Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC023934.1-201ENST00000574529 2389 ntBASIC1.48□□□□□ -2.17
VPS11Q9H270 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS11Q9H270 RNU6-664P-201ENST00000362381 107 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 RNU1-17P-201ENST00000363022 152 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 RNU6-824P-201ENST00000363724 104 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 MIR154-201ENST00000385243 84 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS11Q9H270 RNU6-482P-201ENST00000391068 107 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 SNORD83.1-201ENST00000411362 77 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 SNORA31.2-201ENST00000516019 134 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS11Q9H270 AC005520.4-201ENST00000604337 90 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 MIR6082-201ENST00000613604 109 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.47□□□□□ -2.17
VPS11Q9H270 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS11Q9H270 MIR337-201ENST00000362281 93 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 RNA5SP327-201ENST00000362494 101 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 Y_RNA.239-201ENST00000364444 113 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 RNU6-471P-201ENST00000383944 106 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 SNORD101-201ENST00000384027 73 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
VPS11Q9H270 AC048334.1-201ENST00000477975 159 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 RNU6-1265P-201ENST00000516342 103 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 Y_RNA.697-201ENST00000516776 113 ntBASIC1.46□□□□□ -2.18
VPS11Q9H270 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
VPS11Q9H270 MIR101-2-201ENST00000362195 79 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 Y_RNA.56-201ENST00000362798 112 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 RNA5SP190-201ENST00000365222 118 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 Y_RNA.606-201ENST00000410579 103 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 MIR548H5-201ENST00000580314 60 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.45□□□□□ -2.18
VPS11Q9H270 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VPS11Q9H270 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
VPS11Q9H270 RNA5SP245-201ENST00000364239 121 ntBASIC1.44□□□□□ -2.18
VPS11Q9H270 SNORD45A-201ENST00000384512 84 ntBASIC1.44□□□□□ -2.18
VPS11Q9H270 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
VPS11Q9H270 SNORA67.6-201ENST00000391093 99 ntBASIC1.44□□□□□ -2.18
VPS11Q9H270 SNORD13-201ENST00000459299 104 ntBASIC1.44□□□□□ -2.18
VPS11Q9H270 U6.81-201ENST00000612550 106 ntBASIC1.44□□□□□ -2.18
VPS11Q9H270 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
VPS11Q9H270 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS11Q9H270 MIR9-2-201ENST00000384838 87 ntBASIC1.43□□□□□ -2.18
VPS11Q9H270 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.43□□□□□ -2.18
VPS11Q9H270 RNU6-1052P-201ENST00000411398 104 ntBASIC1.43□□□□□ -2.18
VPS11Q9H270 AC097635.1-201ENST00000450678 155 ntBASIC1.43□□□□□ -2.18
VPS11Q9H270 RNU6-719P-201ENST00000516671 104 ntBASIC1.43□□□□□ -2.18
VPS11Q9H270 SNORA70.22-201ENST00000517160 124 ntBASIC1.43□□□□□ -2.18
VPS11Q9H270 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VPS11Q9H270 SNORD115-22-201ENST00000364456 82 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 Y_RNA.258-201ENST00000364613 105 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 SNORD116-24-201ENST00000384549 92 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 MIR599-201ENST00000385069 95 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 MIR1257-201ENST00000408490 117 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 MIR3675-201ENST00000583661 73 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
VPS11Q9H270 MIR451A-201ENST00000385059 72 ntBASIC1.41□□□□□ -2.18
VPS11Q9H270 RNU6-910P-201ENST00000390844 107 ntBASIC1.41□□□□□ -2.18
VPS11Q9H270 RNU6-935P-201ENST00000410371 100 ntBASIC1.41□□□□□ -2.18
VPS11Q9H270 RNU6-765P-201ENST00000516916 99 ntBASIC1.41□□□□□ -2.18
VPS11Q9H270 AC036111.3-201ENST00000526389 112 ntBASIC1.41□□□□□ -2.18
VPS11Q9H270 RNU7-10P-201ENST00000607194 63 ntBASIC1.41□□□□□ -2.18
VPS11Q9H270 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.41□□□□□ -2.18
VPS11Q9H270 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VPS11Q9H270 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 RNY4P3-201ENST00000365254 95 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
VPS11Q9H270 MIR125B2-201ENST00000385128 89 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VPS11Q9H270 SNORD12-201ENST00000391002 90 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 AC097510.1-201ENST00000510945 133 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
VPS11Q9H270 RNU6-369P-201ENST00000362515 102 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 RNU6-934P-201ENST00000365154 107 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 Y_RNA.363-201ENST00000365529 113 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 SNORA80D-201ENST00000384488 135 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 RNU6-630P-201ENST00000391258 106 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 SNORD79.1-201ENST00000516069 84 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 RNA5SP458-201ENST00000516188 119 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 MIR4771-2-201ENST00000577758 74 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
VPS11Q9H270 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
VPS11Q9H270 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
VPS11Q9H270 Y_RNA.443-201ENST00000384135 111 ntBASIC1.38□□□□□ -2.19
VPS11Q9H270 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
VPS11Q9H270 MIR618-201ENST00000385287 98 ntBASIC1.38□□□□□ -2.19
VPS11Q9H270 RNU7-40P-201ENST00000516397 64 ntBASIC1.38□□□□□ -2.19
VPS11Q9H270 RNU6-881P-201ENST00000516813 102 ntBASIC1.38□□□□□ -2.19
VPS11Q9H270 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS11Q9H270 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
VPS11Q9H270 SNORD45.1-201ENST00000363181 77 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms