1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 MIR548U-201ENST00000390728 81 ntBASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 AC097635.1-201ENST00000450678 155 ntBASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 RNU6-557P-201ENST00000516842 110 ntBASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 MIR3140-201ENST00000583685 90 ntBASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 AC145423.2-201ENST00000610631 239 ntBASIC1.22□□□□□ -2.21
PARPBPQ9NWS1 RNU6-664P-201ENST00000362381 107 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 Y_RNA.32-201ENST00000362589 110 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 RNU6-686P-201ENST00000364839 107 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 Y_RNA.565-201ENST00000384719 101 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 MIR520F-201ENST00000384824 87 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 MIR520H-201ENST00000385126 88 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 RNU7-95P-201ENST00000459222 64 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 AC138907.6-201ENST00000568401 126 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 AC138869.1-201ENST00000568623 124 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 MIR4484-201ENST00000582855 83 ntBASIC1.21□□□□□ -2.22
PARPBPQ9NWS1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
PARPBPQ9NWS1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
PARPBPQ9NWS1 AP1B1P2-201ENST00000416196 106 ntBASIC1.2□□□□□ -2.22
PARPBPQ9NWS1 SNORA31.14-201ENST00000516728 116 ntBASIC1.2□□□□□ -2.22
PARPBPQ9NWS1 MIR3124-201ENST00000582636 67 ntBASIC1.2□□□□□ -2.22
PARPBPQ9NWS1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PARPBPQ9NWS1 MIR1-1-201ENST00000362147 71 ntBASIC1.19□□□□□ -2.22
PARPBPQ9NWS1 RNU6-1051P-201ENST00000365471 102 ntBASIC1.19□□□□□ -2.22
PARPBPQ9NWS1 SNORD101-201ENST00000384027 73 ntBASIC1.19□□□□□ -2.22
PARPBPQ9NWS1 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
PARPBPQ9NWS1 RNU1-119P-201ENST00000391122 165 ntBASIC1.19□□□□□ -2.22
PARPBPQ9NWS1 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
PARPBPQ9NWS1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.19□□□□□ -2.22
PARPBPQ9NWS1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.19□□□□□ -2.22
PARPBPQ9NWS1 RNU6-1094P-201ENST00000362416 104 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 MIR222-201ENST00000384992 110 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 MIR1827-201ENST00000408549 66 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 FGF7P7-201ENST00000514120 227 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 RNU6-719P-201ENST00000516671 104 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 MIR3134-201ENST00000579433 74 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 MTRNR2L2-201ENST00000604882 87 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 RMST_2.1-201ENST00000617263 136 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 uc_338.16-201ENST00000621804 95 ntBASIC1.18□□□□□ -2.22
PARPBPQ9NWS1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 RNU6-208P-201ENST00000362431 107 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 Y_RNA.239-201ENST00000364444 113 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 SNORA25-201ENST00000384384 134 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 SNORD77.2-201ENST00000391045 68 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 AC244505.6-201ENST00000452829 130 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 RNU6-523P-201ENST00000516304 54 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 U7.4-201ENST00000614961 63 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.17□□□□□ -2.22
PARPBPQ9NWS1 Y_RNA.207-201ENST00000364142 106 ntBASIC1.16□□□□□ -2.22
PARPBPQ9NWS1 Y_RNA.596-201ENST00000410462 109 ntBASIC1.16□□□□□ -2.22
PARPBPQ9NWS1 AL353770.2-201ENST00000620024 78 ntBASIC1.16□□□□□ -2.22
PARPBPQ9NWS1 MIR664A-201ENST00000626086 82 ntBASIC1.16□□□□□ -2.22
PARPBPQ9NWS1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
PARPBPQ9NWS1 RNA5SP432-201ENST00000362480 116 ntBASIC1.15□□□□□ -2.23
PARPBPQ9NWS1 SNORD89-201ENST00000390981 114 ntBASIC1.15□□□□□ -2.23
PARPBPQ9NWS1 snoU13.31-201ENST00000607291 104 ntBASIC1.15□□□□□ -2.23
PARPBPQ9NWS1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.15□□□□□ -2.23
PARPBPQ9NWS1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
PARPBPQ9NWS1 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
PARPBPQ9NWS1 SNORD12-201ENST00000391002 90 ntBASIC1.14□□□□□ -2.23
PARPBPQ9NWS1 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
PARPBPQ9NWS1 RNU6-287P-201ENST00000516230 98 ntBASIC1.14□□□□□ -2.23
PARPBPQ9NWS1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.14□□□□□ -2.23
PARPBPQ9NWS1 Y_RNA.12-201ENST00000362393 112 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 RNU6-330P-201ENST00000363015 107 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 SNORD115-24-201ENST00000363528 82 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 SNORA25.9-201ENST00000365087 128 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 MIR451A-201ENST00000385059 72 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 MIR644A-201ENST00000385262 94 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 SNORD124-201ENST00000459577 104 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 Y_RNA.660-201ENST00000516002 120 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 RNU7-161P-201ENST00000517289 62 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 MIR548AG2-201ENST00000581228 64 ntBASIC1.13□□□□□ -2.23
PARPBPQ9NWS1 AL136317.1-201ENST00000612653 226 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms