Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SPINT5P-201ENST00000448174 155 ntBASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 SNRPGP12-201ENST00000449481 213 ntBASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 SNORA31.14-201ENST00000516728 116 ntBASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 AC141557.1-201ENST00000540982 400 ntBASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR3678-201ENST00000578455 94 ntBASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.81□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-170P-201ENST00000362832 104 ntBASIC0.81□□□□□ -2.28
PCDHGA3Q9Y5H0 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR1302-5-201ENST00000408164 150 ntBASIC0.81□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR548G-201ENST00000408442 89 ntBASIC0.81□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-1006P-201ENST00000516998 103 ntBASIC0.81□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR6129-201ENST00000616087 109 ntBASIC0.81□□□□□ -2.28
PCDHGA3Q9Y5H0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-832P-201ENST00000363319 107 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-1229P-201ENST00000364295 107 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-1113P-201ENST00000384348 107 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR519A1-201ENST00000385257 85 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR140-201ENST00000385282 100 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 BX276092.1-201ENST00000427368 251 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 AC092628.1-201ENST00000436250 252 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 AL353813.1-201ENST00000440700 253 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 RNA5SP436-201ENST00000516020 115 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-589P-201ENST00000516485 107 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR4439-201ENST00000583746 80 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
PCDHGA3Q9Y5H0 Y_RNA.78-201ENST00000362970 110 ntBASIC0.79□□□□□ -2.28
PCDHGA3Q9Y5H0 Y_RNA.342-201ENST00000365352 113 ntBASIC0.79□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR577-201ENST00000385196 96 ntBASIC0.79□□□□□ -2.28
PCDHGA3Q9Y5H0 AC244505.6-201ENST00000452829 130 ntBASIC0.79□□□□□ -2.28
PCDHGA3Q9Y5H0 MIR4639-201ENST00000584938 69 ntBASIC0.79□□□□□ -2.28
PCDHGA3Q9Y5H0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.79□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-1099P-201ENST00000363533 107 ntBASIC0.78□□□□□ -2.28
PCDHGA3Q9Y5H0 SNORD45B-201ENST00000364617 72 ntBASIC0.78□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-850P-201ENST00000516934 103 ntBASIC0.78□□□□□ -2.28
PCDHGA3Q9Y5H0 Y_RNA.709-201ENST00000516952 92 ntBASIC0.78□□□□□ -2.28
PCDHGA3Q9Y5H0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.78□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-1290P-201ENST00000362957 109 ntBASIC0.77□□□□□ -2.29
PCDHGA3Q9Y5H0 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
PCDHGA3Q9Y5H0 AC097635.1-201ENST00000450678 155 ntBASIC0.77□□□□□ -2.29
PCDHGA3Q9Y5H0 MIR6779-201ENST00000617283 64 ntBASIC0.77□□□□□ -2.29
PCDHGA3Q9Y5H0 RNU6-1125P-201ENST00000363601 107 ntBASIC0.76□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.173-201ENST00000363776 113 ntBASIC0.76□□□□□ -2.29
PCDHGA3Q9Y5H0 RNU6-1325P-201ENST00000364905 105 ntBASIC0.76□□□□□ -2.29
PCDHGA3Q9Y5H0 RNU6-480P-201ENST00000384332 107 ntBASIC0.76□□□□□ -2.29
PCDHGA3Q9Y5H0 MIR644A-201ENST00000385262 94 ntBASIC0.76□□□□□ -2.29
PCDHGA3Q9Y5H0 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
PCDHGA3Q9Y5H0 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
PCDHGA3Q9Y5H0 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
PCDHGA3Q9Y5H0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.601-201ENST00000410500 113 ntBASIC0.75□□□□□ -2.29
PCDHGA3Q9Y5H0 SNORD63B-201ENST00000411005 70 ntBASIC0.75□□□□□ -2.29
PCDHGA3Q9Y5H0 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
PCDHGA3Q9Y5H0 RN7SL793P-201ENST00000583259 296 ntBASIC0.75□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.163-201ENST00000363702 113 ntBASIC0.74□□□□□ -2.29
PCDHGA3Q9Y5H0 SNORD18A-201ENST00000363753 72 ntBASIC0.74□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.74□□□□□ -2.29
PCDHGA3Q9Y5H0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
PCDHGA3Q9Y5H0 TRAJ51-201ENST00000504127 63 ntBASIC0.74□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.659-201ENST00000515994 113 ntBASIC0.74□□□□□ -2.29
PCDHGA3Q9Y5H0 AC092634.7-201ENST00000621022 103 ntBASIC0.74□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.96-201ENST00000363092 109 ntBASIC0.73□□□□□ -2.29
PCDHGA3Q9Y5H0 SNORD28-201ENST00000384706 75 ntBASIC0.73□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.809-201ENST00000516058 95 ntBASIC0.73□□□□□ -2.29
PCDHGA3Q9Y5H0 RNA5SP94-201ENST00000516917 108 ntBASIC0.73□□□□□ -2.29
PCDHGA3Q9Y5H0 MIR6513-201ENST00000621188 64 ntBASIC0.73□□□□□ -2.29
PCDHGA3Q9Y5H0 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.72□□□□□ -2.29
PCDHGA3Q9Y5H0 RNU6-1260P-201ENST00000362944 107 ntBASIC0.72□□□□□ -2.29
PCDHGA3Q9Y5H0 RNA5SP245-201ENST00000364239 121 ntBASIC0.72□□□□□ -2.29
PCDHGA3Q9Y5H0 Y_RNA.247-201ENST00000364500 92 ntBASIC0.72□□□□□ -2.29
PCDHGA3Q9Y5H0 MIR216A-201ENST00000385063 110 ntBASIC0.72□□□□□ -2.29
PCDHGA3Q9Y5H0 MIR599-201ENST00000385069 95 ntBASIC0.72□□□□□ -2.29
PCDHGA3Q9Y5H0 RNU6-1254P-201ENST00000391266 104 ntBASIC0.72□□□□□ -2.29
PCDHGA3Q9Y5H0 RN7SKP12-201ENST00000516275 143 ntBASIC0.71□□□□□ -2.3
PCDHGA3Q9Y5H0 RNA5SP121-201ENST00000516537 101 ntBASIC0.71□□□□□ -2.3
PCDHGA3Q9Y5H0 SCARNA16.5-201ENST00000517114 183 ntBASIC0.71□□□□□ -2.3
PCDHGA3Q9Y5H0 RNA5SP47-201ENST00000517230 109 ntBASIC0.71□□□□□ -2.3
PCDHGA3Q9Y5H0 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
PCDHGA3Q9Y5H0 SNORD115-24-201ENST00000363528 82 ntBASIC0.7□□□□□ -2.3
PCDHGA3Q9Y5H0 RNU6-243P-201ENST00000391140 107 ntBASIC0.7□□□□□ -2.3
PCDHGA3Q9Y5H0 SNORD71-201ENST00000411292 86 ntBASIC0.7□□□□□ -2.3
PCDHGA3Q9Y5H0 RNU6-919P-201ENST00000516731 104 ntBASIC0.7□□□□□ -2.3
PCDHGA3Q9Y5H0 AC091304.10-201ENST00000641554 121 ntBASIC0.7□□□□□ -2.3
PCDHGA3Q9Y5H0 AC244669.1-204ENST00000621564 178 ntBASIC0.69□□□□□ -2.3
PCDHGA3Q9Y5H0 MIR6828-201ENST00000636181 60 ntBASIC0.69□□□□□ -2.3
PCDHGA3Q9Y5H0 Y_RNA.95-201ENST00000363079 95 ntBASIC0.68□□□□□ -2.3
PCDHGA3Q9Y5H0 RNU6-1163P-201ENST00000364516 107 ntBASIC0.68□□□□□ -2.3
PCDHGA3Q9Y5H0 RNU6-106P-201ENST00000384405 107 ntBASIC0.68□□□□□ -2.3
PCDHGA3Q9Y5H0 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
PCDHGA3Q9Y5H0 SNORA40.8-201ENST00000411034 126 ntBASIC0.68□□□□□ -2.3
PCDHGA3Q9Y5H0 RNU7-195P-201ENST00000458793 62 ntBASIC0.68□□□□□ -2.3
PCDHGA3Q9Y5H0 SCARNA23-201ENST00000516060 130 ntBASIC0.68□□□□□ -2.3
PCDHGA3Q9Y5H0 RNU6-904P-201ENST00000516206 101 ntBASIC0.68□□□□□ -2.3
PCDHGA3Q9Y5H0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.67□□□□□ -2.3
PCDHGA3Q9Y5H0 RNU6-215P-201ENST00000365169 102 ntBASIC0.67□□□□□ -2.3
PCDHGA3Q9Y5H0 SNORA51.5-201ENST00000384126 131 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms