Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RPS27P16-201ENST00000425758 201 ntBASIC1.53□□□□□ -2.16
YBX1P67809 AL645939.4-201ENST00000604495 135 ntBASIC1.53□□□□□ -2.16
YBX1P67809 Y_RNA.788-201ENST00000622394 112 ntBASIC1.53□□□□□ -2.16
YBX1P67809 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
YBX1P67809 RNU6-208P-201ENST00000362431 107 ntBASIC1.52□□□□□ -2.17
YBX1P67809 RNU6-1260P-201ENST00000362944 107 ntBASIC1.52□□□□□ -2.17
YBX1P67809 RNU6-364P-201ENST00000384387 107 ntBASIC1.52□□□□□ -2.17
YBX1P67809 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
YBX1P67809 RPS26P5-201ENST00000418544 335 ntBASIC1.52□□□□□ -2.17
YBX1P67809 AL606490.4-201ENST00000423117 127 ntBASIC1.52□□□□□ -2.17
YBX1P67809 SCARNA18B-201ENST00000458806 135 ntBASIC1.52□□□□□ -2.17
YBX1P67809 RNU7-40P-201ENST00000516397 64 ntBASIC1.52□□□□□ -2.17
YBX1P67809 MIR4484-201ENST00000582855 83 ntBASIC1.52□□□□□ -2.17
YBX1P67809 AC106800.4-201ENST00000614905 153 ntBASIC1.52□□□□□ -2.17
YBX1P67809 RMST_2.1-201ENST00000617263 136 ntBASIC1.52□□□□□ -2.17
YBX1P67809 MIR6734-201ENST00000621166 68 ntBASIC1.52□□□□□ -2.17
YBX1P67809 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
YBX1P67809 Y_RNA.42-201ENST00000362660 108 ntBASIC1.51□□□□□ -2.17
YBX1P67809 Y_RNA.239-201ENST00000364444 113 ntBASIC1.51□□□□□ -2.17
YBX1P67809 Y_RNA.264-201ENST00000364665 102 ntBASIC1.51□□□□□ -2.17
YBX1P67809 Y_RNA.363-201ENST00000365529 113 ntBASIC1.51□□□□□ -2.17
YBX1P67809 SNORD90-201ENST00000391145 111 ntBASIC1.51□□□□□ -2.17
YBX1P67809 AL591704.2-201ENST00000421658 181 ntBASIC1.51□□□□□ -2.17
YBX1P67809 AC138907.6-201ENST00000568401 126 ntBASIC1.51□□□□□ -2.17
YBX1P67809 AC138869.1-201ENST00000568623 124 ntBASIC1.51□□□□□ -2.17
YBX1P67809 MIR4676-201ENST00000583078 72 ntBASIC1.51□□□□□ -2.17
YBX1P67809 RNU6-448P-201ENST00000517052 107 ntBASIC1.5□□□□□ -2.17
YBX1P67809 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
YBX1P67809 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
YBX1P67809 RNU6-535P-201ENST00000384722 107 ntBASIC1.49□□□□□ -2.17
YBX1P67809 MIR599-201ENST00000385069 95 ntBASIC1.49□□□□□ -2.17
YBX1P67809 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
YBX1P67809 RNU6-910P-201ENST00000390844 107 ntBASIC1.49□□□□□ -2.17
YBX1P67809 RNU6-994P-201ENST00000410507 111 ntBASIC1.49□□□□□ -2.17
YBX1P67809 AC097635.1-201ENST00000450678 155 ntBASIC1.49□□□□□ -2.17
YBX1P67809 RNU6-807P-201ENST00000516805 107 ntBASIC1.49□□□□□ -2.17
YBX1P67809 MIR3134-201ENST00000579433 74 ntBASIC1.49□□□□□ -2.17
YBX1P67809 RNU6-664P-201ENST00000362381 107 ntBASIC1.48□□□□□ -2.17
YBX1P67809 SNORD101-201ENST00000384027 73 ntBASIC1.48□□□□□ -2.17
YBX1P67809 SNORA80D-201ENST00000384488 135 ntBASIC1.48□□□□□ -2.17
YBX1P67809 MIR938-201ENST00000401216 83 ntBASIC1.48□□□□□ -2.17
YBX1P67809 RNU7-21P-201ENST00000459430 62 ntBASIC1.48□□□□□ -2.17
YBX1P67809 AC027335.2-201ENST00000624030 375 ntBASIC1.48□□□□□ -2.17
YBX1P67809 U6.100-201ENST00000636230 99 ntBASIC1.48□□□□□ -2.17
YBX1P67809 RNA5SP325-201ENST00000363756 130 ntBASIC1.47□□□□□ -2.17
YBX1P67809 RNU6-1051P-201ENST00000365471 102 ntBASIC1.47□□□□□ -2.17
YBX1P67809 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
YBX1P67809 AC004223.1-201ENST00000479840 271 ntBASIC1.47□□□□□ -2.17
YBX1P67809 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
YBX1P67809 MIR4696-201ENST00000581431 70 ntBASIC1.47□□□□□ -2.17
YBX1P67809 MIR6779-201ENST00000617283 64 ntBASIC1.47□□□□□ -2.17
YBX1P67809 MIR1297-201ENST00000637311 77 ntBASIC1.47□□□□□ -2.17
YBX1P67809 Y_RNA.12-201ENST00000362393 112 ntBASIC1.46□□□□□ -2.18
YBX1P67809 RNU5F-1-201ENST00000362507 117 ntBASIC1.46□□□□□ -2.18
YBX1P67809 RNA5SP245-201ENST00000364239 121 ntBASIC1.46□□□□□ -2.18
YBX1P67809 RNY4P3-201ENST00000365254 95 ntBASIC1.46□□□□□ -2.18
YBX1P67809 Y_RNA.532-201ENST00000384590 113 ntBASIC1.46□□□□□ -2.18
YBX1P67809 RNU6-291P-201ENST00000384720 107 ntBASIC1.46□□□□□ -2.18
YBX1P67809 snoU13.17-201ENST00000458802 104 ntBASIC1.46□□□□□ -2.18
YBX1P67809 RNU7-102P-201ENST00000458948 62 ntBASIC1.46□□□□□ -2.18
YBX1P67809 RNU7-90P-201ENST00000459216 62 ntBASIC1.46□□□□□ -2.18
YBX1P67809 RNU6-977P-201ENST00000516411 103 ntBASIC1.46□□□□□ -2.18
YBX1P67809 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
YBX1P67809 ZNF209P-201ENST00000593450 2304 ntBASIC1.46□□□□□ -2.18
YBX1P67809 Y_RNA.207-201ENST00000364142 106 ntBASIC1.45□□□□□ -2.18
YBX1P67809 RNU6-411P-201ENST00000384451 107 ntBASIC1.45□□□□□ -2.18
YBX1P67809 MIR520H-201ENST00000385126 88 ntBASIC1.45□□□□□ -2.18
YBX1P67809 MIR100-201ENST00000385259 80 ntBASIC1.45□□□□□ -2.18
YBX1P67809 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
YBX1P67809 Y_RNA.596-201ENST00000410462 109 ntBASIC1.45□□□□□ -2.18
YBX1P67809 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.45□□□□□ -2.18
YBX1P67809 RNU6-70P-201ENST00000516438 60 ntBASIC1.45□□□□□ -2.18
YBX1P67809 RNU6-303P-201ENST00000517091 106 ntBASIC1.45□□□□□ -2.18
YBX1P67809 RNU6-788P-201ENST00000390967 104 ntBASIC1.44□□□□□ -2.18
YBX1P67809 RNU6-523P-201ENST00000516304 54 ntBASIC1.44□□□□□ -2.18
YBX1P67809 RNA5SP102-201ENST00000516865 106 ntBASIC1.44□□□□□ -2.18
YBX1P67809 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
YBX1P67809 YWHAEP2-201ENST00000580066 112 ntBASIC1.44□□□□□ -2.18
YBX1P67809 MIR4804-201ENST00000581683 73 ntBASIC1.44□□□□□ -2.18
YBX1P67809 YWHAEP3-201ENST00000582767 121 ntBASIC1.44□□□□□ -2.18
YBX1P67809 AC008608.1-201ENST00000603910 127 ntBASIC1.44□□□□□ -2.18
YBX1P67809 RNU1-119P-201ENST00000391122 165 ntBASIC1.43□□□□□ -2.18
YBX1P67809 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
YBX1P67809 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.43□□□□□ -2.18
YBX1P67809 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
YBX1P67809 SNORD79.1-201ENST00000516069 84 ntBASIC1.43□□□□□ -2.18
YBX1P67809 Y_RNA.681-201ENST00000516445 113 ntBASIC1.43□□□□□ -2.18
YBX1P67809 MIR3140-201ENST00000583685 90 ntBASIC1.43□□□□□ -2.18
YBX1P67809 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
YBX1P67809 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.43□□□□□ -2.18
YBX1P67809 MIR1-1-201ENST00000362147 71 ntBASIC1.42□□□□□ -2.18
YBX1P67809 SNORA7.1-201ENST00000363750 139 ntBASIC1.42□□□□□ -2.18
YBX1P67809 Y_RNA.371-201ENST00000365591 113 ntBASIC1.42□□□□□ -2.18
YBX1P67809 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
YBX1P67809 RNU6-369P-201ENST00000362515 102 ntBASIC1.41□□□□□ -2.18
YBX1P67809 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
YBX1P67809 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
YBX1P67809 RNU6-935P-201ENST00000410371 100 ntBASIC1.41□□□□□ -2.18
YBX1P67809 RNU6-1052P-201ENST00000411398 104 ntBASIC1.41□□□□□ -2.18
YBX1P67809 RNU7-56P-201ENST00000458744 62 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 221.6 ms