Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNU6-1110P-201ENST00000516462 101 ntBASIC1.35□□□□□ -2.19
CCNFP41002 AP003327.1-201ENST00000529684 127 ntBASIC1.35□□□□□ -2.19
CCNFP41002 SNORD115-37-201ENST00000363768 82 ntBASIC1.34□□□□□ -2.19
CCNFP41002 RNU6-1276P-201ENST00000365372 104 ntBASIC1.34□□□□□ -2.19
CCNFP41002 RNU6-1152P-201ENST00000384576 107 ntBASIC1.34□□□□□ -2.19
CCNFP41002 SNORD105-201ENST00000386910 85 ntBASIC1.34□□□□□ -2.19
CCNFP41002 AC097635.1-201ENST00000450678 155 ntBASIC1.34□□□□□ -2.19
CCNFP41002 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
CCNFP41002 Y_RNA.221-201ENST00000364248 96 ntBASIC1.33□□□□□ -2.2
CCNFP41002 SNORD114-24-201ENST00000365029 72 ntBASIC1.33□□□□□ -2.2
CCNFP41002 Y_RNA.426-201ENST00000384068 113 ntBASIC1.33□□□□□ -2.2
CCNFP41002 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
CCNFP41002 U7.7-201ENST00000459276 60 ntBASIC1.33□□□□□ -2.2
CCNFP41002 SNORA31.14-201ENST00000516728 116 ntBASIC1.33□□□□□ -2.2
CCNFP41002 Y_RNA.32-201ENST00000362589 110 ntBASIC1.32□□□□□ -2.2
CCNFP41002 RNU6-1260P-201ENST00000362944 107 ntBASIC1.32□□□□□ -2.2
CCNFP41002 RNA5SP117-201ENST00000365294 118 ntBASIC1.32□□□□□ -2.2
CCNFP41002 MIR1236-201ENST00000408340 102 ntBASIC1.32□□□□□ -2.2
CCNFP41002 AL606490.4-201ENST00000423117 127 ntBASIC1.32□□□□□ -2.2
CCNFP41002 RNU7-153P-201ENST00000516455 62 ntBASIC1.32□□□□□ -2.2
CCNFP41002 TRDV1-202ENST00000621643 102 ntBASIC1.32□□□□□ -2.2
CCNFP41002 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CCNFP41002 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.31□□□□□ -2.2
CCNFP41002 RNU6-1335P-201ENST00000365426 107 ntBASIC1.31□□□□□ -2.2
CCNFP41002 RNU6-979P-201ENST00000383896 107 ntBASIC1.31□□□□□ -2.2
CCNFP41002 MIR519A1-201ENST00000385257 85 ntBASIC1.31□□□□□ -2.2
CCNFP41002 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
CCNFP41002 MIRLET7F1-201ENST00000362202 87 ntBASIC1.3□□□□□ -2.2
CCNFP41002 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
CCNFP41002 RNU6-811P-201ENST00000384069 107 ntBASIC1.3□□□□□ -2.2
CCNFP41002 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
CCNFP41002 AC006160.2-201ENST00000637708 154 ntBASIC1.3□□□□□ -2.2
CCNFP41002 Y_RNA.437-201ENST00000384113 113 ntBASIC1.29□□□□□ -2.2
CCNFP41002 RNU6-42P-201ENST00000384165 107 ntBASIC1.29□□□□□ -2.2
CCNFP41002 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.29□□□□□ -2.2
CCNFP41002 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
CCNFP41002 AC093729.1-201ENST00000513074 128 ntBASIC1.29□□□□□ -2.2
CCNFP41002 RNU6-75P-201ENST00000515944 104 ntBASIC1.29□□□□□ -2.2
CCNFP41002 uc_338.16-201ENST00000621804 95 ntBASIC1.29□□□□□ -2.2
CCNFP41002 Y_RNA.174-201ENST00000363781 105 ntBASIC1.28□□□□□ -2.2
CCNFP41002 MIR644A-201ENST00000385262 94 ntBASIC1.28□□□□□ -2.2
CCNFP41002 RNA5SP220-201ENST00000516298 104 ntBASIC1.28□□□□□ -2.2
CCNFP41002 MIR4452-201ENST00000583004 71 ntBASIC1.28□□□□□ -2.2
CCNFP41002 SNORD115-24-201ENST00000363528 82 ntBASIC1.27□□□□□ -2.21
CCNFP41002 RNU6-132P-201ENST00000383863 107 ntBASIC1.27□□□□□ -2.21
CCNFP41002 RNU6-1124P-201ENST00000384169 107 ntBASIC1.27□□□□□ -2.21
CCNFP41002 MIR548U-201ENST00000390728 81 ntBASIC1.27□□□□□ -2.21
CCNFP41002 RNA5SP292-201ENST00000390974 118 ntBASIC1.27□□□□□ -2.21
CCNFP41002 AC002350.1-201ENST00000490759 375 ntBASIC1.27□□□□□ -2.21
CCNFP41002 RNU6-469P-201ENST00000516253 101 ntBASIC1.27□□□□□ -2.21
CCNFP41002 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
CCNFP41002 AL078603.1-201ENST00000603824 313 ntBASIC1.27□□□□□ -2.21
CCNFP41002 Y_RNA.219-201ENST00000364232 113 ntBASIC1.26□□□□□ -2.21
CCNFP41002 AC244505.6-201ENST00000452829 130 ntBASIC1.26□□□□□ -2.21
CCNFP41002 AC025627.3-201ENST00000582078 182 ntBASIC1.26□□□□□ -2.21
CCNFP41002 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
CCNFP41002 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCNFP41002 RNU7-171P-201ENST00000459581 62 ntBASIC1.25□□□□□ -2.21
CCNFP41002 SNORA18.5-201ENST00000516616 101 ntBASIC1.25□□□□□ -2.21
CCNFP41002 AC104996.3-201ENST00000590718 94 ntBASIC1.25□□□□□ -2.21
CCNFP41002 U6.100-201ENST00000636230 99 ntBASIC1.25□□□□□ -2.21
CCNFP41002 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCNFP41002 Y_RNA.491-201ENST00000384417 107 ntBASIC1.24□□□□□ -2.21
CCNFP41002 SNORD78.1-201ENST00000390866 65 ntBASIC1.24□□□□□ -2.21
CCNFP41002 Y_RNA.607-201ENST00000410597 98 ntBASIC1.24□□□□□ -2.21
CCNFP41002 RNA5SP102-201ENST00000516865 106 ntBASIC1.24□□□□□ -2.21
CCNFP41002 MIR4796-201ENST00000580742 81 ntBASIC1.24□□□□□ -2.21
CCNFP41002 MIR3064-201ENST00000581130 66 ntBASIC1.24□□□□□ -2.21
CCNFP41002 MIR6078-201ENST00000611069 100 ntBASIC1.24□□□□□ -2.21
CCNFP41002 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
CCNFP41002 Y_RNA.239-201ENST00000364444 113 ntBASIC1.23□□□□□ -2.21
CCNFP41002 RNU6-652P-201ENST00000365488 107 ntBASIC1.23□□□□□ -2.21
CCNFP41002 SNORD101-201ENST00000384027 73 ntBASIC1.23□□□□□ -2.21
CCNFP41002 MIR7-2-201ENST00000384970 110 ntBASIC1.23□□□□□ -2.21
CCNFP41002 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CCNFP41002 SNORD99-201ENST00000408612 74 ntBASIC1.23□□□□□ -2.21
CCNFP41002 RNA5SP255-201ENST00000516370 107 ntBASIC1.23□□□□□ -2.21
CCNFP41002 MIR3202-2-201ENST00000635980 79 ntBASIC1.23□□□□□ -2.21
CCNFP41002 Y_RNA.540-201ENST00000384638 111 ntBASIC1.22□□□□□ -2.21
CCNFP41002 RNU7-104P-201ENST00000459398 79 ntBASIC1.22□□□□□ -2.21
CCNFP41002 SNORA25.13-201ENST00000516395 103 ntBASIC1.22□□□□□ -2.21
CCNFP41002 AC011195.1-201ENST00000578177 177 ntBASIC1.22□□□□□ -2.21
CCNFP41002 MIR3612-201ENST00000579753 87 ntBASIC1.22□□□□□ -2.21
CCNFP41002 RNU6-664P-201ENST00000362381 107 ntBASIC1.21□□□□□ -2.22
CCNFP41002 RNU6-228P-201ENST00000362700 106 ntBASIC1.21□□□□□ -2.22
CCNFP41002 Y_RNA.313-201ENST00000365095 103 ntBASIC1.21□□□□□ -2.22
CCNFP41002 MIR573-201ENST00000384964 99 ntBASIC1.21□□□□□ -2.22
CCNFP41002 Y_RNA.596-201ENST00000410462 109 ntBASIC1.21□□□□□ -2.22
CCNFP41002 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
CCNFP41002 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CCNFP41002 MIR1255A-201ENST00000408338 113 ntBASIC1.2□□□□□ -2.22
CCNFP41002 RNU7-13P-201ENST00000516413 62 ntBASIC1.2□□□□□ -2.22
CCNFP41002 MIR4696-201ENST00000581431 70 ntBASIC1.2□□□□□ -2.22
CCNFP41002 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.2□□□□□ -2.22
CCNFP41002 MIR6734-201ENST00000621166 68 ntBASIC1.2□□□□□ -2.22
CCNFP41002 RNU6-1229P-201ENST00000364295 107 ntBASIC1.19□□□□□ -2.22
CCNFP41002 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
CCNFP41002 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.19□□□□□ -2.22
CCNFP41002 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CCNFP41002 RNA5SP225-201ENST00000410874 135 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms