Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNORD83.1-201ENST00000411362 77 ntBASIC2.13□□□□□ -2.07
RNF135Q8IUD6 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
RNF135Q8IUD6 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
RNF135Q8IUD6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF135Q8IUD6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RNF135Q8IUD6 SNORA25.4-201ENST00000363666 124 ntBASIC2.12□□□□□ -2.07
RNF135Q8IUD6 RNA5SP190-201ENST00000365222 118 ntBASIC2.12□□□□□ -2.07
RNF135Q8IUD6 SNORA75.2-201ENST00000391138 150 ntBASIC2.12□□□□□ -2.07
RNF135Q8IUD6 SNORA75.3-201ENST00000391231 150 ntBASIC2.12□□□□□ -2.07
RNF135Q8IUD6 SNORA31.2-201ENST00000516019 134 ntBASIC2.12□□□□□ -2.07
RNF135Q8IUD6 AC036111.3-201ENST00000526389 112 ntBASIC2.12□□□□□ -2.07
RNF135Q8IUD6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RNF135Q8IUD6 Y_RNA.13-201ENST00000362403 112 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 RNU6-934P-201ENST00000365154 107 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 Y_RNA.443-201ENST00000384135 111 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 AP1B1P2-201ENST00000416196 106 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 SNORD13-201ENST00000459299 104 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 AC097510.1-201ENST00000510945 133 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 Y_RNA.697-201ENST00000516776 113 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 MTRNR2L2-201ENST00000604882 87 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 U6.81-201ENST00000612550 106 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 MIR6082-201ENST00000613604 109 ntBASIC2.11□□□□□ -2.07
RNF135Q8IUD6 RNU6-824P-201ENST00000363724 104 ntBASIC2.1□□□□□ -2.07
RNF135Q8IUD6 AC097635.1-201ENST00000450678 155 ntBASIC2.1□□□□□ -2.07
RNF135Q8IUD6 RNU6-881P-201ENST00000516813 102 ntBASIC2.1□□□□□ -2.07
RNF135Q8IUD6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RNF135Q8IUD6 SNORD45.1-201ENST00000363181 77 ntBASIC2.09□□□□□ -2.07
RNF135Q8IUD6 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
RNF135Q8IUD6 SNORA24B-201ENST00000384176 131 ntBASIC2.09□□□□□ -2.07
RNF135Q8IUD6 RNU4-62P-201ENST00000410125 130 ntBASIC2.09□□□□□ -2.07
RNF135Q8IUD6 RNU6-935P-201ENST00000410371 100 ntBASIC2.09□□□□□ -2.07
RNF135Q8IUD6 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
RNF135Q8IUD6 MIR8053-201ENST00000613344 75 ntBASIC2.09□□□□□ -2.07
RNF135Q8IUD6 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.09□□□□□ -2.07
RNF135Q8IUD6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RNF135Q8IUD6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RNF135Q8IUD6 SNORD115-22-201ENST00000364456 82 ntBASIC2.08□□□□□ -2.08
RNF135Q8IUD6 RNU6-499P-201ENST00000365615 107 ntBASIC2.08□□□□□ -2.08
RNF135Q8IUD6 MIR7-2-201ENST00000384970 110 ntBASIC2.08□□□□□ -2.08
RNF135Q8IUD6 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
RNF135Q8IUD6 SNORA25.15-201ENST00000516487 89 ntBASIC2.08□□□□□ -2.08
RNF135Q8IUD6 Y_RNA.363-201ENST00000365529 113 ntBASIC2.07□□□□□ -2.08
RNF135Q8IUD6 MIR451A-201ENST00000385059 72 ntBASIC2.07□□□□□ -2.08
RNF135Q8IUD6 RNU6-1052P-201ENST00000411398 104 ntBASIC2.07□□□□□ -2.08
RNF135Q8IUD6 RNU6-719P-201ENST00000516671 104 ntBASIC2.07□□□□□ -2.08
RNF135Q8IUD6 RNU6-765P-201ENST00000516916 99 ntBASIC2.07□□□□□ -2.08
RNF135Q8IUD6 MIR4771-2-201ENST00000577758 74 ntBASIC2.07□□□□□ -2.08
RNF135Q8IUD6 MIR4771-1-201ENST00000582617 74 ntBASIC2.07□□□□□ -2.08
