Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SNORD38.2-201ENST00000384470 69 ntBASIC0.86□□□□□ -2.27
CDT1Q9H211 SNORD63B-201ENST00000411005 70 ntBASIC0.86□□□□□ -2.27
CDT1Q9H211 AC092628.1-201ENST00000436250 252 ntBASIC0.86□□□□□ -2.27
CDT1Q9H211 AL161932.1-201ENST00000437408 146 ntBASIC0.86□□□□□ -2.27
CDT1Q9H211 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
CDT1Q9H211 AC025627.3-201ENST00000582078 182 ntBASIC0.86□□□□□ -2.27
CDT1Q9H211 MIR4439-201ENST00000583746 80 ntBASIC0.86□□□□□ -2.27
CDT1Q9H211 Y_RNA.43-201ENST00000362670 111 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 Y_RNA.369-201ENST00000365568 117 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 RNU6-571P-201ENST00000384128 107 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 Y_RNA.536-201ENST00000384621 113 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 RNU1-119P-201ENST00000391122 165 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 RNU6-887P-201ENST00000410660 100 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 RNU7-195P-201ENST00000458793 62 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 RNU6-1194P-201ENST00000516208 104 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 SNORA31.14-201ENST00000516728 116 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 Y_RNA.697-201ENST00000516776 113 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 Y_RNA.705-201ENST00000516862 110 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 RNU6-765P-201ENST00000516916 99 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 MIR4679-1-201ENST00000637619 75 ntBASIC0.85□□□□□ -2.27
CDT1Q9H211 Y_RNA.32-201ENST00000362589 110 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 Y_RNA.56-201ENST00000362798 112 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 Y_RNA.57-201ENST00000362806 113 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 Y_RNA.115-201ENST00000363272 98 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 Y_RNA.433-201ENST00000384089 102 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 RNU6-535P-201ENST00000384722 107 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 SNORD99-201ENST00000408612 74 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 RNU6-844P-201ENST00000517175 102 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 AC026421.1-201ENST00000519101 163 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 uc_338.16-201ENST00000621804 95 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 MIR2052-201ENST00000636055 55 ntBASIC0.84□□□□□ -2.27
CDT1Q9H211 MIR101-2-201ENST00000362195 79 ntBASIC0.83□□□□□ -2.28
CDT1Q9H211 RNU6-972P-201ENST00000391208 107 ntBASIC0.83□□□□□ -2.28
CDT1Q9H211 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
CDT1Q9H211 snoU13.11-201ENST00000459219 104 ntBASIC0.83□□□□□ -2.28
CDT1Q9H211 AC002350.1-201ENST00000490759 375 ntBASIC0.83□□□□□ -2.28
CDT1Q9H211 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.83□□□□□ -2.28
CDT1Q9H211 AC010487.4-201ENST00000637027 61 ntBASIC0.83□□□□□ -2.28
CDT1Q9H211 SNORD114-23-201ENST00000363536 72 ntBASIC0.82□□□□□ -2.28
CDT1Q9H211 RNU6-294P-201ENST00000364999 102 ntBASIC0.82□□□□□ -2.28
CDT1Q9H211 MIR635-201ENST00000384830 98 ntBASIC0.82□□□□□ -2.28
CDT1Q9H211 MIR644A-201ENST00000385262 94 ntBASIC0.82□□□□□ -2.28
CDT1Q9H211 RNU7-85P-201ENST00000458851 63 ntBASIC0.82□□□□□ -2.28
CDT1Q9H211 RNU6-267P-201ENST00000516714 103 ntBASIC0.82□□□□□ -2.28
CDT1Q9H211 AL353765.1-201ENST00000605514 183 ntBASIC0.82□□□□□ -2.28
CDT1Q9H211 RNU6-1125P-201ENST00000363601 107 ntBASIC0.81□□□□□ -2.28
CDT1Q9H211 RNU6-480P-201ENST00000384332 107 ntBASIC0.81□□□□□ -2.28
CDT1Q9H211 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
CDT1Q9H211 MIR6513-201ENST00000621188 64 ntBASIC0.81□□□□□ -2.28
CDT1Q9H211 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CDT1Q9H211 RNU6-957P-201ENST00000363652 99 ntBASIC0.8□□□□□ -2.28
CDT1Q9H211 RNU6-1254P-201ENST00000391266 104 ntBASIC0.8□□□□□ -2.28
CDT1Q9H211 Y_RNA.609-201ENST00000410669 89 ntBASIC0.8□□□□□ -2.28
CDT1Q9H211 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
CDT1Q9H211 RNU6-762P-201ENST00000517107 102 ntBASIC0.8□□□□□ -2.28
CDT1Q9H211 AC011195.1-201ENST00000578177 177 ntBASIC0.8□□□□□ -2.28
CDT1Q9H211 MIR548H5-201ENST00000580314 60 ntBASIC0.8□□□□□ -2.28
CDT1Q9H211 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
CDT1Q9H211 Y_RNA.220-201ENST00000364244 109 ntBASIC0.79□□□□□ -2.28
CDT1Q9H211 Y_RNA.221-201ENST00000364248 96 ntBASIC0.79□□□□□ -2.28
CDT1Q9H211 SNORD73B-201ENST00000364394 72 ntBASIC0.79□□□□□ -2.28
CDT1Q9H211 AC244098.3-201ENST00000424803 96 ntBASIC0.79□□□□□ -2.28
CDT1Q9H211 MIR4714-201ENST00000580728 77 ntBASIC0.79□□□□□ -2.28
CDT1Q9H211 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
CDT1Q9H211 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CDT1Q9H211 MIR573-201ENST00000384964 99 ntBASIC0.78□□□□□ -2.28
CDT1Q9H211 Y_RNA.593-201ENST00000410292 98 ntBASIC0.78□□□□□ -2.28
CDT1Q9H211 RNU6-402P-201ENST00000410678 103 ntBASIC0.78□□□□□ -2.28
CDT1Q9H211 RNU6-75P-201ENST00000515944 104 ntBASIC0.78□□□□□ -2.28
CDT1Q9H211 MIR3612-201ENST00000579753 87 ntBASIC0.78□□□□□ -2.28
CDT1Q9H211 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.78□□□□□ -2.28
CDT1Q9H211 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
CDT1Q9H211 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
CDT1Q9H211 Y_RNA.17-201ENST00000362433 111 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 RNA5SP257-201ENST00000363023 116 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 SNORD116-10-201ENST00000363791 102 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 SNORD115-27-201ENST00000364430 82 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 RNU6-219P-201ENST00000364728 107 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 RNU6-524P-201ENST00000384270 107 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 MIR599-201ENST00000385069 95 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 RNU6-243P-201ENST00000391140 107 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 SNORD4B-201ENST00000459083 72 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 Y_RNA.809-201ENST00000516058 95 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 RNA5SP395-201ENST00000516567 118 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 AP003327.1-201ENST00000529684 127 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
CDT1Q9H211 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
CDT1Q9H211 MIR519A1-201ENST00000385257 85 ntBASIC0.76□□□□□ -2.29
CDT1Q9H211 AL109933.3-201ENST00000619095 188 ntBASIC0.76□□□□□ -2.29
CDT1Q9H211 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.76□□□□□ -2.29
CDT1Q9H211 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CDT1Q9H211 RNU6-1260P-201ENST00000362944 107 ntBASIC0.75□□□□□ -2.29
CDT1Q9H211 AC244505.6-201ENST00000452829 130 ntBASIC0.75□□□□□ -2.29
CDT1Q9H211 RNA5SP330-201ENST00000517096 96 ntBASIC0.75□□□□□ -2.29
CDT1Q9H211 RNU7-161P-201ENST00000517289 62 ntBASIC0.75□□□□□ -2.29
CDT1Q9H211 AC138869.1-201ENST00000568623 124 ntBASIC0.75□□□□□ -2.29
CDT1Q9H211 MIR3678-201ENST00000578455 94 ntBASIC0.75□□□□□ -2.29
CDT1Q9H211 MIR4668-201ENST00000582284 70 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms