Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LIG1P18858 RNU6-939P-201ENST00000384634 107 ntBASIC1.62□□□□□ -2.15
LIG1P18858 SNORD12-201ENST00000391002 90 ntBASIC1.62□□□□□ -2.15
LIG1P18858 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LIG1P18858 MIR4804-201ENST00000581683 73 ntBASIC1.62□□□□□ -2.15
LIG1P18858 RNU6-1229P-201ENST00000364295 107 ntBASIC1.61□□□□□ -2.15
LIG1P18858 RNU6-291P-201ENST00000384720 107 ntBASIC1.61□□□□□ -2.15
LIG1P18858 RNU6-380P-201ENST00000410207 107 ntBASIC1.61□□□□□ -2.15
LIG1P18858 RNU7-56P-201ENST00000458744 62 ntBASIC1.61□□□□□ -2.15
LIG1P18858 RNU7-102P-201ENST00000458948 62 ntBASIC1.61□□□□□ -2.15
LIG1P18858 SNORA70.22-201ENST00000517160 124 ntBASIC1.61□□□□□ -2.15
LIG1P18858 MIR4498-201ENST00000577599 66 ntBASIC1.61□□□□□ -2.15
LIG1P18858 MTRNR2L2-201ENST00000604882 87 ntBASIC1.61□□□□□ -2.15
LIG1P18858 U7.4-201ENST00000614961 63 ntBASIC1.61□□□□□ -2.15
LIG1P18858 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
LIG1P18858 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIG1P18858 RNU6-161P-201ENST00000363051 106 ntBASIC1.6□□□□□ -2.15
LIG1P18858 RNU6-535P-201ENST00000384722 107 ntBASIC1.6□□□□□ -2.15
LIG1P18858 MIR599-201ENST00000385069 95 ntBASIC1.6□□□□□ -2.15
LIG1P18858 RNU6-994P-201ENST00000410507 111 ntBASIC1.6□□□□□ -2.15
LIG1P18858 AL606490.4-201ENST00000423117 127 ntBASIC1.6□□□□□ -2.15
LIG1P18858 RNU7-95P-201ENST00000459222 64 ntBASIC1.6□□□□□ -2.15
LIG1P18858 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
LIG1P18858 AL359821.1-201ENST00000605519 182 ntBASIC1.6□□□□□ -2.15
LIG1P18858 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
LIG1P18858 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LIG1P18858 Y_RNA.239-201ENST00000364444 113 ntBASIC1.59□□□□□ -2.15
LIG1P18858 MIR520H-201ENST00000385126 88 ntBASIC1.59□□□□□ -2.15
LIG1P18858 RNU6-977P-201ENST00000516411 103 ntBASIC1.59□□□□□ -2.15
LIG1P18858 MIR4696-201ENST00000581431 70 ntBASIC1.59□□□□□ -2.15
LIG1P18858 ZNF209P-201ENST00000593450 2304 ntBASIC1.58□□□□□ -2.16
LIG1P18858 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LIG1P18858 MIR1-1-201ENST00000362147 71 ntBASIC1.58□□□□□ -2.16
LIG1P18858 RNU6-664P-201ENST00000362381 107 ntBASIC1.58□□□□□ -2.16
LIG1P18858 RNA5SP245-201ENST00000364239 121 ntBASIC1.58□□□□□ -2.16
LIG1P18858 Y_RNA.264-201ENST00000364665 102 ntBASIC1.58□□□□□ -2.16
LIG1P18858 SNORD77.2-201ENST00000391045 68 ntBASIC1.58□□□□□ -2.16
LIG1P18858 AP1B1P2-201ENST00000416196 106 ntBASIC1.58□□□□□ -2.16
LIG1P18858 AC244505.6-201ENST00000452829 130 ntBASIC1.58□□□□□ -2.16
LIG1P18858 RNU6-1265P-201ENST00000516342 103 ntBASIC1.58□□□□□ -2.16
LIG1P18858 AC008608.1-201ENST00000603910 127 ntBASIC1.58□□□□□ -2.16
LIG1P18858 snoU13.31-201ENST00000607291 104 ntBASIC1.58□□□□□ -2.16
LIG1P18858 SNORD101-201ENST00000384027 73 ntBASIC1.57□□□□□ -2.16
LIG1P18858 MIR100-201ENST00000385259 80 ntBASIC1.57□□□□□ -2.16
LIG1P18858 RNU1-119P-201ENST00000391122 165 ntBASIC1.57□□□□□ -2.16
LIG1P18858 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
LIG1P18858 RNU6-1108P-201ENST00000516308 104 ntBASIC1.57□□□□□ -2.16
LIG1P18858 U6.100-201ENST00000636230 99 ntBASIC1.57□□□□□ -2.16
LIG1P18858 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
LIG1P18858 MIR618-201ENST00000385287 98 ntBASIC1.56□□□□□ -2.16
LIG1P18858 MIR889-201ENST00000401280 79 ntBASIC1.56□□□□□ -2.16
LIG1P18858 MIR1827-201ENST00000408549 66 ntBASIC1.56□□□□□ -2.16
LIG1P18858 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.56□□□□□ -2.16
LIG1P18858 Y_RNA.596-201ENST00000410462 109 ntBASIC1.56□□□□□ -2.16
LIG1P18858 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.56□□□□□ -2.16
LIG1P18858 RNU6-1051P-201ENST00000365471 102 ntBASIC1.55□□□□□ -2.16
LIG1P18858 SNORD90-201ENST00000391145 111 ntBASIC1.55□□□□□ -2.16
LIG1P18858 AC073261.1-201ENST00000429409 121 ntBASIC1.55□□□□□ -2.16
LIG1P18858 AC067940.1-201ENST00000458411 300 ntBASIC1.55□□□□□ -2.16
LIG1P18858 MIR4781-201ENST00000585250 76 ntBASIC1.55□□□□□ -2.16
LIG1P18858 RNU6-208P-201ENST00000362431 107 ntBASIC1.54□□□□□ -2.16
LIG1P18858 MIR758-201ENST00000390227 88 ntBASIC1.54□□□□□ -2.16
LIG1P18858 AC002429.1-201ENST00000437672 148 ntBASIC1.54□□□□□ -2.16
LIG1P18858 AL157834.3-201ENST00000615543 103 ntBASIC1.54□□□□□ -2.16
LIG1P18858 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LIG1P18858 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
LIG1P18858 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.53□□□□□ -2.16
LIG1P18858 MIR4421-201ENST00000578133 69 ntBASIC1.53□□□□□ -2.16
LIG1P18858 uc_338.16-201ENST00000621804 95 ntBASIC1.53□□□□□ -2.16
LIG1P18858 Y_RNA.174-201ENST00000363781 105 ntBASIC1.52□□□□□ -2.17
LIG1P18858 RNY4P3-201ENST00000365254 95 ntBASIC1.52□□□□□ -2.17
LIG1P18858 MIR520F-201ENST00000384824 87 ntBASIC1.52□□□□□ -2.17
LIG1P18858 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.52□□□□□ -2.17
LIG1P18858 MIR1297-201ENST00000637311 77 ntBASIC1.52□□□□□ -2.17
LIG1P18858 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LIG1P18858 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LIG1P18858 SNORA25-201ENST00000384384 134 ntBASIC1.51□□□□□ -2.17
LIG1P18858 Y_RNA.545-201ENST00000384652 105 ntBASIC1.51□□□□□ -2.17
LIG1P18858 RNU6-807P-201ENST00000516805 107 ntBASIC1.51□□□□□ -2.17
LIG1P18858 RMST_2.1-201ENST00000617263 136 ntBASIC1.51□□□□□ -2.17
LIG1P18858 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.51□□□□□ -2.17
LIG1P18858 RNU5F-1-201ENST00000362507 117 ntBASIC1.5□□□□□ -2.17
LIG1P18858 Y_RNA.532-201ENST00000384590 113 ntBASIC1.5□□□□□ -2.17
LIG1P18858 Y_RNA.565-201ENST00000384719 101 ntBASIC1.5□□□□□ -2.17
LIG1P18858 RNU6-935P-201ENST00000410371 100 ntBASIC1.5□□□□□ -2.17
LIG1P18858 snoU13.17-201ENST00000458802 104 ntBASIC1.5□□□□□ -2.17
LIG1P18858 YWHAEP2-201ENST00000580066 112 ntBASIC1.5□□□□□ -2.17
LIG1P18858 YWHAEP3-201ENST00000582767 121 ntBASIC1.5□□□□□ -2.17
LIG1P18858 Y_RNA.207-201ENST00000364142 106 ntBASIC1.49□□□□□ -2.17
LIG1P18858 MIR222-201ENST00000384992 110 ntBASIC1.49□□□□□ -2.17
LIG1P18858 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LIG1P18858 AC074348.1-201ENST00000426503 132 ntBASIC1.49□□□□□ -2.17
LIG1P18858 SCARNA18B-201ENST00000458806 135 ntBASIC1.49□□□□□ -2.17
LIG1P18858 AC004223.1-201ENST00000479840 271 ntBASIC1.49□□□□□ -2.17
LIG1P18858 SNORA31.14-201ENST00000516728 116 ntBASIC1.49□□□□□ -2.17
LIG1P18858 RNU6-303P-201ENST00000517091 106 ntBASIC1.49□□□□□ -2.17
LIG1P18858 Y_RNA.788-201ENST00000622394 112 ntBASIC1.49□□□□□ -2.17
LIG1P18858 Y_RNA.32-201ENST00000362589 110 ntBASIC1.48□□□□□ -2.17
LIG1P18858 SNORD115-44-201ENST00000365391 82 ntBASIC1.48□□□□□ -2.17
LIG1P18858 MIR1287-201ENST00000408492 90 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms