Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6-1241P-201ENST00000384536 107 ntBASIC1.9□□□□□ -2.11
ATG3Q9NT62 MIR18B-201ENST00000454574 71 ntBASIC1.9□□□□□ -2.11
ATG3Q9NT62 RNA5SP102-201ENST00000516865 106 ntBASIC1.9□□□□□ -2.11
ATG3Q9NT62 AL157834.3-201ENST00000615543 103 ntBASIC1.9□□□□□ -2.11
ATG3Q9NT62 TRDV1-202ENST00000621643 102 ntBASIC1.9□□□□□ -2.11
ATG3Q9NT62 Y_RNA.13-201ENST00000362403 112 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 Y_RNA.36-201ENST00000362602 112 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 RNU6-154P-201ENST00000384306 106 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 MIR519A1-201ENST00000385257 85 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 AC092628.1-201ENST00000436250 252 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 AC079140.2-201ENST00000506193 142 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 MIR4696-201ENST00000581431 70 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.89□□□□□ -2.11
ATG3Q9NT62 AL353770.2-201ENST00000620024 78 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 U6.100-201ENST00000636230 99 ntBASIC1.89□□□□□ -2.11
ATG3Q9NT62 Y_RNA.42-201ENST00000362660 108 ntBASIC1.88□□□□□ -2.11
ATG3Q9NT62 RNU6-291P-201ENST00000384720 107 ntBASIC1.88□□□□□ -2.11
ATG3Q9NT62 SNORD30.1-201ENST00000391309 70 ntBASIC1.88□□□□□ -2.11
ATG3Q9NT62 RNU6-1054P-201ENST00000411293 104 ntBASIC1.88□□□□□ -2.11
ATG3Q9NT62 RNU7-185P-201ENST00000459215 60 ntBASIC1.88□□□□□ -2.11
ATG3Q9NT62 Y_RNA.809-201ENST00000516058 95 ntBASIC1.88□□□□□ -2.11
ATG3Q9NT62 AC023934.1-201ENST00000574529 2389 ntBASIC1.88□□□□□ -2.11
ATG3Q9NT62 SNORD33-201ENST00000362761 85 ntBASIC1.87□□□□□ -2.11
ATG3Q9NT62 RNU6-340P-201ENST00000364005 107 ntBASIC1.87□□□□□ -2.11
ATG3Q9NT62 Y_RNA.371-201ENST00000365591 113 ntBASIC1.87□□□□□ -2.11
ATG3Q9NT62 MIR942-201ENST00000401111 86 ntBASIC1.87□□□□□ -2.11
ATG3Q9NT62 MIR1304-201ENST00000408243 91 ntBASIC1.87□□□□□ -2.11
ATG3Q9NT62 U6.111-201ENST00000636093 83 ntBASIC1.87□□□□□ -2.11
ATG3Q9NT62 MIR101-2-201ENST00000362195 79 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 RNU6-664P-201ENST00000362381 107 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 RNU6-1260P-201ENST00000362944 107 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 Y_RNA.205-201ENST00000364128 113 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 SNORA8.1-201ENST00000384250 140 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 RNU6-800P-201ENST00000384473 103 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 SNORD83.1-201ENST00000411362 77 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 Y_RNA.697-201ENST00000516776 113 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 AC019176.1-201ENST00000518519 225 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 MIR6082-201ENST00000613604 109 ntBASIC1.86□□□□□ -2.11
ATG3Q9NT62 Y_RNA.239-201ENST00000364444 113 ntBASIC1.85□□□□□ -2.11
ATG3Q9NT62 RNU7-156P-201ENST00000517214 74 ntBASIC1.85□□□□□ -2.11
ATG3Q9NT62 MIR548H5-201ENST00000580314 60 ntBASIC1.85□□□□□ -2.11
ATG3Q9NT62 Y_RNA.56-201ENST00000362798 112 ntBASIC1.84□□□□□ -2.11
ATG3Q9NT62 MIR154-201ENST00000385243 84 ntBASIC1.84□□□□□ -2.11
ATG3Q9NT62 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
ATG3Q9NT62 RNU2-59P-201ENST00000410482 191 ntBASIC1.84□□□□□ -2.11
ATG3Q9NT62 RNU6-165P-201ENST00000517170 99 ntBASIC1.84□□□□□ -2.11
ATG3Q9NT62 MIR3937-201ENST00000580135 106 ntBASIC1.84□□□□□ -2.11
ATG3Q9NT62 MTRNR2L2-201ENST00000604882 87 ntBASIC1.84□□□□□ -2.11