RNF135Q8IUD6 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.07□□□□□ -2.08
RNF135Q8IUD6 Y_RNA.224-201ENST00000364308 111 ntBASIC2.06□□□□□ -2.08
RNF135Q8IUD6 MIR599-201ENST00000385069 95 ntBASIC2.06□□□□□ -2.08
RNF135Q8IUD6 MIR125B2-201ENST00000385128 89 ntBASIC2.06□□□□□ -2.08
RNF135Q8IUD6 SNORD111-201ENST00000408139 94 ntBASIC2.06□□□□□ -2.08
RNF135Q8IUD6 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
RNF135Q8IUD6 RNU6-902P-201ENST00000517212 91 ntBASIC2.06□□□□□ -2.08
RNF135Q8IUD6 AC106800.4-201ENST00000614905 153 ntBASIC2.06□□□□□ -2.08
RNF135Q8IUD6 MIR934-201ENST00000401241 83 ntBASIC2.05□□□□□ -2.08
RNF135Q8IUD6 AL591704.2-201ENST00000421658 181 ntBASIC2.05□□□□□ -2.08
RNF135Q8IUD6 RNU6-1265P-201ENST00000516342 103 ntBASIC2.05□□□□□ -2.08
RNF135Q8IUD6 AC023827.1-201ENST00000569247 97 ntBASIC2.05□□□□□ -2.08
RNF135Q8IUD6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RNF135Q8IUD6 RNU6-1216P-201ENST00000362590 107 ntBASIC2.04□□□□□ -2.08
RNF135Q8IUD6 SNORD116-24-201ENST00000384549 92 ntBASIC2.04□□□□□ -2.08
RNF135Q8IUD6 RNU6-604P-201ENST00000390917 100 ntBASIC2.04□□□□□ -2.08
RNF135Q8IUD6 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
RNF135Q8IUD6 AP000553.5-201ENST00000641933 54 ntBASIC2.04□□□□□ -2.08
RNF135Q8IUD6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RNF135Q8IUD6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RNF135Q8IUD6 SNORD113.1-201ENST00000363280 73 ntBASIC2.03□□□□□ -2.08
RNF135Q8IUD6 RNA5SP338-201ENST00000410495 85 ntBASIC2.03□□□□□ -2.08
RNF135Q8IUD6 RPS26P5-201ENST00000418544 335 ntBASIC2.03□□□□□ -2.08
RNF135Q8IUD6 RNU7-21P-201ENST00000459430 62 ntBASIC2.03□□□□□ -2.08
RNF135Q8IUD6 AC138907.6-201ENST00000568401 126 ntBASIC2.03□□□□□ -2.08
RNF135Q8IUD6 AC138869.1-201ENST00000568623 124 ntBASIC2.03□□□□□ -2.08
RNF135Q8IUD6 MIR4511-201ENST00000582784 87 ntBASIC2.03□□□□□ -2.08
RNF135Q8IUD6 BX248123.2-201ENST00000606318 124 ntBASIC2.03□□□□□ -2.08
RNF135Q8IUD6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.03□□□□□ -2.08
RNF135Q8IUD6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.09
RNF135Q8IUD6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
RNF135Q8IUD6 SNORA80D-201ENST00000384488 135 ntBASIC2.02□□□□□ -2.09
RNF135Q8IUD6 AC003989.2-201ENST00000440224 169 ntBASIC2.02□□□□□ -2.09
RNF135Q8IUD6 RNU7-40P-201ENST00000516397 64 ntBASIC2.02□□□□□ -2.09
RNF135Q8IUD6 AC103706.3-201ENST00000636297 85 ntBASIC2.02□□□□□ -2.09
RNF135Q8IUD6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
RNF135Q8IUD6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
RNF135Q8IUD6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RNF135Q8IUD6 RNU6-910P-201ENST00000390844 107 ntBASIC2.01□□□□□ -2.09
RNF135Q8IUD6 MIR4773-1-201ENST00000637203 78 ntBASIC2.01□□□□□ -2.09
RNF135Q8IUD6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2□□□□□ -2.09
RNF135Q8IUD6 RNU6-1177P-201ENST00000391058 104 ntBASIC2□□□□□ -2.09
RNF135Q8IUD6 MIR4303-201ENST00000581299 66 ntBASIC2□□□□□ -2.09
RNF135Q8IUD6 MIR4676-201ENST00000583078 72 ntBASIC2□□□□□ -2.09
RNF135Q8IUD6 AC084768.2-201ENST00000622736 221 ntBASIC2□□□□□ -2.09
RNF135Q8IUD6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2□□□□□ -2.09
RNF135Q8IUD6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RNF135Q8IUD6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF135Q8IUD6 RNU7-90P-201ENST00000459216 62 ntBASIC1.99□□□□□ -2.09
RNF135Q8IUD6 RNU6-274P-201ENST00000459566 107 ntBASIC1.99□□□□□ -2.09
RNF135Q8IUD6 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 336.1 ms