ATG3Q9NT62 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.84□□□□□ -2.11
ATG3Q9NT62 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ATG3Q9NT62 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ATG3Q9NT62 RNA5SP245-201ENST00000364239 121 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 SNORD114-22-201ENST00000365423 72 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 SNORD101-201ENST00000384027 73 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 SNORA24B-201ENST00000384176 131 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 RNU6-663P-201ENST00000391105 106 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 RNU6-1052P-201ENST00000411398 104 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 snoU13.18-201ENST00000459483 104 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 RNU6-719P-201ENST00000516671 104 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 RNU6-902P-201ENST00000517212 91 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 MIR4452-201ENST00000583004 71 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.83□□□□□ -2.12
ATG3Q9NT62 MIR96-201ENST00000362288 78 ntBASIC1.82□□□□□ -2.12
ATG3Q9NT62 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.82□□□□□ -2.12
ATG3Q9NT62 RNU6-824P-201ENST00000363724 104 ntBASIC1.81□□□□□ -2.12
ATG3Q9NT62 RNU6-1065P-201ENST00000384513 106 ntBASIC1.81□□□□□ -2.12
ATG3Q9NT62 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ATG3Q9NT62 MIR1257-201ENST00000408490 117 ntBASIC1.81□□□□□ -2.12
ATG3Q9NT62 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.81□□□□□ -2.12
ATG3Q9NT62 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ATG3Q9NT62 Y_RNA.606-201ENST00000410579 103 ntBASIC1.8□□□□□ -2.12
ATG3Q9NT62 RNU7-10P-201ENST00000607194 63 ntBASIC1.8□□□□□ -2.12
ATG3Q9NT62 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
ATG3Q9NT62 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ATG3Q9NT62 RNU6-934P-201ENST00000365154 107 ntBASIC1.79□□□□□ -2.12
ATG3Q9NT62 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ATG3Q9NT62 SNORD45A-201ENST00000384512 84 ntBASIC1.79□□□□□ -2.12
ATG3Q9NT62 RNU6-997P-201ENST00000384725 107 ntBASIC1.79□□□□□ -2.12
ATG3Q9NT62 MIR599-201ENST00000385069 95 ntBASIC1.79□□□□□ -2.12
ATG3Q9NT62 AC036111.3-201ENST00000526389 112 ntBASIC1.79□□□□□ -2.12
ATG3Q9NT62 AC005520.4-201ENST00000604337 90 ntBASIC1.79□□□□□ -2.12
ATG3Q9NT62 MIR125B2-201ENST00000385128 89 ntBASIC1.78□□□□□ -2.12
ATG3Q9NT62 MIR320A-201ENST00000385302 82 ntBASIC1.78□□□□□ -2.12
ATG3Q9NT62 AC097635.1-201ENST00000450678 155 ntBASIC1.78□□□□□ -2.12
ATG3Q9NT62 RNU6-1265P-201ENST00000516342 103 ntBASIC1.78□□□□□ -2.12
ATG3Q9NT62 RNU6-765P-201ENST00000516916 99 ntBASIC1.78□□□□□ -2.12
ATG3Q9NT62 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
ATG3Q9NT62 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ATG3Q9NT62 RNU6-471P-201ENST00000383944 106 ntBASIC1.77□□□□□ -2.13
ATG3Q9NT62 AC048334.1-201ENST00000477975 159 ntBASIC1.77□□□□□ -2.13
ATG3Q9NT62 AC097510.1-201ENST00000510945 133 ntBASIC1.77□□□□□ -2.13
ATG3Q9NT62 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.77□□□□□ -2.13
ATG3Q9NT62 MIR4771-2-201ENST00000577758 74 ntBASIC1.77□□□□□ -2.13
ATG3Q9NT62 MIR4771-1-201ENST00000582617 74 ntBASIC1.77□□□□□ -2.13
ATG3Q9NT62 MIR3675-201ENST00000583661 73 ntBASIC1.77□□□□□ -2.13
ATG3Q9NT62 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ATG3Q9NT62 U6.81-201ENST00000612550 106 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 299.8 ms